| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1636406 = | 66 (1.060) | 4 (0.070) | 4/250 | NT | 6.2% | coding (583/684 nt) | recO | DNA repair protein RecO |
| ? | NC_002947 | 1636446 = | 58 (1.000) | coding (623/684 nt) | recO | DNA repair protein RecO | |||||
CTGTGAGTCACGAAAGGCTCTCCTGAAGATTGAGCCCAACAGCATACGTCCTGATCAGCGCTTGCGAAACAGTTCCCGGCTGACCAGCGGTTTTGCCCCCAGGTGAACTGCCAGTGCCTGGCGCATCAGCCGCTTTGCAGCGAGCAAGGCGCCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1636561‑1636406‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccaggCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCTTCAGGAGAGCCTTTCGTGACTCACAGCAACCGCATGCTTCTTGGCGTCAACATCGAC > NC_002947/1636446‑1636592 CTGTGAGTCACGAAAGGCTCTCCTGAAGATTGAGCCCAACAGCATACGTCCTGATCAGCGCTTGCGAAACAGTTCCCGGCTGACCAGCGGTTTTGCCCCCAGGTGAACTGCCAGTGCCTGGCGCATCAGCCGCTTTGCAGCGAGCAAGG < 5:213067/149‑1 TGAGTCACGAAAGGCTCTCCTGAAGATTGAGCCCAACAGCATACGTCCTGATCAGCGCTTGCGAAACAGTTCCCGGCTGACCAGCGGTTTTGCCCCCAGGTGAACTGCCAGTGCCTGGCGCATCAGCCGCTTTGCAGCGAGCAAGGC < 8:160087/147‑1 TCACGAAAGGCTCTCCTGAAGATTGAGCCCAACAGCATACGTCCTGATCAGCGCTTGCGAAACAGTTCCCGGCTGACCAGCGGTTTTGCCCCCAGGTGAACTGCCAGTGCCTGGCGCATCAGCCGCTTTGCAGCGAGCAAGGCGCCAGG > 3:318626/1‑149 GTGCCTGGCGCATCAGCCGCTTTGCAGCGAGCAAGGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCTTCAGGAGAGCCTTTCG > 7:235803/1‑149 CTGGCGCATCAGCCGCTTTGCAGAGAGCAAGGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCTTCAGGAGAG > 6:45168/1‑138 TGGCGCATCAGCCGCTTTGCAGCGAGCAAGGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCTTCAGGAGAGCCTTTCGTGACT > 5:338009/1‑149 GCATCAGCCGCTTTGCAGCGAGCAAGGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCTTCAGGAGAGCCTTTCGTGACTCACA < 8:235803/149‑1 GCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCTTCAGGAGAGCCTTTCGTGACTCACAGCAACCGCATGCTTCTTGGCGTCAACAT > 1:213187/1‑149 GGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCTTCAGGAGAGCCTTTCGTGACTCACAGCAACCGCATGCTTCTTGGCGTCAACATCGAC < 3:376552/149‑1 GCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCTTCAGGAGAGCCTTTCGTGACTCACAGCAACCGCATGCTTCTTGGCGTCAACATCGAC > 8:117914/1‑148 CTGTGAGTCACGAAAGGCTCTCCTGAAGATTGAGCCCAACAGCATACGTCCTGATCAGCGCTTGCGAAACAGTTCCCGGCTGACCAGCGGTTTTGCCCCCAGGTGAACTGCCAGTGCCTGGCGCATCAGCCGCTTTGCAGCGAGCAAGGCGCCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1636561‑1636406‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccaggCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCTTCAGGAGAGCCTTTCGTGACTCACAGCAACCGCATGCTTCTTGGCGTCAACATCGAC > NC_002947/1636446‑1636592 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |