New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1636406 =66 (1.060)4 (0.070) 4/250 NT 6.2% coding (583/684 nt) recO DNA repair protein RecO
?NC_002947 1636446 = 58 (1.000)coding (623/684 nt) recO DNA repair protein RecO

AACCAAGACGTCAACGACCAGCCGATTGCCGCCGACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCTTCAGGAGAGCCTTTCGTGA  >  NC_002947/1636259‑1636554
                                                                                                                                                   |                                                                                                                                                    
gtcgatgttgacgccaagaagcatgcggttgctgtgagtcacgaaaggctctcctgaagattgagcccaacagcatacgtcctgatcagcgcttgcgaaacagttcccggctgaccagcggttttgcccccaggtgaactgccagtgcc                                                                                                                                                     <  3:376552‑M1/2‑1 (MQ=255)
gtcgatgttgacgccaagaagcatgcggttgctgtgagtcacgaaaggctctcctgaagattgagcccaacagcatacgtcctgatcagcgcttgcgaaacagttcccggctgaccagcggttttgcccccaggtgaactgccagtgc                                                                                                                                                      >  8:117914‑M1/148‑148 (MQ=255)
aaCCAAGACGTCAACGACCAGCCGATTGCCGCCGACAGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACC                                                                                                                                                     >  1:64356‑M1/1‑149 (MQ=255)
 aCCAAGACGTCAACGACCAGCCGATAGACGCCGACGGCCAGTAACGCCTGCGCGTGGATCCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCAGGCCTGTTACGAGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACAGGCACGCACCT                                                                                                                                                    >  7:68799‑M1/1‑149 (MQ=255)
    atgttgacgccaagaagcatgcggttgctgtgagtcacgaaaggctctcctgaagattgagcccaacagcatacgtcctgatcagcgcttgcgaaacagttcccggctgaccagcggttttgcccccaggtgaactgccagtgCCTGgc                                                                                                                                                 >  1:213187‑M1/144‑149 (MQ=255)
     aGACGTCAACGACCAGCCGATTGCCGCCGACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCG                                                                                                                                                <  6:78103‑M1/149‑1 (MQ=255)
     aGACGTCAACGACCAGCCGATTGCCGCCGACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCG                                                                                                                                                >  5:304963‑M1/1‑149 (MQ=255)
              cGACCAGCCGATTGCCGCCGACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCg                                                                                                                                       >  1:160462/1‑149 (MQ=255)
               gACCAGCCGATTGCCGCCGACGGCCTGTATCGCCTGCGCGTGGATGCCGGCTTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGc                                                                                                                                      <  6:11538/149‑1 (MQ=255)
               gACCAGCCGATTGCCGCCGACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATTGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGc                                                                                                                                      <  1:100802/149‑1 (MQ=255)
                aCCAGCCGATTGCCGCCGACGGCCTGAATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCATCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCt                                                                                                                                     <  7:167321/149‑1 (MQ=255)
                        aTTGCCGCCGACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCg                                                                                                                             >  6:299179/1‑149 (MQ=255)
                           gccgccGACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGc                                                                                                                           <  6:187743/148‑1 (MQ=255)
                            ccgccgACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCt                                                                                                                                     >  1:58094/1‑137 (MQ=255)
                            ccgccgACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCt                                                                                                                                     <  2:58094/137‑1 (MQ=255)
                             cgccgACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCatcagccgctttgcagcgagc                                                                                                                          >  6:83294‑M1/1‑126 (MQ=255)
                             cgccgACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGa                                                                                                                        >  3:273785/1‑149 (MQ=255)
                              gccgACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGAt                                                                                                                       >  5:169323/1‑149 (MQ=255)
                              gccgACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGAt                                                                                                                       >  4:89270/1‑149 (MQ=255)
                               ccgACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGC                                                                                                                                               <  2:257795‑M1/124‑1 (MQ=255)
                               ccgACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGC                                                                                                                                               >  1:257795‑M1/1‑124 (MQ=255)
                                tgtgagtcacgaaaggctctcctgaagattgagcccaacagcatacgtcctgatcagcgcttgcgaaacagttcccggctgaccagcggttttgcccccaggtgaactgccagtgCCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATgc                                                                                                                     <  8:235803‑M1/34‑1 (MQ=255)
                                cGACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATgc                                                                                                                     <  3:214111‑M2/149‑3 (MQ=255)
                                cGACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATgc                                                                                                                     <  3:79901‑M2/149‑3 (MQ=255)
                                cGACGGCCTGTATCGCCTGCGCGGGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGGGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATgc                                                                                                                     >  8:68799‑M2/1‑147 (MQ=255)
                                   cGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGa                                                                                                                        <  5:29854/143‑1 (MQ=255)
                                   cGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGa                                                                                                                        >  6:29854/1‑143 (MQ=255)
                                    agtcacgaaaggctctcctgaagattgagcccaacagcatacgtcctgatcagcgcttgcgaaacagttcccggctgaccagcggttttgcccccaggtgaactgccagtgCCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCa                                                                                                                 >  5:338009‑M1/112‑149 (MQ=255)
                                     gCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCatcagccgctttgcagcgagcaaggcgccag                                                                                                                <  5:83294‑M1/149‑32 (MQ=255)
                                         gTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCAc                                                                                                            >  6:82313/1‑149 (MQ=255)
                                         cgaaaggctctcctgaagattgagcccaacagcatacgtcctgatcagcgcttgcgaaacagttcccggctgaccagcggttttgcccccaggtgaactgccagtgCCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCAc                                                                                                            >  7:235803‑M1/107‑149 (MQ=255)
                                          tATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGTCTGAAGCCGACTGGGACGCACCTGGCGCCTTACTCGCTGCAAAGCGGCTGATGCGCCAGGCACt                                                                                                           >  6:363815/1‑149 (MQ=255)
                                          tATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCAc                                                                                                            <  8:278501/148‑1 (MQ=255)
                                          tATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACAGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACt                                                                                                           >  2:345754/1‑149 (MQ=255)
                                            tCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTACTCGCTGCAAAGCGGCTGATGCGCCAGGCACTgg                                                                                                         <  5:363815/149‑1 (MQ=255)
                                              gCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGc                                                                                                        <  2:64356/148‑1 (MQ=255)
                                               ccTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCatcagccgctttgcagcgagcaaggcgccaggtg                                                                                                             >  8:39054‑M1/1‑108 (MQ=255)
                                               ccTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCatcagccgctttgcagcgagcaaggcgccaggtg                                                                                                             <  7:39054‑M1/142‑35 (MQ=255)
                                                ctctcctgaagattgagcccaacagcatacgtcctgatcagcgcttgcgaaacagttcccggctgaccagcggttttgcccccaggtgaactgccagtgCCTGGCGCCTTGCTCTCTGCAAAGCGGCTGATGCGCCAg                                                                                                                >  6:45168‑M1/100‑138 (MQ=255)
                                                    gcgTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCAc                                                                                                 <  4:273785/149‑1 (MQ=255)
                                                          aTGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTgggg                                                                                           >  8:287981/1‑149 (MQ=255)
                                                              cGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCa                                                                                        >  1:258143/1‑148 (MQ=255)
                                                                  cTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAAcc                                                                                   >  3:66409/1‑149 (MQ=255)
                                                                     gAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCg                                                                                  <  5:299179/147‑1 (MQ=255)
                                                                         gggTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGt                                                                             >  7:75669/1‑148 (MQ=255)
                                                                              gAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCg                                                                       >  2:298523/1‑149 (MQ=255)
                                                                                 cTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCggg                                                                     <  6:169323/148‑1 (MQ=255)
                                                                                  tGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGaa                                                                   >  8:39345/1‑149 (MQ=255)
                                                                                      gCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGt                                                               >  8:205321/1‑149 (MQ=255)
                                                                                       cAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGtt                                                              <  8:75669/149‑1 (MQ=255)
                                                                                       cAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGtt                                                              >  2:23314/1‑149 (MQ=255)
                                                                                         gCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTc                                                            <  8:38629/149‑1 (MQ=255)
                                                                                          cccGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTTGCTTAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGc                                                                         <  2:350296/135‑1 (MQ=255)
                                                                                          cccGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTCAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGc                                                                         >  1:350296/1‑135 (MQ=255)
                                                                                           ccGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGc                                                          <  6:304963/149‑1 (MQ=255)
                                                                                             ggCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCaa                                                        <  5:212632/149‑1 (MQ=255)
                                                                                             ggCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCaa                                                        <  2:258143/149‑1 (MQ=255)
                                                                                              gtcTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAg                                                       >  4:318626/3‑149 (MQ=255)
                                                                                               ccTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAgc                                                      <  5:82313/149‑1 (MQ=255)
                                                                                                   tttCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAgcgc                                                    <  7:205321/147‑1 (MQ=255)
                                                                                                   tttCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAgcgc                                                    <  8:188260/147‑1 (MQ=255)
                                                                                                     tCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGa                                                 <  6:143677/148‑1 (MQ=255)
                                                                                                        tGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAg                                             <  7:287981/149‑1 (MQ=255)
                                                                                                           gATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTc                                                            >  2:30751/1‑131 (MQ=255)
                                                                                                            aTCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACg                                         >  1:256413/1‑149 (MQ=255)
                                                                                                            aTCGAGTTGCTGGCCCTGCCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAAACGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACg                                         >  5:201983/1‑149 (MQ=255)
                                                                                                               gAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTAt                                      >  8:41980/1‑149 (MQ=255)
                                                                                                                    gCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTgggg                                                                                           >  5:62520/1‑91 (MQ=255)
                                                                                                                    gCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTgggg                                                                                           <  6:62520/91‑1 (MQ=255)
                                                                                                                     cTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGtt                                <  4:66409/149‑1 (MQ=255)
                                                                                                                     cTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGt                                 <  4:214111/148‑1 (MQ=255)
                                                                                                                     cTGGCCCTGGCGGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAACCCGCTGGTCAGACGGGAACTGTTTCGCAAGCGCTGCTCAGGACGTATGCGGtg                                >  2:316433/1‑148 (MQ=255)
                                                                                                                        gCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTggg                             <  1:386241/149‑1 (MQ=255)
                                                                                                                           cTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTc                          <  2:160462/149‑1 (MQ=255)
                                                                                                                              gCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCaa                        <  2:256413/148‑1 (MQ=255)
                                                                                                                                tGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCt                     >  8:6446/1‑149 (MQ=255)
                                                                                                                                 gAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCtt                    >  5:34755/1‑149 (MQ=255)
                                                                                                                                 gAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGAGCTGATCAGGACGTATGCTGTTGGGCTCAATCtt                    >  6:88095/1‑149 (MQ=255)
                                                                                                                                  aaGCCGGCTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCt                                   <  7:297473/133‑1 (MQ=255)
                                                                                                                                  aaGCCGGCTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCt                                   >  8:297473/1‑133 (MQ=255)
                                                                                                                                   aGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCaa                        <  1:353467/143‑1 (MQ=255)
                                                                                                                                   aGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCaa                        >  2:353467/1‑143 (MQ=255)
                                                                                                                                    gCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGaa                                                                   <  2:294263/99‑1 (MQ=255)
                                                                                                                                    gCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGaa                                                                   >  1:294263/1‑99 (MQ=255)
                                                                                                                                    gCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCTTCAg                 <  3:89270/149‑1 (MQ=255)
                                                                                                                                       gACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCTTCAGgag              >  3:368608/1‑149 (MQ=255)
                                                                                                                                                gCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCTTCAGGAGAGCCTTTCg     <  1:345754/149‑1 (MQ=255)
                                                                                                                                                gCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCTTCAGGAGAGCCTTTCg     >  6:363746/1‑149 (MQ=255)
                                                                                                                                                 cACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATgcgccaggtgcgtcccagtcggcttcagccagggccagcaactcgatcccacgaaacaggccgggctgcaacagctcgacccgctccaggccggcatccacgcgcagg           >  8:39054‑M2/1‑34 (MQ=255)
                                                                                                                                                 cACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATgcgccaggtgcgtcccagtcggcttcagccagggccagcaactcgatcccacgaaacaggccgggctgcaacagctcgacccgctccaggccggcatccacgcgcagg           <  7:39054‑M2/142‑109 (MQ=255)
                                                                                                                                                   CCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCTTCAGGAGAGCCTTTCGTGa  >  3:318626‑M1/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
AACCAAGACGTCAACGACCAGCCGATTGCCGCCGACGGCCTGTATCGCCTGCGCGTGGATGCCGGCCTGGAGCGGGTCGAGCTGTTGCAGCCCGGCCTGTTTCGTGGGATCGAGTTGCTGGCCCTGGCTGAAGCCGACTGGGACGCACCTGGCGCCTTGCTCGCTGCAAAGCGGCTGATGCGCCAGGCACTGGCAGTTCACCTGGGGGCAAAACCGCTGGTCAGCCGGGAACTGTTTCGCAAGCGCTGATCAGGACGTATGCTGTTGGGCTCAATCTTCAGGAGAGCCTTTCGTGA  >  NC_002947/1636259‑1636554

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.