| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 247985 = | 57 (0.920) | 3 (0.050) | 3/246 | NT | 5.9% | coding (253/588 nt) | PP_0197 | hypothetical protein |
| ? | NC_002947 | 248055 = | 43 (0.750) | coding (323/588 nt) | PP_0197 | hypothetical protein | |||||
AGGCTTGTCGAGGGTGTCGACCAGCTCGACCACATCGCCGATGCGAAACGGCCCGACCGTGAAGATCAACACTGCGCACAACAGGTTGGACAGCACGCTCCACATGGCGAAGAAGGCCACCGCCGCTACCGCTACGAAGCCGGAAAGTGCTGTCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/248140‑247985‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgctgtccaACCTGTTGTGCGCAGTGTTGATCTTCACGGTCGGGCCGTTTCGCATCGGCGATGTGGTCGAGCTGGTCGACACCCTCGACAAGCCTGGCGTGAAAGGCCGGGTGATCGCTATCAACCTGCTGTTCACCACCCTGCTGGAAGTGCCCG > NC_002947/248055‑248201 AGGCTTGTCGAGGGTGTCGACCAGCTCGACCACATCGCCGATGCGAAACGGCCCGACCGTGAAGATCAACACTGCGCACAACAGGTTGGACAGCACGCTCCACATGGCGAAGAAGGCCACCGCCGCTACCGCTACGAAGCCGGAAAGTG < 1:382175/149‑1AGGCTTGTCGAGGGTGTCGACCAGCTCGACCACATCGCCGATGCGAAACGGCCCGACCGTGAAGATCAACACTGCGCACAACAGGTTGGACAGCACGCTCCACATGGCGAAGAAGGCCACCGCCGCTACCGCTACGAAGCCGGAAAGTG < 7:332565/149‑1 TTGTCGAGGGTGTCGACCAGCTCGACCACATCGCCGATGCGAAACGGCCCGACCGTGAAGATCAACACTGCGCACAACAGGTTGGACAGCACGCTCCACATGGCGAAGAAGGCCACCGCCGCTACCGCTACGAAGCCGGAAAGTGCTGT > 2:119040/1‑149 TGTCGAGGGTGTCGACCAGCTCGACCACATCGCCGATGCGAAACGGCCCGACCGTGAAGATCAACACTGCGCACAACAGGTTGGACAGCACGCTCCACATGGCGAAGAAGGCCACCGCCGCTACCGCTACGAAGCCGGAAAGTGCTGTC > 6:84221/1‑149 GTCGAGGGTGTCGACCAGCTCGACCACATCGCCGATGCGAAACGGCCCGACCGTGAAGATCAACACTGCGCACAACAGGTTGGACAGCACGCTCCACATGGCGAAGAAGGCCACCGCCGCTACCGCTACGAAGCCGGAAAGTGCTGTC < 2:274249/148‑1 TCGAGGGTGTCGACCAGCTCGACCACATCGCCGATGCGAAACGGCCCGACCGTGAAGATCAACACTGCGCACAACAGGTTGGACAGCACGCTCCACATGGCGAAGAAGGCCACCGCCGCTACCGCTACGAAGCCGGAAAGTGCTGTCCA > 5:112771/1‑149 GACAGCACGCTCCACACGGCGAAGAAGGCCACCGCCGCTACCGCTACGAAGCCGGAAATTGCTGTCCAACCTCTTGTGCGCAGTGTTGATCTTCACGGTCGGGCCGTTTCGCATAGCAGATGTGGTCGAGCTGGTCGACACCCTCGcc > 2:181239/1‑146 CACGCTCCACATGGCGAAGAAGGCCACCGCCGCTACCGCTACGAAGCCGGAAAGTGCTGTCCAACCTGTTGTGCGCAGTGTTGATCTTCACGGTCGGGCCGTTTC > 8:45394/1‑105 CACGCTCCACATGGCGAAGAAGGCCACCGCCGCTACCGCTACGAAGCCGGAAAGTGCTGTCCAACCTGTTGTGCGCAGTGTTGAACTTCACGGTCGGGCCGTTTC < 7:45394/105‑1 TGTCCAACCTGTTGTGCGCAGTGTAGATCTTCACGGTCGGGCCGTTTCGCATCGGCGATGTGGTCGAGCTGGTCGACACCCTCGACAAGCCTGGCGTGAAAGGCCGGGTGATCGCTATCAACCTCCTGTTCACCACCCTGCTGGAAGTG > 8:247284/1‑149 TCCAACCTGTTGTGCGCAGTGTTGATCTTCACGGTCGGGCCGTTTCGCATCGGCGATGTGGTCGAGCTGGTCGACACCCTCGACAAGCCTGGCGTGAAAGGCCGGGTGATCGCTATCAACCTGCTGTTCACCACCCTGCTGGAAGTG < 5:293668/147‑1 CAACCTGTTGTGCGCAGTGTTGATCTTCACGGTCGGGCCGTTTCGCATCGGCGATGTGGTCGAGCTGGTCGACACCCTCGACAAGCCTGGCGTGAAAGGCCGGGTGATCGCTATCAACCTGCTGTTCACCACCCTGCTGGAAGTGCCC > 5:54553/1‑148 CAACCTGTTGTGCGCAGTGTTGATCTTCACGGTCGGGCCGTTTCGCATCGGCGATGTGGTCGAGCTGGTCGACACCCTCGACAAGCCTGGCGTGAAAGGCCGGGTGATCGCTATCAACCTGCTGTTCACCACCCTGCTGGAAGTGCCC > 3:101110/1‑148 CAACCTGTTGTGCGCAGTGTTGATCTTCACGGTCGGGCCGTTTCGCATCGGCGATGTGGTCGAGCTGGTCGACACCCTCGACAAGCCTGGCGTGAAAGGCCGGGTGATCGCTATCAACCTGCTGTTCACCACCCTGCTG > 7:126006/1‑139 CAACCTGTTGTGCGCAGTGTTGATCTTCACGGTCGGGCCGTTTCGCATCGGCGATGTGGTCGAGCTGGTCGACACCCTCGACAAGCCTGGCGTGAAAGGCCGGGTGATCGCTATCAACCTGCTGTTCACCACCCTGCTG < 8:126006/139‑1 AACCTGTTGTGCGCAGTGTTGATCTTCACGGTCGGGCAGTTTCGCATCGGCGATGTGGTCGAGCTGGTCGCCACCCTCGACAAGACTGGCGTGAAAGGCCGGGTGATCGCTAGCAACCTGCGGTGACCCACCCTGCTGGACGTTCCCG > 4:229255/1‑148 AACCTGTTGTGCGCAGTGTTGATCTTCAAGGTCGGGCCGTTTCGAATCTGCGATGTGGTCGAGCTGGTCGACACCCTCGACAAGCCTGGCGTGAAAGGCCGGGTGATCGCTATCAACCTGCTGTTCACCACCCTGCTGGAAGTGCCCG > 2:383573/1‑148 AGGCTTGTCGAGGGTGTCGACCAGCTCGACCACATCGCCGATGCGAAACGGCCCGACCGTGAAGATCAACACTGCGCACAACAGGTTGGACAGCACGCTCCACATGGCGAAGAAGGCCACCGCCGCTACCGCTACGAAGCCGGAAAGTGCTGTCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/248140‑247985‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgctgtccaACCTGTTGTGCGCAGTGTTGATCTTCACGGTCGGGCCGTTTCGCATCGGCGATGTGGTCGAGCTGGTCGACACCCTCGACAAGCCTGGCGTGAAAGGCCGGGTGATCGCTATCAACCTGCTGTTCACCACCCTGCTGGAAGTGCCCG > NC_002947/248055‑248201 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |