New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1257367	64 (1.030)	6 (0.100)	4/250	NT	9.4%	intergenic (‑53/‑91)	PP_mr14/dcd	cspA regulatory region/deoxycytidine triphosphate deaminase
	?	NC_002947	= 1257394	55 (0.940)					intergenic (‑80/‑64)	PP_mr14/dcd	cspA regulatory region/deoxycytidine triphosphate deaminase

CGATGGGCCGATCAGGATCGTGCATCAAACTAGAGATTCTCGGTGTCACGTGCAGCACAGTGGCAACACCTTACCCCACTTTCCGCAACCTGCCAATGGTCAGAAGACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1257212‑1257367 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccggcgcCCAGGTTAAAGTTCCATCCCTCATCCCGCGCCGGGTGGGGGCTGCAGCCGCCGCCGATCCGAATTTGCCTAAAGCGTCTTCTGACCATTGGCAGGTTGCGGAAAGTGGGGTAAGGTGTTGCCACTGTGCTGCACGTGACACCGAGAAT  <  NC_002947/1257394‑1257247                                                                                                                                                                                                                                                                                                                  CGATGGGCCGATCAGGATCGTGCATCAAACTAGAGATTCTCGGTGTCACGTGCAGCACAGTGGCAACACCTTACCCCACTTTCCGCAACCTGCCAATGGTCAGAAGACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCAC                                                                                                                                                             >  5:19360/1‑149  GATGGGCCGATCAGGATCGTGCATCAAACTAGAGATTCTCGGTGTCACGTGCAGCACAGTGGCAACACCTTACCCCACTTTCCGCAACCTGCCAATGGTCAGAAGACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACC                                                                                                                                                            <  2:177422/149‑1       gcaGATCAGGATCGTGCATCAAACTAGAGATTCTCGGTGTCACGTGCAGCACAGTGGCAACACCTTACCCCACTTTCCGCAACCTGCCAATGGTCAGAAGACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCG                                                                                                                                                       >  4:136389/4‑149          GATCAGGATCGTGCATCAAACTAGAGATTCTCGGTGTCACGTGCAGCACAGTGGCAACACCTTACCCCACTTTCCGCAACCTGCCAATGGTCAGAAGACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCCC                                                                                                                                                    >  2:241371/1‑149                         TCAAACTAGAGATTCTCGGTGTCACGTGCAGCACAGTGGCAACACCTTACCCCACTTTCCGCAACCTGCCAATGGTCAGAAGACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCCCAGGTTAAAGTTCCAT                                                                                                                                     >  5:63594/1‑149                                          GGTGTCACGTGCAGCACAGTGGCAACACCTTACCCCACTTTCCGCAACCTTCCAATGGTCAGAAGACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCCCAGGTTAAAGTTCCATCCCTCATCCCGCGCCGG                                                                                                                    <  2:310582/149‑1                                          GGTGTCACGTGCAGCACAGTGGCAACACCTTACCCCACTTTCCGCAACCTGCCAATGGTCAGAAGACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCCCAGGTTAAAGTTCCATCCCTCATCCCGCGCCGG                                                                                                                    <  6:263491/149‑1                                          GGTGTCACGTGCAGCACAGTGGCAACACCTTACCCCACTTTCCGCAACCTGCCAATGGTCAGAAGACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCCCAGGTTAAAGTTCCATCCCTCATCCCGCGCCGG                                                                                                                    <  6:63594/149‑1                                           GTGTCACGTGCAGCACAGTGGCAACACCTTACCCCACTTTCCGCAACCTGCCAATGGTCAGAAGACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCCCAGGTTAAAGTTCCATCCCTCATCCCGCGCCGGG                                                                                                                   <  1:241371/149‑1                                            TGTCACGTGCAGCACAGTGGCAACACCTTACCCCACTTTCCGCAACCTGCCAATGGTCAGAAGACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCCCAGGTTAAAGTTCCATCCCTCATCCCGCGCCGGGT                                                                                                                  <  2:224522/149‑1                                                                                                                                                      CCGGCGCCCAGGTTAACGTTCCATCCCTCATCCCGCGCCGGGTGGGGGCTGCAGCCGCCGCCGATCCGAATTTGCCTAAAGCGTCTTCTGACCATTGGCAGGGTGCGGAAAGTGGGGTAAGGTGTTGCCACTGTGCTGCACGTGACACC        <  6:54812/149‑1                                                                                                                                                          CGCCCAGGTTAAAGTTCCATCCCTCATCCCGCGCCGGGTGGGGGCTGCAGCCGCCGCCGATCCGAATTTGCCTAAAGCGTCTTCTGACCATTGGCAGGTTGCGGAAAGTGGGGTAAGGTGTTGCCACTGTGCTGCACGTGACACCGAGA    <  5:81933/149‑1                                                                                                                                                            CCCAGGTTAAAGTTCCATCCCTCATCCCGCGCCGGGTGGGGGCTGCAGCCGCCGCCGATCCGAATTTGCCTAAAGCGTCTTCTGACCATTGGCAGGTTGCGGAAAGTGGGGTAAGGTGTTGCCACTGTGCTGCACGTGACACCGAGAAT  <  2:48282/149‑1                                                                                                                                                            CCCAGGTTAAAGTTCCATCCCTCATCCCGCGCCGGGTGGGGGCTGCAGCCGCCGCCGATCCGAATTTGCCTAAAGCGTCTTCTGACCATTGGCAGGTTGCGGAAAGTGGGGTAAGGTGTTGCCACTGTGCTGCACGTGACACCGAGAAT  >  7:169886/1‑149                                                                                                                                                                                                                                                                                                                  CGATGGGCCGATCAGGATCGTGCATCAAACTAGAGATTCTCGGTGTCACGTGCAGCACAGTGGCAACACCTTACCCCACTTTCCGCAACCTGCCAATGGTCAGAAGACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1257212‑1257367 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccggcgcCCAGGTTAAAGTTCCATCCCTCATCCCGCGCCGGGTGGGGGCTGCAGCCGCCGCCGATCCGAATTTGCCTAAAGCGTCTTCTGACCATTGGCAGGTTGCGGAAAGTGGGGTAAGGTGTTGCCACTGTGCTGCACGTGACACCGAGAAT  <  NC_002947/1257394‑1257247

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.