New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1387788 =	66 (1.060)	5 (0.080)	5/254	NT	7.8%	intergenic (+14/+108)	PP_1208/PP_1209	SlyX family protein/cold‑shock protein
	?	NC_002947	1387876 =	55 (0.930)					intergenic (+102/+20)	PP_1208/PP_1209	SlyX family protein/cold‑shock protein

AAGGGCCTGCAGGCCGAAGACGTGGTTGCAGTAAACCGCCGTTGACCAACGGCTGACCGGCCGACGCTATCAACGGCAAACCAGCGCCCACAAGGGCCGTGCTGCACCTGAAGGCAGCATCATACCTGTGGGGGCTGGCTTGCCGGCGATAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1387940‑1387788 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatagcGTCGGCCGGTCAGCCGTTGGTCAACGGCGGTTTACTGCAACCACGTCTTCGGCCTGCAGGCCCTTGTCGCGGTGCATCACCGAAAACTCCACGCGCTGGCCTTCGACCAGAATGCGGTGGCCCTCACCGCGGATGGCCCGAAAGTGCA  >  NC_002947/1387876‑1388023                                                                                                                                                                                                                                                                                                               AAGGGCCTGCAGGCCGAAGACGTGGTTGCAGTAAACCGCCGTTGACCAACGGCTGACCGGCCGACGCTATCAACGGCAAACCAGCGCCCACAAGGGCCGTGCTGCACCTGAAGGCAGCATCATACCTGTGGGGGCTGGCTTGCCGGCGA                                                                                                                                                          <  8:70302/149‑1                                                                   CTATCAACGGCAAACCAGCGCCCACAAGGGCCGTGCTGCACCTGAAGGCAGCATCATACCTGTGGGGGCTGGCTTGCCGGCGATAGCGTCGGCCGGTCAGCCGTTGGTCAACGGCGGTTTACTGCAACCACGTCTTCGGCCTGCAGGCC                                                                                        >  6:18309/1‑149                                                                                    GCGCCCACAAGGGCCGTGCTGCACCTGAAGGCAGCATCATACCTGTGGGGGCTGGCTTGCCGGCGATAGCGTCGGCCGGTCAGCCGTTGGTCAACGGCGGTTTACTGCAACCACGTCTTCGGCCTGCAGGCCCTTGTCGCGGTGCATCA                                                                       >  8:60750/1‑149                                                                                     CGCCCACAAGGGCCGTGCTGCACCTGAAGGCAGCATCATACCTGTGGGGGCTGGCTTGCCGGCGATAGCGTCGGCCGGTCAGCCGTTGGTCAACGGCGGTTTACTGCAACCACGTCTTCGGCCTGCAGGCCCTTGTCGCGGTGCATCAC                                                                      <  7:60750/149‑1                                                                                              GGGCCGTGCTGCACCTGAAGGCAGCATCATACCTGTGGGGGCTGGCTTGCCGGCGATAGCGTCGGCCGGTCAGCCGTTGGTCAACGGCGGTTTACTGCAACCACGTCTTCGGCCTGCAGGCCCTTGTCGCGGTGCATCACCGAAAACTC                                                             >  1:70462/1‑149                                                                                                                                 TGGGGGCTGGCTTGCCGGCGATAGCGTCGGCCGGTCAGCCGTTGGTCAACGGCGGTTTACTGCAACCACGTCTTCGGCCTGCAGGCCCTTGTCGCGGTGCATCACCGAAAACTCCACGCGCTGGCCTTCGACCAGAATGCGGTGGCC                            <  5:18309/147‑1                                                                                                                                                    GATAGCGTCGGCCGGTCAGCCGTTGGTCAACGGCGGTTTACTGCAACCACGTCTTCGGCCTGCAGGCCCTTGTCGCGGTGCATCACCGAAAACTCCACGCGCTGGCCTTCGACCAGAATGCGGTGGCCCTCACCGCGGATGGCCCGAAA       <  2:70462/149‑1                                                                                                                                                    GATAGCGTCGGCCGGTCAGCCGTTGGTCAACGGCGGTTTACTGCAACCACGTCTTCGGCCTGCAGGCCCTTGTCGCGGTGCATCACCGAAAACTCCACGCGCTGGCCTTCGACCAGAATGCGGTGGCCCTCACCGCGGATGGCCCGA         >  6:253584/1‑147                                                                                                                                                     ATAGCGTCGGCCGGTCAGCCGTTGGTCAACGGCGGTTTACTGCAACCACGTCTTCGGCCTGCAGGCCCTTGTCGCGGTGCATCACCGAAAACTCCACGCGCTGGCCTTCGACCAGAATGCGGTGGCCCTCACCGCGGATGGCCCGAAA       <  5:239532/148‑1                                                                                                                                                     ATAGCGTCGGCCGGTCAGCCGTTGGTCAACGGCGGTTTACTGCAACCACGTCTTCGGCCTGCAGGCCCTTGTCGCGGTGCATCACCGAAAACTCCACGCGCTGGCCTTCGACCAGAATGCGGTGGCCCGCACCGCGGATGGCCCGAAAG      >  6:234878/1‑149                                                                                                                                                      TAGCGTCGGCCGGTCAGCCGTTGGTCAACGGCGGTTTACTGCAACCACGTCTTCGGCCTGCAGGCCCTTGTCGCGGTGCATCACCGAAAACTCCACGCGCTGGCCTTCGACCAGAATGCGGTGGCCCTCACCGCGGATGGCCCGAAAGT     <  2:69839/149‑1                                                                                                                                                         CGTCGGCCGGTCAGCCGTTGGTCAACGGCGGTTTACTGCAACCACGTCTTCGGCCTGCAGGCCCTTGTCGCGGTGCATCACCGAAAACTCCACGCGCTGGCCTTCGACCAGAATGCGGTGGCCCTCACCGCGGATGGCCCGAAAGTGCA  <  1:234767/149‑1                                                                                                                                                                                                                                                                                                               AAGGGCCTGCAGGCCGAAGACGTGGTTGCAGTAAACCGCCGTTGACCAACGGCTGACCGGCCGACGCTATCAACGGCAAACCAGCGCCCACAAGGGCCGTGCTGCACCTGAAGGCAGCATCATACCTGTGGGGGCTGGCTTGCCGGCGATAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1387940‑1387788 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatagcGTCGGCCGGTCAGCCGTTGGTCAACGGCGGTTTACTGCAACCACGTCTTCGGCCTGCAGGCCCTTGTCGCGGTGCATCACCGAAAACTCCACGCGCTGGCCTTCGACCAGAATGCGGTGGCCCTCACCGCGGATGGCCCGAAAGTGCA  >  NC_002947/1387876‑1388023

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.