| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1511842 | 54 (0.870) | 4 (0.070) | 4/254 | NT | 8.0% | coding (99/885 nt) | rsmI | 16S rRNA 2'‑O‑ribose C1402 methyltransferase |
| ? | NC_002947 | = 1511868 | 40 (0.680) | coding (125/885 nt) | rsmI | 16S rRNA 2'‑O‑ribose C1402 methyltransferase | |||||
GCCCTGTTGCAGGCGCTCGGGCTACAATGGCGCCTTTGATCCGAATGACAGGTGTGCGCAGTGACTGATGTGGCAGGGGCTTCGAAATCCACGGTGGGGACGCTGTATGTGGTGGCAACCCCCATCGGCAACCTCGACGACATGAGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1511693‑1511842‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgccACGTCCGCCAGCACCTTCAGCGCCCGGGCGCTCATGTCGTCGAGGTTGCCGATGGGGGTTGCCACCACATACAGCGTCCCCACCGTGGATTTCGAAGCCCCTGCCACATCAGTCACTGCGCACACCTGTCATTCGGATCAAAGGCGC < NC_002947/1511868‑1511722 GCCCTGTTGCAGGCGCTCGGGCTACAATGGCGCCTTTGATCCGAATGACAGGTGTGCGCAGTGACTGATGTGGCAGGGGCTTCGAAATCCACGGTGGGGACGCTGTATGTGGTGGCAACCCCCATCGGCAACCTCGACGACATGAGCGC > 5:65054/1‑149 GCGCCTTTGATCCGAATGACAGGTGTGCGCAGTGACTGATGTGGCAGGGGCTTCGAAATCCACGGTGGGGACGCTGTATGTGGTGGCAACCCCCATCGGCAACCTCGACGACATGAGCGCCACGTCCGCCAGCACCTTCAGCGCCCGG < 6:65054/148‑1 GATCAGAATGACAGGTGTGCGCAGTGACTGATGTGGCAGGGGCTTCGATATCCAGGGTGGGGAGGCTGTATGTTGTGGCAACCCCAATCGGCAACCTCGACGACATGAGCGCCACGTCCGCCAGCACCTTCAGAGCCCGGGCGCTCAT < 8:27339/148‑1 GAAATCCACGGTGGGGACGCTGTATGTGGTGGCAACCCCCATCGGCAACCTCGACGACATGAGCGCCACGTCCGCCAGCACCTTCAGCGCCCGGGC < 3:67052/96‑1 GAAATCCACGGTGGGGACGCTGTATGTGGTGGCAACCCCCATCGGCAACCTCGACGACATGAGCGCCACGTCCGCCAGCACCTTCAGCGCCCGGGC > 4:67052/1‑96 GCGCCACGTCCGCCAGCACCTTCAGCGCCCGGGCGCTCATGTCGTCGAGGTTGCCGATGGGGGTTGCCACCACATACAGCGTCCCCACCGTGGATTTCGAAGCCCCTGCCACATCAGTCACTGCGCACACCTGTCATTCGGATCAAAGG > 3:173320/1‑149 CCACGTCCGCCAGCACCTTCAGCGCCCGGGCGCTCATGTCGTCGAGGTTGCCGATGGGGGTTGCCACCACATACAGCGTCCCCACCGTGGATTTCGAAGCCCCTGCCACATCAGTCACTGCGCACACCTGTCATTCGGATCAAAGGCGC > 3:120264/1‑149 GCCCTGTTGCAGGCGCTCGGGCTACAATGGCGCCTTTGATCCGAATGACAGGTGTGCGCAGTGACTGATGTGGCAGGGGCTTCGAAATCCACGGTGGGGACGCTGTATGTGGTGGCAACCCCCATCGGCAACCTCGACGACATGAGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1511693‑1511842‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgccACGTCCGCCAGCACCTTCAGCGCCCGGGCGCTCATGTCGTCGAGGTTGCCGATGGGGGTTGCCACCACATACAGCGTCCCCACCGTGGATTTCGAAGCCCCTGCCACATCAGTCACTGCGCACACCTGTCATTCGGATCAAAGGCGC < NC_002947/1511868‑1511722 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |