New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1257367	64 (1.030)	6 (0.100)	4/250	NT	9.4%	intergenic (‑53/‑91)	PP_mr14/dcd	cspA regulatory region/deoxycytidine triphosphate deaminase
	?	NC_002947	= 1257394	55 (0.940)					intergenic (‑80/‑64)	PP_mr14/dcd	cspA regulatory region/deoxycytidine triphosphate deaminase

ATTCTCGGTGTCACGTGCAGCACAGTGGCAACACCTTACCCCACTTTCCGCAACCTGCCAATGGTCAGAA‑GACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACACCCCGCCATGAGCATCAAATCGGACAAGTGGATTCGCCGCATGGCGCAGGAACACGGCATGATCGAGCCGTTCGTCGAGCGCCAGGTGCGC  >  NC_002947/1257247‑1257541                                                                                                                                                      |                                                                                                                                                    aTTCTCGGTGTCACGTGCAGCACAGTGGCAACACCTTACCCCACTTTCCGCAACCTGCCAATGGTCAGAA‑GACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGg                                                                                                                                                    >  7:169886‑M2/1‑148 (MQ=255) aTTCTCGGTGTCACGTGCAGCACAGTGGCAACACCTTACCCCACTTTCCGCAACCTGCCAATGGTCAGAA‑GACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGg                                                                                                                                                    <  2:48282‑M2/149‑2 (MQ=255)   tctcGGTGTCACGTGCAGCACAGTGGCAACACCTTACCCCACTTTCCGCAACCTGCCAATGGTCAGAA‑GACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGgcg                                                                                                                                                  <  5:81933‑M2/149‑4 (MQ=255)       ggTGTCACGTGCAGCACAGTGGCAACACCTTACCCCACTTTCCGCACCCTGCCAATGGTCAGAA‑GACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACGTTAACCTGGgcgccgg                                                                                                                                              <  6:54812‑M2/149‑8 (MQ=255)             aCGTGCAGCACAGTGGCAACACCTTACCCCACTTTCCGCAACCTGCCAATGGTCAGAA‑GACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCgg                                                                                                                                        >  8:350215/1‑149 (MQ=255)             aCGTGCAGCACAGTGGCAACACCTTACCCCACTTTCCGCAACCTGCCAATGGTAAGAA‑GACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GAGGAGGGATGGACCTTTAACCTGGGCGCCGGGACCgg                                                                                                                                        >  8:281030/1‑149 (MQ=255)              cGTGCAGCACAGTGGCAACACCTTACCCCACTTTCCGCAACCTGCCAATGGTCAGAA‑GACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACTGGt                                                                                                                                       <  6:23827/149‑1 (MQ=255)              cGTGCAGCACAGTGGCAACACCTTACCCCACTTTCCGCAACCTGCCAATGGTCAGAA‑GACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGt                                                                                                                                       <  6:19360/149‑1 (MQ=255)                   agcaCAGTGGCAACACCTTACCCCACTTTCCGCAACCTGCCAATGGTCAGAA‑GACGCTTTAGGCAAATTCGGATCGGCGGCGACTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAatat                                                                                                                                  >  6:123913/1‑149 (MQ=255)                   agcaCAGTGCCTACAGCTTACCCGACTTTCCGCAACCTGCCTATGGTCATAA‑GACGCTTTAGGCTATTTCGGATCGGCGGCGGCTGCAGCCCCCACCGGGCGGGG‑GATGTGGTATGGAACTTTAACCTGGGGGCCGGGAGCGGTAata                                                                                                                                   <  2:44665/148‑1 (MQ=255)                        aGTGGCAACACCTTACCCCACTTTCCGCAACCTGCCAATGGTCAGAA‑GACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGcgcg                                                                                                                             >  6:248150/1‑149 (MQ=255)                            gCAACACCTTACCCCACTTTCCGCAACCTGCCAATGGTCAGAA‑GACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCA‑CCGGCGCGG‑GATGAGGGATGGAACTTTAACGTGGGCGCCGGGACCGGTAATATGCGCGTCACg                                                                                                                        >  7:168777/1‑149 (MQ=255)                             cAACACCTTACCCCACTTTCCGCAACCTGCCAATGGTCAGAA‑GACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTCACCTGGGCGCCGGGACCGGTAATATGCGCGTCAc                                                                                                                         >  6:339031/1‑148 (MQ=255)                              aaCACCTTACCCCACTTTCCTCAACCTGCCAATGGTCAGAA‑GACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGa                                                                                                                       <  2:223221/149‑1 (MQ=255)                              aaCACCTTACCCCACTTTCCGCAACCTGCCAATGGTCAGAA‑GACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGa                                                                                                                       >  6:333236/1‑149 (MQ=255)                                 acCTTACCCCACTTTCCGCAACCTGCCAATGGTCAGAA‑GACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGAtt                                                                                                                     >  8:94205/1‑148 (MQ=255)                                 acCTTACCCCACTTTCCGCAACCTGCCAATGGTCAGAA‑GACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGAtt                                                                                                                     <  7:94205/148‑1 (MQ=255)                                       ccccACTTTCCCCAACCATCCAAAGGTCCTAACCAGGCTTT‑CGCAAATTCCGCACGGGGGGGGGTGGATCCCCCAACCGGGGCGGATATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCAc                                                                                                                <  1:111126/148‑1 (MQ=255)                                         ccACTTTCCGCAACCTGCCAATGGTCAGAA‑GACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCg                                                                                                            >  6:152021/1‑149 (MQ=255)                                            cTTTCCGCAACCTGCCAATGGTCAGAA‑GACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCaa                                                                                                         <  6:81933/149‑1 (MQ=255)                                             tttCCGCAACCTGCCAATGGTCAGAAGGACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCaa                                                                                                         >  1:5089/1‑149 (MQ=255)                                                ccGCAACCTGCCAATGGTCAGAA‑GACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCaa                                                                                                         >  3:106978/1‑145 (MQ=255)                                                ccGCAACCTGCCAATGGTCAGAA‑GACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCaa                                                                                                         <  4:106978/145‑1 (MQ=255)                                                  gCAACCTGCCAATGGTCAGAA‑GACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAata                                                                                                                                   <  1:245090/117‑1 (MQ=255)                                                  gCAACCTGCCAATGGTCAGAA‑GACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAata                                                                                                                                   >  2:245090/1‑117 (MQ=255)                                                  gCAACCTGCCAATGGTCAGAA‑GACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTc                                                                                                   <  5:152021/149‑1 (MQ=255)                                                   cAACCTGCCAATGGTCAGAA‑GACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCa                                                                                                  <  1:48282/149‑1 (MQ=255)                                                   cAACCTGCCAATGGTCAGAA‑GACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCa                                                                                                  <  3:136389/149‑1 (MQ=255)                                                   cAACCTGCCAATGGTCAGAA‑GACGCTGTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GAGGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGAGTTTCACCTCGCAACTCtt                                                                                                    >  4:6340/1‑147 (MQ=255)                                                           ctaTGGTCAGAA‑GACGCTGTAGGTAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGACTGGAACTTTAACCTGTGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACAccc                                                                                          <  7:135079/147‑1 (MQ=255)                                                           cAATGGTCAGAA‑GACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACAccc                                                                                          >  6:224852/1‑149 (MQ=255)                                                           cAATGGTCAGAA‑GACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACAccc                                                                                          >  2:17501/1‑149 (MQ=255)                                                                gTCTGAA‑GCCGCTTTAGGCAAATGCGGCTCGGCGGCCGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGCTGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACACCCCGcc                                                                                      <  8:142077/148‑1 (MQ=255)                                                                   agaa‑gaCGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGATCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACACCCCGCCATGa                                                                                  <  1:300079/149‑1 (MQ=255)                                                                   agaa‑gaCGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACACCCCGCCATGa                                                                                  <  6:332462/149‑1 (MQ=255)                                                                    gaa‑gaCGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGAt                                                                                                                      <  7:253417/112‑1 (MQ=255)                                                                    gaa‑gaCGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGAt                                                                                                                      >  8:253417/1‑112 (MQ=255)                                                                        gaCGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACACCCCGCCATGAGCAt                                                                              >  6:5049/1‑149 (MQ=255)                                                                           gCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACACCCCGCCATGAGCATCa                                                                            >  6:91379/1‑148 (MQ=255)                                                                             tttAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACACCCCGCCAGGAGCCTCaaag                                                                         >  8:253614/1‑148 (MQ=255)                                                                               tAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACACCCCGCCATGAGCATCAAATc                                                                        <  4:180197/148‑1 (MQ=255)                                                                                  gCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACACCCCGCCATGAGCATc                                                                             <  1:230051/140‑1 (MQ=255)                                                                                  gCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACACCCCGCCATGAGCATc                                                                             >  2:230051/1‑140 (MQ=255)                                                                                               ggcggcggcTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACACCCCGCCATGAGCATCAAATCGGACAAGTGGATTcgcc                                                       <  5:224852/149‑1 (MQ=255)                                                                                                gcggcggcTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACACCCCGCCATGAGCATCAAATCGGACAAGt                                                                >  2:347100/1‑139 (MQ=255)                                                                                                   gcggcTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACACCCCGCCATGAGCATCAAATCGGACAAGTGGATTcgccgc                                                     <  3:213271/147‑1 (MQ=255)                                                                                                   gcggcTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACACCCCGCCATGAGCATCAAATCGGACAAGTGGATTcgccgc                                                     >  4:213271/1‑147 (MQ=255)                                                                                                     ggcTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACACCCCGCCATGAGCATCAAATCGGACAAGTGGATTCGCCGCATgg                                                 <  5:248150/149‑1 (MQ=255)                                                                                                        tGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACACCCCGCCATGAGCATCAAATCGGACAAGTGGATTCGCCGCATGgcg                                               >  3:223482/1‑148 (MQ=255)                                                                                                        tGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACACCCCGCCATGAGCATCAAATCGGACAAGTGGATTCGCCGCATGgcg                                               >  7:128541/1‑148 (MQ=255)                                                                                                         gCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAAGTCTTCAGGACACCCCGCCATGAGCATCAAATCGGACAAGTGGATTCGCCGCATGgcg                                               >  3:57806/1‑147 (MQ=255)                                                                                                          catgccccA‑CCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACACCCCGCCATGAGCATCAAATCGGACAAGTGGATTCGCCGCATGGCGCAgg                                           <  8:168777/145‑1 (MQ=255)                                                                                                              ccccACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACACCCCGCCATGAGCATCAAATCGGACAAGTGGATTCGCCGCATGGCGCAGGaa                                         >  6:86761/1‑148 (MQ=255)                                                                                                                  aCCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGgcgccgggtgggggctgcagccgccgccgatccgaatttgcctaaagcgtcttctgaccattggcaggttgcggaaagtggggtaaggtgttgccactgtgctgcacgtgaca                                    <  2:224522‑M2/149‑114 (MQ=255)                                                                                                                  aCCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACACCCCGCCATGAGCATCAAATCGGACAAGTGGATTCGCCGCATGGCGCAGGAACACgg                                    >  3:245904/1‑149 (MQ=255)                                                                                                                  aCCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACACCCCGCCATGAGCATCAAATCGGACAAGTGGATTCGCCGCATGGCGCAGGAACACgg                                    >  3:250722/1‑149 (MQ=255)                                                                                                                   cccGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGgcgccgggtgggggctgcagccgccgccgatccgaatttgcctaaagcgtcttctgaccattggcaggttgcggaaagtggggtaaggtgttgccactgtgctgcacgtgacac                                   <  1:241371‑M2/149‑115 (MQ=255)                                                                                                                    ccGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGgcgccgggtgggggctgcagccgccgccgatccgaatttgcctaaagcgtcttctgaccattggcaggttgcggaaagtggggtaaggtgttgccactgtgctgcacgtgacacc                                  <  6:263491‑M2/149‑116 (MQ=255)                                                                                                                    ccGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGgcgccgggtgggggctgcagccgccgccgatccgaatttgcctaaagcgtcttctgaccattggcaggttgcggaaagtggggtaaggtgttgccactgtgctgcacgtgacacc                                  <  6:63594‑M2/149‑116 (MQ=255)                                                                                                                    ccGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGgcgccgggtgggggctgcagccgccgccgatccgaatttgcctaaagcgtcttctgaccattggaaggttgcggaaagtggggtaaggtgttgccactgtgctgcacgtgacacc                                  <  2:310582‑M2/149‑116 (MQ=255)                                                                                                                    ccGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACACCCCGCCATGAGCATCAAATCGGACAAGTGGATTCGCCGCATGGCGCAGGAACACGGCa                                  >  1:214722/1‑149 (MQ=255)                                                                                                                                     gATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACACCCCGCCATGAGCATCAAATCGGACAAGTGGATTCGCCGCATGGCGCAGGAACACGGCATGATCGAGCCGTtcgt                  <  5:54812/149‑1 (MQ=255)                                                                                                                                      aTGGAACTTTAACCTGGgcgccgggtgggggctgcagccgccgccgatccgaatttgcctaaagcgtcttctgaccattggcaggttgcggaaagtggggtaaggtgttgccactgtgctgcacgtgacaccgagaatctctagtttga                 >  5:63594‑M2/1‑17 (MQ=255)                                                                                                                                       tGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACACCCCGCCATGAGCATCAAATCGGACAAGTGGATTCGCCGCATGGCGCAGGAACACGGCATGATCGAGCCGTtcgtcg                <  2:5089/149‑1 (MQ=255)                                                                                                                                             tttAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACACCCCGCCATGAGCATCAAATCGGACAAGTGGATTCGCCGCATGGCGCAGGAACACGGCATGATCGAGCCGTTCGTCGAgcgc           >  5:75648/1‑148 (MQ=255)                                                                                                                                             tttAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACACCCCGCCATGAGCATCAAATCGGACAAGTGGATTCGCCGCATGGCGCAGGAACACGGCATGATCGAGCCGTTCGTCGAgcgc           >  4:103682/1‑148 (MQ=255)                                                                                                                                               tAACCTGGGCGCCGGGACCGGTAATATGCGCGGCACGATTTTCACCTCGCAACTCTTCAGGACACCCCGCCATGAGCATCAAATCGGACAAGTGGATTCGCCGCATGGCGCAGGAACACGGCATGATCGAGCCGTTCGTCGAGCGcc          <  5:26931/147‑1 (MQ=255)                                                                                                                                                   cTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACACCCCGCCATGAGCATCAAATCGGACAAGTGGATTCGCCGCATGGCGCAGGAACACGGCATGATCGAGCCGTTCGTCGAGCGCCAGGTgc    >  1:89939/1‑149 (MQ=255)                                                                                                                                                    tGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACACCCCGCCATGAGCATCAAATCGGACAAg                                                                 <  7:4461/87‑1 (MQ=255)                                                                                                                                                    tGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACACCCCGCCATGAGCATCAAATCGGACAAg                                                                 >  8:4461/1‑87 (MQ=255)                                                                                                                                                     gggcgccgggtgggggctgcagccgccgccgatccgaatttgcctaaagcgtcttctgaccattggcaggttgcggaaagtggggtaaggtgttgccactgtgctgcacgtgacaccgagaatctctagtttgatgcacgatcctgatc  >  2:241371‑M2/1‑2 (MQ=255)                                                                                                                                                      ggCGCCGCGACCGGTTATATCCGCGGCACGTTTTTCACCTCGCAACTCTTCAGGACTCCCCGCCATGAGCATCAAATCGGACATGTGGATTCGCCGCATGGCGCAGGAACACGGCATGATCGAGCCGTTCGTCGAGCGCCAGGTgcgc  <  7:281030/148‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                    ATTCTCGGTGTCACGTGCAGCACAGTGGCAACACCTTACCCCACTTTCCGCAACCTGCCAATGGTCAGAA‑GACGCTTTAGGCAAATTCGGATCGGCGGCGGCTGCAGCCCCCACCCGGCGCGG‑GATGAGGGATGGAACTTTAACCTGGGCGCCGGGACCGGTAATATGCGCGTCACGATTTTCACCTCGCAACTCTTCAGGACACCCCGCCATGAGCATCAAATCGGACAAGTGGATTCGCCGCATGGCGCAGGAACACGGCATGATCGAGCCGTTCGTCGAGCGCCAGGTGCGC  >  NC_002947/1257247‑1257541

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.