New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1424141 =	72 (1.160)	4 (0.070)	4/256	NT	5.9%	coding (852/1209 nt)	PP_5467	hypothetical protein
	?	NC_002947	1424173 =	58 (0.970)					coding (884/1209 nt)	PP_5467	hypothetical protein

CTTTGCCTTGGGGACTTGCTGCTGGTATTCGCTGAAAGCCTCTTTCAGCGATTTGAAGCCGCTGTAGCTCACCGAGTAGTTCTCGACCTTGGCCTTGCGGGCAAAGCCGCTCACCGCTTCAGCCAACACCGCCTGGCCGGTGTACGGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1424291‑1424141 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCT  >  NC_002947/1424173‑1424320                                                                                                                                                                                                                                                                                                             CTTTGCCTTGGGGACTTGCTGCTGGTATTCGCTGAAAGCCTCTTTCAGCGATTTGAAGCCGCTGTAGCTCACCGAGTAGTTCTCGACCTTGGCCTTGCGGGCAAAGCCGCTCACCGCTTCAGCCAACACCGCCTGGCCGGTGTACGGGC                                                                                                                                                        >  6:114584/1‑149  ttaGCCGTGGGGACTTGCTGCTGGTCTTCGCTGATAGCCTCTTTTATCGATTTGAAGGCGCTGTAGCTCAGCGAGTAGTTCTCGACCTTGGCCTTGCGTGAAAAGCCGCTCACCGCTTCAGCCAACACCGCCTGGCCGGTGTACGGGCT                                                                                                                                                       <  4:273109/146‑1    TGCCTTGGGGACTTGCTGCTGGTATTCGCTGAAAGCCTCTTTCAGCGATTTGAAGCCGCTGTAGCTCACCGAGTAGTTCTCGACCTTGGCCTCGCGGGCAAAGCCGCTCACCGCTTCAGCCAACACCGCCTGGCCGGTGTACGGGCT                                                                                                                                                       <  1:141577/147‑1                                                          GCCGCTGTAGCTCACCGAGTAGTTCTCGACCTTGGCCTTGCGGGCAAAGCCGCTCACCGCTTCAGCCAACACCGCCTGGCCGGTGTACGGGC                                                                                                                                                        >  5:52101/1‑92                                                          GCCGCTGTAGCTCACCGAGTAGTTCTCGACCTTGGCCTTGCGGGCAAAGCCGCTCACCGCTTCAGCCAACACCGCCTGGCCGGTGTACGGGC                                                                                                                                                        <  6:52101/92‑1                                                                                                                   CGCTTCAGCCAACACCGCCTGGCCGGTGTACGGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAA                                      <  1:147263/149‑1                                                                                                                   CGCTTCAGCCAACACCGCCTGGCCGGTGTACGGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCC                                        >  2:147263/1‑147                                                                                                                     CTTCAGCCAACACCGCCTGGCCGGTGTACGGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGG                                    >  4:348417/1‑149                                                                                                                           CCAACACCGCCTGGCCGGTGT‑‑TGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGC                                                             <  6:117942/116‑1                                                                                                                                                   GGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTT       <  7:55209/148‑1                                                                                                                                                      TGAAGCGGTGAGCGGCTTTGCCCGCAAGGCGAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGC   >  1:259420/1‑149                                                                                                                                                      TGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGC   >  2:200133/1‑149                                                                                                                                                       GAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCT  >  1:51510/1‑149                                                                                                                                                                                                                                                                                                             CTTTGCCTTGGGGACTTGCTGCTGGTATTCGCTGAAAGCCTCTTTCAGCGATTTGAAGCCGCTGTAGCTCACCGAGTAGTTCTCGACCTTGGCCTTGCGGGCAAAGCCGCTCACCGCTTCAGCCAACACCGCCTGGCCGGTGTACGGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1424291‑1424141 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCT  >  NC_002947/1424173‑1424320

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.