New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1506411	63 (1.020)	4 (0.070)	4/256	NT	5.6%	coding (312/780 nt)	petC	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit
	?	NC_002947	= 1506453	75 (1.260)					coding (354/780 nt)	petC	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit

CACAGTGCCAAGTTCCAGCGCTACGAGCGGGTGGCTGACGACCTGGGTATCCCGCATGAACTGATGCTCGAGAAGCTGGTGTTCACAGGTGCCAAGATCGGTGACCACATGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1506259‑1506411 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggtACCGCGCACGCGGGCGACCAGTGTCAGGTCGGGCGGCGCAGCACCGAACCAGGTCTTGGCGTCGCTGGGCTTCATACCGATCTGCATGTGGTCACCGATCTTGGCACCTGTGAACACCAGCTTCTCGAGCATCAGTTCATGCGGGATA  <  NC_002947/1506453‑1506306                                                                                                                                                                                                                                                                                                               CACAGTGCCAAGTTCCAGCGCTACGAGCGGGTGGCTGACGACCTGGGTATCCCGCATGAACTGATGCTCGAGAAGCTGGTGTTCACAGGTGCCAAGATCGGTGACCACATGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTT                                                                                                                                                          >  5:14659/1‑149  ACAGTGCCAAGTTCCAGCGCTACGAGCGGGTGGCTGACGACCTGGGTATCCCGCATGAACTGATGCTCGAGAAGCTGGTGTTCACAGGTGCCAAGATCGGTGACCACATGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTC                                                                                                                                                         >  3:291165/1‑149    AGTGCCAAGTTCCACCGCTACGAGCGGGTGGCGGACGACCTGGGTATCCCGCATGAACTGATGCTCGAGAAGCTGGTGTTCACAGGTGCCAAGATCGGTGACCACATGCAGATCGGTATGAATCCCAGCGACGCCAAGACCTGGTTCGG                                                                                                                                                       <  7:243457/149‑1     GTGCCAAGTTCCAGCGCTACGAGCGGGTGGCTGACGACGTTGGTATCACTCATGAACTGATGCTCGAGAAGCTGGTGTTCACAGGTGCCAAGATCGGTGACCACATGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGT                                                                                                                                                      <  4:291165/149‑1                 AGCGCTACGAGCGGGTGGCTGACGACCTGGGTATCCCGCATGAACTGATGCTCGAGAAGCTGGTGTTCACAGGTGCCAAGATCGGTGACCACATGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTACCGCGCACGCG                                                                                                                                          >  3:204198/1‑149                                                  TCCCGCATGAACTGATGCTCGAGAAGCTGGTGTTCACAGGTGCCAAGATCGGTGACCACATGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTACCGCGCACGCGGGCGACCAGTGTCAGGTCGGGCGGCGCAGCAC                                                                                                          <  4:204198/148‑1                                                                    TCGAGAAGCTGGTGTTCACAGGTGCCAAGATCGGTGACCACATGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTACCGCGCACGCGGGCGACCAGTGTCAGGTCGGGCGGCGCAGCACCG                                                                                                        >  1:78056/1‑132                                                                    TCGAGAAGCTGGTGTTCACAGGTGCCAAGATCGGTGACCACATGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGTACCGCGCACGCGGGCGACCAGTGTCAGGTCGGGCGGCGCAGCACCG                                                                                                        <  2:78056/132‑1                                                                                                                                                         TACCGCGCACGCGGGCGACCAGTGTCAGGTCGGGCGGCGCAGCACCGAACCAGGTCTTGGCGTCGCTGGGCTTCATACCGATCTGCATGTGGTCACCGATCTTGGCACCTGTGAACACCAGCTTCTCGAGCATCAGTTCATGCGGGATA  <  1:189689/149‑1                                                                                                                                                                                                                                                                                                               CACAGTGCCAAGTTCCAGCGCTACGAGCGGGTGGCTGACGACCTGGGTATCCCGCATGAACTGATGCTCGAGAAGCTGGTGTTCACAGGTGCCAAGATCGGTGACCACATGCAGATCGGTATGAAGCCCAGCGACGCCAAGACCTGGTTCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1506259‑1506411 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggtACCGCGCACGCGGGCGACCAGTGTCAGGTCGGGCGGCGCAGCACCGAACCAGGTCTTGGCGTCGCTGGGCTTCATACCGATCTGCATGTGGTCACCGATCTTGGCACCTGTGAACACCAGCTTCTCGAGCATCAGTTCATGCGGGATA  <  NC_002947/1506453‑1506306

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.