New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	296324 =	70 (1.130)	9 (0.150)	6/252	NT	11.4%	coding (103/633 nt)	PP_0242	TetR family transcriptional regulator
	?	NC_002947	296414 =	73 (1.240)					coding (13/633 nt)	PP_0242	TetR family transcriptional regulator

CGACCTGTTCGTCGGCGCCTACCAGGCCAGCATCCTGGCAATCAGCAGTTGATGAACCGCACCACCACCCCGCGCAAACCACGCGCCAGCAGCCAGGCCAGGATCGAGGCGATCCTGGCGGCTGCGCGTGAGCTGTTGGCCGAACAAGGGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/296477‑296324 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggggtggTGGTGCGGTTCATCAACTGCTGATTGCCAGGATGCTGGCCTGGTAGGCGCCGACGAACAGGTCGAAGTCACCGACTTCGTTTTGCTCCAGCTCGGACTGCCTGGCGAGCGACTCGCGGGCCAGCGTCTCGAATGCTTGCTGCTTTTCG  >  NC_002947/296414‑296561                                                                                                                                                                                                                                                                                                                CGACCTGTTCGTCGGCGCCTACCAGGCCAGCATCCTGGCAATCAGCAGTTGATGAACCGCACCACCACCCCGCGCAAACCACGCGCCAGCAGCCAGGCCAGGATCGAGGCGATCCTGGCGGCTGCGCGTGAGCTGTTGGCCGAACAAG                                                                                                                                                            <  6:215336/148‑1 CGACCTGTTCGTCGGCGCCTACCAGGCCAGCATCCAGGCAATCAGCAGTTGATGAACCGCACCACCACCCCGCGCAAACCACGCGCCAGCAGCCAGGCCAGGATCGAGGCGATCCTGGCGGCTGCGCGTGAGCTGTTGGGCGAACAAGG                                                                                                                                                           >  4:166578/1‑149  GACCTGTTCGTCGGCGCCTACCAGGCCAGCATCCTGGCAATCAGCAGTTGATGAACCGCACCACCACCCCGCGCAAACCACGCGCCAGCAGCCAGGCCAGGATCGAGGCGATCCTGGCGGCTGCGCGTGAGCTGTTGGCCGAACAAGGG                                                                                                                                                          >  2:78381/1‑149                                                              CCACCCCCCCGCGCAAACCACGCGCCAGCAGCCAGGCCAGGATCGAGGCGATCCTGGCGGCTGCGCGTGAGCTGTTGGCCGAACAAGGGGTGGTGGTGCGGTTCATCAACTGCTGATTGCCAGGATGCTGGCCTGGTAGGCGCCGACG                                                                                               >  4:141119/1‑148                                                               CACCACCCCGCGCAAACCACGCGCCAGCAGCCAGGCCAGGATCGAGGCGATCCTGGCGGCTGCGCGTGAGCTGTTGGCCGAACAAGGGGTGGTGGTGCGGTTCATCACCTGCTGATTGCCAGGATGCTGGCCTGGTAGGCGCCGACGAA                                                                                             >  8:166219/1‑149                                                                ACCACCCCGCGCAAACCACGCGCCAGCAGCCAGGCCAGGATCGAGGCGATCCTGGCGGCTGCGCGTGAGCTGTTGGCCGAACAAGGGGTGGTGGTGCGGTTCATCAACTGCTGATTGCCAGGATGCTGGCCTGGTAGGCGCCGACGAA                                                                                             >  4:254305/1‑148                                                                               CCACGCGCCAGCAGCCAGGCCAGGATCGAGGCGATCCTGGCGGCTGCGCGTG‑‑‑‑GTTTG‑CG‑‑C‑‑GGGGTGGTGGTGCGGTTCATCAACTGCTGATTGCCAGGATGCTGGCCTGGTAGGCGCCGACGAACAGGTCGAAGTCACCGACTTCGTTT                                                                    >  7:142870/1‑149                                                                                 ACGCGCCAGCAGCCAGGCCAGGATCGAGGCGATCCTGGCGGCTGCGCGTG‑‑‑‑GTTTG‑CG‑‑C‑‑GGGGTGGTGGTGCGGTTCATCAACTGCTGATTGCCAGGATGCTGGCCTGGTAGGCGCCGACGAACAGGTCGAAGTCACCGACTTCGTTTTG                                                                  >  5:299600/1‑149                                                                                  CGCGCCAGCAGCCAGGCCAGGATCGAGGCGATCCTGGCGGCTGCGCGTG‑‑‑‑GTTTG‑CG‑‑C‑‑GGGGTGGTGGTGCGGTTCATCAACTGCTGATTGCCAGGATGCTGGCCTGGTAGGCGCCGACGAACAGGTCGAAGTCACCGACTTCGTTTTGC                                                                 <  8:142870/149‑1                                                                                          CAGCCAGGCCAGGATCGAGGCGATCCTGGCGGCTGCGCGTGAGCTGTTGGCCGAACAAGGGGTGGTGGTGCGGTTCATCAACTGCTGATTGCCAGGATGCTGGCCTGGTAGGCGCCGACGAACAGGTCGAAGTCACCGACTTCGTTT                                                                    <  3:254305/147‑1                                                                                           AGCCAGGCCAGGATCGAGGCGATCCTGGCGGCTGCGCGTGAGCTGTTGGCCGAACAAGGGGTGGTGGTGCGGTTCATCAACTGCTGATTGCCAGGATGCTGGCCTGGTAGGCGCCGACGAACAGGTCGAAGTCACCGACTTCGTTTTGC                                                                 <  3:141119/149‑1                                                                                                             GCGATCCTGGCGGCTGCGCGTGAGCTGTTGGCCGAACAAGGGGTGGTGGTGCGGTTCATCAACTGCTGATTGCCAGGATGCTGGCCTGGTAGGCGCCGACGAACAGGTCGAAGTCACCGACTTCGTTTTGCTCCAGCTCGGACTGCCTG                                               <  7:166219/149‑1                                                                                                                                                          GTGGTGCGGTTCATCAACTGCTGATTGCCAGGATGCTGGCCTGGTAGGCGCCGACGAACAGGTCGAAGTCACCGACTTCGTTTTGCTCCAGCTCGGACTGCCTGGCGAGCGACTCGCGGGCCAGCGTCTCGAATGCTTGCTGCTTTTCG  <  1:252607/149‑1                                                                                                                                                                                                                                                                                                                CGACCTGTTCGTCGGCGCCTACCAGGCCAGCATCCTGGCAATCAGCAGTTGATGAACCGCACCACCACCCCGCGCAAACCACGCGCCAGCAGCCAGGCCAGGATCGAGGCGATCCTGGCGGCTGCGCGTGAGCTGTTGGCCGAACAAGGGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/296477‑296324 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggggtggTGGTGCGGTTCATCAACTGCTGATTGCCAGGATGCTGGCCTGGTAGGCGCCGACGAACAGGTCGAAGTCACCGACTTCGTTTTGCTCCAGCTCGGACTGCCTGGCGAGCGACTCGCGGGCCAGCGTCTCGAATGCTTGCTGCTTTTCG  >  NC_002947/296414‑296561

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.