New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1424141 =72 (1.160)4 (0.070) 4/256 NT 5.9% coding (852/1209 nt) PP_5467 hypothetical protein
?NC_002947 1424173 = 58 (0.970)coding (884/1209 nt) PP_5467 hypothetical protein

ACGGCTCCAAGGTGGGGGAAATCGTGCGCAAGGCCGACTTCCAGTCGCTGCCGGAACTGGACGATGTCGAAACCCAGCTCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCT  >  NC_002947/1424026‑1424320
                                                                                                                                                    |                                                                                                                                                   
acgGCTCCAAGGTGGGGGAAATCGTGCGCAAGGCCGACTTCCAGTCGCTGCCGGAACTGGACGATGTCGAAACCCAGCTCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGaa                                                                                                                                                    <  4:176640/149‑1 (MQ=255)
acgGCTCCAAGGTGGGGGAAATCGTGCGCAAGGCCGACTTCCAGTCGCTGCCGGAACTGGACGATGTCGAAACCCAGCTCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGaa                                                                                                                                                    <  4:170712/149‑1 (MQ=255)
acgGCGCCACGGTGGGGGAAATCGGGCGCCAGGCCGACTTCCAGGCGCTGCCGGAACTGGACGATGGCGCACCCCAGCGCAAGCGTGCCCGGAGCGCGCTGCTGATTGGCGCGGACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGaa                                                                                                                                                    <  4:170713/149‑1 (MQ=255)
  ggCTCCAAGGTGGGGGAAATCGTGCGCAAGGCCGACTTCCAGTCGCTGCCGGAACTGGACGATGTCGAAACCCAGCTCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGc                                                                                                                                                  >  8:55209/1‑149 (MQ=255)
  ccttggggacttgctgctggtattcgctgaaagcctctttcagcgatttgaagccgctgtagctcaccgagtagttctcgaccttggccttgcgggcaaagccgctcaccgcttCAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAg                                                                                                                                                   >  4:348417‑M1/115‑149 (MQ=255)
   gCTCCAAGGTGGGGGAAATCTTGCGCAAGGCCGACTTCCAGTCGCTGCCGGAACTGGACGATGTCGAAACCCAGCTCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCg                                                                                                                                                 <  5:369373/149‑1 (MQ=255)
    ttggggacttgctgctggtattcgctgaaagcctctttcagcgatttgaagccgctgtagctcaccgagtagttctcgaccttggccttgcgggcaaagccgctcaccgcttCAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCg                                                                                                                                                 <  1:147263‑M1/37‑1 (MQ=255)
      ggggacttgctgctggtattcgctgaaagcctctttcagcgatttgaagccgctgtagctcaccgagtagttctcgaccttggccttgcgggcaaagccgctcaccgcttCAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCg                                                                                                                                                 >  2:147263‑M1/111‑147 (MQ=255)
               gggAAATCGTGCGCAAGGCCGACTTCCAGTCGCTGCCGGAACTGGACGATGTCGAAACCCAGCTCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCttt                                                                                                                                     <  5:32509/149‑1 (MQ=255)
                 gAAATCGTGCGCAAGGCCGACTTCCAGTCGCTGCCGGAACTGGACGATGTCGAAACCCAGCTCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGc                                                                                                                                   <  7:313508/149‑1 (MQ=255)
                             aaGGCCGACTTCCAGTCGCTGCCGGAACTGGACGATGTCGAAACCCAGCTCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGccc                                                                                                                                 >  3:39739/1‑139 (MQ=255)
                             aaGGCCGACTTCCAGTCGCTGCCGGAACTGGACGATGTCGAAACCCAGCTCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGccc                                                                                                                                 <  4:39739/139‑1 (MQ=255)
                                    actggaaGTCGCTGCCGGAACTGGACGATGTCGAAACCCAGCTCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAg                                                                                                                            >  1:376666/7‑137 (MQ=255)
                                    actggaaGTCGCTGCCGGAACTGGACGATGTCGAAACCCAGCTCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAg                                                                                                                            <  2:376666/131‑1 (MQ=255)
                                              gCTGCCGGAACTGGACGATGTCGAAACCCAGCTCAAGAGTGCCCTGAGCGCGAGAGCTGATTGGCGCGTACAGCCCGTACACCGGCAAGGCGGTGTTGGCGCAAGCGGTGAGCGCCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCg                                                                                                       >  1:295570/1‑149 (MQ=255)
                                               cTGCCGGAACTGGACGATGTCGAAACCCAGCTCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGt                                                                                                     <  3:130080/149‑1 (MQ=255)
                                                tGCCGGAACTGGACGATGTCGAAACCCAGCTCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCGAGGCCAAGGTCGAGAACTACTCGGt                                                                                                     >  6:93516/1‑148 (MQ=255)
                                                tGCCGGAACTGGACGATGTCGAAACCCAGCTCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGt                                                                                                     >  3:12993/1‑148 (MQ=255)
                                                 gCCGGAACTGGACGATGTCGAAACCCAGCTCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGt                                                                                                     >  5:114584/1‑147 (MQ=255)
                                                  ccGGAACTGGACGATGTCGAAACCCAGCTCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCga                                                                                                                 <  2:17502/134‑1 (MQ=255)
                                                  ccGGAACTGGACGATGTCGAAACCCAGCTCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCga                                                                                                                 >  1:17502/1‑134 (MQ=255)
                                                  ccGGAACTGGACGATGTCGAAACCCAGCTCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGa                                                                                                   <  4:12466/148‑1 (MQ=255)
                                                   cGGAACTGGACGATGTCGAAACCCAGCTCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAg                                                                                                  >  3:269480/1‑148 (MQ=255)
                                                             cGATGTCGAAACCCAGCTCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGGCGAGAACTACTCGGTGAGCTACAGCGGc                                                                                        >  8:241141/1‑148 (MQ=255)
                                                                      aaCCCATCTCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGc                                                                              <  2:288249/149‑1 (MQ=255)
                                                                      aaCCCAGCTCAAGAGTGCCCTGAGCGCTATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGc                                                                              <  4:269480/149‑1 (MQ=255)
                                                                      aaCCCAGCTCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGc                                                                              <  1:267293/149‑1 (MQ=255)
                                                                       aCCCAGCTCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCt                                                                             <  1:301783/149‑1 (MQ=255)
                                                                          cAGCTCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGa                                                                           >  4:369676/1‑148 (MQ=255)
                                                                          cAGCTCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGa                                                                           >  5:229671/1‑148 (MQ=255)
                                                                            gCTCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGa                                                                           >  2:380445/1‑146 (MQ=255)
                                                                             cTCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGaaa                                                                         >  3:191340/1‑147 (MQ=255)
                                                                               cAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTa                                                                                               >  2:302961/1‑123 (MQ=255)
                                                                               cAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTa                                                                                               <  1:302961/123‑1 (MQ=255)
                                                                               cAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAgg                                                                     >  5:155008/1‑149 (MQ=255)
                                                                               cAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAgg                                                                     >  8:58351/1‑149 (MQ=255)
                                                                                   agTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCGAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCttt                                                                 <  5:93516/149‑1 (MQ=255)
                                                                                      gCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAg                                                              >  1:383982/1‑149 (MQ=255)
                                                                                       cccTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAg                                                              <  3:369676/148‑1 (MQ=255)
                                                                                       cccTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAg                                                              <  1:325837/148‑1 (MQ=255)
                                                                                       cccTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGc                                                             <  6:229671/149‑1 (MQ=255)
                                                                                        ccTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCtt                                                                                      <  3:204284/123‑1 (MQ=255)
                                                                                        ccTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCtt                                                                                      >  4:204284/1‑123 (MQ=255)
                                                                                         cTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCg                                                            >  7:125398/1‑148 (MQ=255)
                                                                                          tGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGCCTCTTTCAGCGa                                                           >  6:300445/1‑148 (MQ=255)
                                                                                            aGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGCCTCTTTCAGCGa                                                           <  5:300445/146‑1 (MQ=255)
                                                                                            aGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGaa                                                          <  4:12993/147‑1 (MQ=255)
                                                                                            aGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATa                                                        <  1:288267/149‑1 (MQ=255)
                                                                                              cgcgATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATAc                                                       >  1:229449/1‑148 (MQ=255)
                                                                                                 gATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACcagc                                                   <  2:179052/149‑1 (MQ=255)
                                                                                                  aTGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACcagca                                                  <  8:125398/149‑1 (MQ=255)
                                                                                                  aTGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACcagca                                                  >  5:303141/1‑149 (MQ=255)
                                                                                                      cTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGCCTTTCAGCGAATACaagcaga                                                >  4:330197/1‑147 (MQ=255)
                                                                                                         aTTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACcag                                                    <  5:318854/141‑1 (MQ=255)
                                                                                                         aTTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACcag                                                    >  6:318854/1‑141 (MQ=255)
                                                                                                             gcgcGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTccc                                         >  2:207854/1‑148 (MQ=255)
                                                                                                              cgcgTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCgg                                                                                         >  6:322966/1‑99 (MQ=255)
                                                                                                              cgcgTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCgg                                                                                         <  5:322966/99‑1 (MQ=255)
                                                                                                               gcgTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCttt                                                                 >  2:140106/1‑122 (MQ=255)
                                                                                                               cgcttcagccaacaccgcctggccggtgtacgggctgAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTcccc                                        >  2:147263‑M2/38‑147 (MQ=255)
                                                                                                               cgcttcagccaacaccgcctggccggtgtacgggctgAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCaa                                      <  1:147263‑M2/112‑1 (MQ=255)
                                                                                                                 cttcagccaacaccgcctggccggtgtacgggctgAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAgg                                    >  4:348417‑M2/36‑149 (MQ=255)
                                                                                                                   aCAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTc                                                                                     <  1:273209/98‑1 (MQ=255)
                                                                                                                   aCAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTc                                                                                     >  2:273209/1‑98 (MQ=255)
                                                                                                                     AGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTTCACGCAAGGCCAAGGTCGAGAACTACTCGCTGAGCTACAGCGCCTTCAAATCGATAAAAGAGGCTATCAGCGAAGACCAGCAGCAAGTCCCCAcggctaa                                <  4:273109‑M1/149‑4 (MQ=255)
                                                                                                                     AGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCGAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCa                                  <  1:141577‑M1/147‑1 (MQ=255)
                                                                                                                      GCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGc                                                                                        >  5:52101‑M1/1‑92 (MQ=255)
                                                                                                                      GCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGc                                                                                        <  6:52101‑M1/92‑1 (MQ=255)
                                                                                                                      GCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAg                               >  6:114584‑M1/1‑149 (MQ=255)
                                                                                                                         ccaacaccgcctggccggtgttggctgAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGc                                                             <  6:117942‑M2/89‑1 (MQ=255)
                                                                                                                         cGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTc                            >  5:315884/1‑149 (MQ=255)
                                                                                                                              acCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGc                       >  3:162662/1‑149 (MQ=255)
                                                                                                                              acCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGc                       >  2:136747/1‑149 (MQ=255)
                                                                                                                                   ccAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCt                  <  1:380445/149‑1 (MQ=255)
                                                                                                                                     aGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCTACGGCAAAGTTCGCAGCCTTCTGc                <  7:58351/149‑1 (MQ=255)
                                                                                                                                          gtgtTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCag             >  6:121727/1‑147 (MQ=255)
                                                                                                                                              tGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCt                                                                             <  7:115771/79‑1 (MQ=255)
                                                                                                                                              tGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCt                                                                             >  8:115771/1‑79 (MQ=255)
                                                                                                                                               ggctgAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGtt       <  7:55209‑M2/143‑1 (MQ=255)
                                                                                                                                                  tgAAGCGGTGAGCGGCTTTGCCCGCAAGGCGAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGc   >  1:259420‑M2/3‑149 (MQ=255)
                                                                                                                                                  tgAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGc   >  2:200133‑M2/3‑149 (MQ=255)
                                                                                                                                                   gAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCt  >  1:51510‑M2/2‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
ACGGCTCCAAGGTGGGGGAAATCGTGCGCAAGGCCGACTTCCAGTCGCTGCCGGAACTGGACGATGTCGAAACCCAGCTCAAGAGTGCCCTGAGCGCGATGCTGATTGGCGCGTACAGCCCGTACACCGGCCAGGCGGTGTTGGCTGAAGCGGTGAGCGGCTTTGCCCGCAAGGCCAAGGTCGAGAACTACTCGGTGAGCTACAGCGGCTTCAAATCGCTGAAAGAGGCTTTCAGCGAATACCAGCAGCAAGTCCCCAAGGCAAAGTTCGCAGCCTTCTGCCAGGAGGTTGGGCT  >  NC_002947/1424026‑1424320

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.