| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5045679 | 0 (0.000) | 51 (1.510) | 42/286 | 0.0 | 100% | intergenic (‑46/+47) | PP_4449/PP_5682 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | 5222582 = | NA (NA) | coding (8/840 nt) | PP_4602 | AraC family transcriptional regulator | |||||
TCACCTCCTCCGCGCTTTTTGCTGAGCTGATGTCCTTAATGCGCATCAGCGCCTTTTCAATTACCCGCGCCTTGTCCAAGTGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTCTCATGAAGCTGAAAACGTGCATAGCCACTCTCAAGCCTTCACATGCTAATGAGCTACCTCGGAGGGGCCGCCCATTGCCCTAAGCTGGTAATCAGTAACTGCTTGGAAGCGGTGCTCAGCCATCAGCCCCAATCGCTCAAGTTCAA > NC_002947/5045534‑5045826 | tCACCTCCTCCGCGCTTTTTGCTGAGCTGATGTCCTTAATGCGCATCAGCGCCTTTTCAATTACCCGCGCCTTGTCCAAGTGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtc > 6:168473‑M1/1‑146 (MQ=255) ctcctcCGCGCTTTTTGCTGAGCTGATGTCCTTAATGCGCATCAGCGCCTTTTCAATTACCCGCGCCTTGTCCAAGTGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatc < 4:95452‑M1/148‑7 (MQ=255) tccGCGCTTTTTGCTGAGCTGATGTCCTTAATGCGCATCAGCGCCTTTTCAATTACCCGCGCCTTGTCCAAGTGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaa > 3:121940‑M1/1‑138 (MQ=255) tccGCGCTTTTTGCTGAGCTGATGTCCTTAATGCGCATCAGCGCCTTTTCAATTACCCGCGCCTTGTCCAAGTGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaa > 7:177081‑M1/1‑138 (MQ=255) tccGCGCTTTTTGCTGAGCTGATGTCCTTAATGCGCATCAGCGCCTTTTCAATTACCCGCGCCTTGTCCAAGTGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaa > 2:103278‑M1/1‑138 (MQ=255) caaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATGAAGCTGaaa < 5:32396‑M1/17‑1 (MQ=255) ttGCTGAGCTGATGTCCTTAATGCGCATCAGCGCATTTTCAATTACCCGCGCCTTGTCCAAGTGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataa < 7:90575‑M1/147‑20 (MQ=255) tcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATGAAGCTGAAAACGTGCa > 6:126962‑M1/124‑147 (MQ=255) aTGTCCTTAATGCGCATCAGCGCCTTTTCAATTACCCGCGCCTTGTCCAAGTGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctt > 4:113521‑M1/1‑117 (MQ=255) ccTTAATGCGCATCAGCGCCTTTTCAATTACCCGCGCCTTGTCCAAGTGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttcta < 5:18826‑M1/148‑36 (MQ=255) ccTTAATGCGCATCAGCGCCTTTTCAATTACCCGCGCCTTGTCCAAGTGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttcta < 1:4860‑M1/148‑36 (MQ=255) ccTTAATGCGCATCAGCGCCTTTTCAATTACCCGCGCCTTGTCCAAGTGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttcta < 5:60599‑M1/148‑36 (MQ=255) ccTTAATGCGCATCAGCGCCTTTTCAATTACCCGCGCCTTGTCCAAGTGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttcta < 6:3085‑M1/148‑36 (MQ=255) cTTAATGCGCATCAGCGCCTTTTCAATTACCCGCGCCTTGTCCAAGTGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctag > 4:45151‑M1/1‑112 (MQ=255) ttAATGCGCATCAGCGCCTTTTCAATTACCCGCGCCTTGTCCAAGTGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctag > 6:50920‑M1/1‑111 (MQ=255) gatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATGAAGCTGAAAACGTGCATAGCCACTCTCAAGCCTTca > 1:119842‑M1/105‑148 (MQ=255) cATCAGCGCCTTTTCAATTACCCGCGCCTTGTCCAAGTGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaa < 1:37843‑M1/148‑46 (MQ=255) aTCAGCGCCTTTTCAATTACCCGCGCCTTGTCCAAGTGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaac < 6:74375‑M1/148‑47 (MQ=255) gtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATGAAGCTGAAAACGTGCATAGCCACTCTCAAGCCTTCACATg < 6:55228‑M1/48‑1 (MQ=255) cAGCGCCTTTTCAATTACCCGCGCCTTGTCCAAGTGCTCGGCAACTAAAGCCATGACATTCGTCGTTGTGCGTTGATTTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacag < 2:107402‑M1/148‑49 (MQ=255) gcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATGAAGCTGAAAACGTGCATAGCCACTCTCAAGCCTTCACATGCTaa > 1:50409‑M1/96‑147 (MQ=255) gcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATGAAGCTGAAAACGTGCATAGCCACTCTCAAGCCTTCACATGCTAAt > 2:107028‑M1/96‑148 (MQ=255) cgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATGAAGCTGAAAACGTGCATAGCCACTCTCAAGCCTTCACATGCTAATg > 8:60861‑M1/95‑148 (MQ=255) gaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATGAAGCTGAAAACGTGCATAGCCACTCTCAAGCCTTCACATGCTAATGa > 6:107205‑M1/94‑148 (MQ=255) tCAATTACCCGCGCCTTGTCCAAGTGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcgggg > 1:174595‑M1/1‑90 (MQ=255) tCAATTACCCGCGCCTTGGCCAAGTGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggg < 4:152922‑M1/147‑58 (MQ=255) ttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATGAAGCTGAAAACGTGCATAGCCACTCTCAAGCCTTCACATGCTAATGAGCTAcc > 6:9156‑M1/88‑148 (MQ=255) ttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATGAAGCTGAAAACGTGCATAGCCACTCTCAAGCCTTCACATGCTAATGAGCTAcc < 7:129935‑M1/61‑1 (MQ=255) ttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATGAAGCTGAAAACGTGCATAGCCACTCTCAAGCCTTCACATGCTAATGAGCTAcc < 1:154201‑M1/61‑1 (MQ=255) cAATTACCCGCGCCTTGTCCAAGTGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcgggg > 5:174136‑M1/1‑89 (MQ=255) cAATTACCCGCGCCTTGTCCAAGTGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcgggg < 5:142729‑M1/147‑59 (MQ=255) ttACCCGCGCCTTGTCCAAGTGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggagtcaa > 4:122341‑M1/1‑86 (MQ=255) tACCCGCGCCTTGTCCAAGTGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaat < 8:76451‑M1/148‑64 (MQ=255) tACCCGCGCCTTGTCCAAGTGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaat < 8:177081‑M1/148‑64 (MQ=255) cccGCGCCTTGTCCAAGTGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatgg > 7:170633‑M1/1‑83 (MQ=255) cccGCGCCTTGTCCAAGTGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatg < 1:103278‑M1/147‑65 (MQ=255) cgcgCCTTGTCCAAGTGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcg < 8:129175‑M1/148‑68 (MQ=255) atctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATGAAGCTGAAAACGTGCATAGCCACTCTCAAGCCTTCACATGCTAATGAGCTACCTCGGAggg > 8:32363‑M1/80‑148 (MQ=255) tctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcacggaagggctgggtgatCTCTCATGAAGCTCAAAACGTGCATAGCCACTCTCAAGCCTTCACATGCTAATGAGCTACCTCGGAgggg < 7:61030‑M1/70‑1 (MQ=255) gatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATGAAGCTGAAAACGTGCATAGCCACTCTCAAGCCTTCACATGCTAATGAGCTACCTCGGAGGGgccgc < 4:163732‑M1/74‑1 (MQ=255) gatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATGAAGCTGAAAACGTGCATAGCCACTCTCAAGCCTTCACATGCTAATGAGCTACCTCGGAGGGgccgc < 3:170606‑M1/74‑1 (MQ=255) cTTGTCCAAGTGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaa < 6:191847‑M1/148‑73 (MQ=255) ttGTCCAAGTGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaag > 2:188579‑M1/1‑75 (MQ=255) ggcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATGAAGCTGAAAACGTGCATAGCCACTCTCAAGCCTTCACATGCTAATGAGCTACCTCGGAGGGGCCGCCCa > 2:42851‑M1/72‑148 (MQ=255) cAAGTGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttc > 2:14867‑M1/1‑70 (MQ=255) aaGTGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttca > 5:7617‑M1/1‑69 (MQ=255) tGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactc < 1:71933‑M1/148‑83 (MQ=255) agatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATGAAGCTGAAAACGTGCATAGCCACTCTCAAGCCTTCACATGCTAATGAGCTACCTCGGAGGGGCCGCCCATTGccc < 8:7461‑M1/83‑1 (MQ=255) tCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttc < 8:147124‑M1/148‑86 (MQ=255) gTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttct > 4:74800‑M1/1‑61 (MQ=255) tCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctat < 3:45151‑M1/148‑89 (MQ=255) cgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATGAAGCTGAAAACGTGCATAGCCACTCTCAAGCCTTCACATGCTAATGAGCTACCTCGGAGGGGCCGCCCATTGCCCTAAGCTg > 3:163732‑M1/56‑145 (MQ=255) cTAAAGCCCTGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgt < 7:29653‑M1/148‑93 (MQ=255) cTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgt < 5:180927‑M1/148‑93 (MQ=255) tcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATGAAGCTGAAAACGTGCATAGCCACTCTCAAGCCTTCACATGCTAATGAGCTACCTCGGAGGGGCCGCCCATTGCCCTAAGCTGGTAAt > 5:55228‑M1/54‑148 (MQ=255) tcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATGAAGCTGAAAACGTGCATAGCCACTCTCAAGCCTTCACATGCTAATGAGCTACCTCGGAGGGGCCGCCCATTGCCCTAAGCTGGTAAt > 2:191989‑M1/54‑148 (MQ=255) tgcgcatcctgtttgctgtgcgacagcgcagcccggatgggctgggtgatCTCTCATGAAGCTGAAAACGTGCATATCCACTCTCAAGCCTTCACATGCTAATGAGCTACCTCGGAGGGGCCGCCCATTGCCCTAAGCTGGTAATCa > 2:96075‑M1/51‑147 (MQ=255) ccATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtc > 3:182355‑M1/1‑50 (MQ=255) cctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATGAAGCTGAAAACGTGCTTAGCCACTCTCAAGCCTTCACATGCTAATGAGCTACCTCGGAGGGGCCGCCCATTGCCCTAAGCTGGTAATCAGTAACTGc < 7:49485‑M1/105‑1 (MQ=255) ctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATGAAGCTGAAAACGTGCATAGCCACTCTCAAGCCTTCACATGCTAATGAGCTACCTCGGAGGGGCCGCCCATTGCCCTAAGCTGGTAATCAGTAACTGCt < 2:193588‑M1/106‑1 (MQ=255) cATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagtgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaa < 1:176649‑M1/147‑104 (MQ=255) cATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaag > 1:146786‑M1/1‑44 (MQ=255) cATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaa < 7:119725‑M1/147‑104 (MQ=255) ttCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagct < 6:7617‑M1/148‑107 (MQ=255) gctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATGAAGCTGAAAACGTGCATAGCCACTCTCAAGCCTTCACATGCTAATGAGCTACCTCGGAGGGGCCGCCCATTGCCCTAAGCTGGTAATCAGTAACTGCTTGGaa > 8:129935‑M1/37‑147 (MQ=255) gacagcgcagcccggaagggctgggtgatCTCTCATGAAGCTGAAAACGTGCATAGCCACTCTCAAGCCTTCACATGCTAATGAGCTACCTCGGAGGGGCCGCCCATTGCCCTAAGCTGGTAATCAGTAACTGCTTGGAAGCggtcc < 8:51035‑M1/118‑3 (MQ=255) gTTGAATTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacaggg < 4:107704‑M1/147‑119 (MQ=255) cagcgcagcccggaagggctgggtgatCTCTCATGAAGCTGAAAACGTGCATAGCCACTCTCAAGCCTTCACATGCTAATGAGCTACCTCGGAGGGGCCGCCCATTGCCCTAAGCTGGTAATCAGTAACTGCTTGGAAGCGGTGCTCa > 5:47040‑M1/28‑148 (MQ=255) aTTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagatactccactgttctttctagcgacaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtgggcacagcaagctgtgccgacagggattaa < 4:7333‑M1/147‑124 (MQ=255) aTTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtctatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaac > 8:18282‑M1/1‑24 (MQ=255) aTTGTGAGCCTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaac < 4:176438‑M1/148‑125 (MQ=255) agcccggaagggctgggtgatCTCTCATGAAGCTGAAAACGTGCATAGCCACTCTCAAGCCTTCACATGCTAATGAGCTACCTCGGAGGGGCCGCCCATTGCCCTAAGCTGGTAATCAGTAACTGCTTGGAAGCGGTGCTCAGCCATc > 7:137862‑M1/22‑148 (MQ=255) gCCTTCAGGTAGCCCCTtctatcaaacaaaagatcacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtggtcactcttctatacgtggtcacagcaagctgtgccgccagggattaacgccgagg > 8:178318‑M1/1‑17 (MQ=255) gCCGTCAGGTAGCCCCTtctatcaaacaaaagctaacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgacgggttcactcttctatacgtggtcacagcacgctgtgccgaccgggattaacgccgatg > 8:175910‑M1/1‑17 (MQ=255) ccTTCAGGTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatg > 4:175942‑M1/1‑16 (MQ=255) gggctgggtgatCTCTCATGAAGCTGAAAACGTGCTTAGCCACTCTCAAGCCTTCACATGCTAATGAGCTACCTCGGAGGGGCCGCCCATTGCCCTAAGCTGGTAATCAGTAACTGCTTGGAAGCGGTGCTCAGCCATCAGCCCCAAt > 8:49485‑M1/13‑148 (MQ=255) ctgggtgatCTCTCATGAAGCTGAAAACGTGCATAGCCACTCTCAAGCCTTCACATGCTAATGAGCTACCTCGGAGGGGCCGCCCATTGCCCTAAGCTGGTAATCAGTAACTGCTTGGAAGCGGTGCTCAGCCATCAGCCCCAATCGc > 8:25584‑M1/10‑148 (MQ=255) gTAGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgg > 1:9459‑M1/1‑9 (MQ=255) acgtcacttctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttggg > 4:10881‑M1/7‑8 (MQ=255) gtgatCTCTCATGAAGCTGAAAACGTGCATAGCCACTCTCAAGCCTTCACATGCTAATGAGCTACCTCGGAGGGGCCGCCCATTGCCCTAAGCTGGTAATCAGTAACTGCTTGGAAGCGGTGCTCAGCCATCAGCCCCAATCGCTCaa > 2:140051‑M1/6‑148 (MQ=255) gccagattctagcaaacaaaagataaccacctgttctttctagagaaaaaaacaggcgcgaggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggc < 4:113751‑M1/142‑142 (MQ=255) aGCCCCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggc < 6:168386‑M1/148‑142 (MQ=255) ttatCTCTAATGAAGCTGAAAACGTGCATAGCCACTCTCTCGCCTTCACATGCTAATGAGCTACCTCGGAGGGGCCGCCCATTGCCCTACGCTGGTAATCAGTAACTGCTTGGAACCGGTGCTCAGCCATCAGCCCCAATCGCTCAAg > 1:187440‑M1/5‑148 (MQ=255) gtcacttctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggcc > 2:77219‑M1/5‑6 (MQ=255) ccTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagg < 4:83287‑M1/120‑118 (MQ=255) CTCTCATGAAGCTGAAAACGTGCATAGCCACTCTCAAGCCTTCACATGCTAATGAGCTACCTCGGAGGGGCCGCCCATTGCCCTa < 2:193210‑M1/85‑1 (MQ=255) ttctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatgtcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacatggattaacgccgatgccatttgggccactct > 6:158784‑M1/1‑1 (MQ=255) ttctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggccactct > 7:60401‑M1/1‑1 (MQ=255) ttctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggccactct > 5:111417‑M1/1‑1 (MQ=255) TCTCATGAAGCTGAAAACGTGCATAGCCACTCTCAAGCCTTCACATGCTAATGAGCTACCTCGGAGGGGCCGCCCATTGCCCTaa > 1:193210‑M1/1‑85 (MQ=255) TCTCATGAAGCTGAAAACGTGCATAGCCACTCTCAAGCCTTCACATGCTAATGAGCTACCTCGGAGGGGCCGCCCATTGCCCTAAGCTGGTAATCAGTAACTGCTTGGAAGCGGTGCTCAGCCATCAGCCCCAATCGCTCAAGTTCaa < 5:177234‑M1/148‑1 (MQ=255) | TCACCTCCTCCGCGCTTTTTGCTGAGCTGATGTCCTTAATGCGCATCAGCGCCTTTTCAATTACCCGCGCCTTGTCCAAGTGCTCGTCAACTAAAGCCATGACATTCGTCCTTGTGCGTTGAATTGTGAGCCTTCAGGTAGCCCCTCTCATGAAGCTGAAAACGTGCATAGCCACTCTCAAGCCTTCACATGCTAATGAGCTACCTCGGAGGGGCCGCCCATTGCCCTAAGCTGGTAATCAGTAACTGCTTGGAAGCGGTGCTCAGCCATCAGCCCCAATCGCTCAAGTTCAA > NC_002947/5045534‑5045826 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |