| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1684586 = | 77 (1.240) | 4 (0.070) | 4/252 | NT | 5.1% | coding (286/333 nt) | hicB | HicB family nuclease |
| ? | NC_002947 | 1684636 = | 77 (1.310) | coding (236/333 nt) | hicB | HicB family nuclease | |||||
GCATTCGAAGAAGCTGTCGATGACTACATCGAGACTTGCGAAAAACTCGGAAGGGAACCTCAGAAAGCTTACTCGGGAAAGCTGAGCCTGCGTCTTGAACCTGCTCTTCACGCCAGCGTGGCTGCTAAAGCCGAACTGGCGGAAAAGAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1684736‑1684586‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagagcaGGTTCAAGACGCAGGCTCAGCTTTCCCGAGTAAGCTTTCTGAGGTTCCCTTCCGAGTTTTTCGCAAGTCTCGATGTAGTCATCGACAGCTTCTTCGAATGCTCGACGGAGCTCACTGATTGATTCACCGTGAAAGCCGATCACGTCAC > NC_002947/1684636‑1684783 GCATTCGAAGAAGCTGTCGATGACTACATCGAGACTTGCGAAAAACTCGGAAGGGAACCTCAGAAAGCTTACTCGGGAAAGCTGAGCCTGCGTCTTGAACCTGCTCTTCACGCCAGCGTGGCTGCTAAAGCCGAACTGGCGGAAAAGAG < 1:94164/149‑1GCATTCGAAGAAGCTGTCGATGACTACATCGAGACTTGCGAAAAACTCGGAAGGGAACCTCAGAAAGCTTACTCGGGAAAGCTGAGCCTGCGTCTTGAACCTGCTCTTCACGCCAGCGTGGCTGCTAAAGCCGAACTGGCGGAAAAGAG < 6:140530/149‑1 ATTCGAAGAAGCTGTCGATGACTACATCGAGACTTGCGAAAAACTCGGAAGGGAACCTCAGAAAGCTTACTCGGGAAAGCTGAGCCTGCGTCTTGAACCTGCTCTTCACGCCAGCGTGGCTGCTAAAGCCGAACTGGCGGAAAAGAGCA < 8:223875/149‑1 TCGGAAGGGAACCTCAGAAAGCTTACTCGGGAAAGCTGAGCCTGCGTCTTGAACCTGCTCTTCACGCCAGCGTGGCTGCTAAAGCCGAACTGGCGGAAAAGAGCA < 7:227698/105‑1 TCGGAAGGGAACCTCAGAAAGCTTACTCGGGAAAGCTGAGCCTGCGTCTTGAACCTGCTCTTCACGCCAGCGTGGCTGCTAAAGCCGAACTGGCGGAAAAGAGCA > 8:227698/1‑105 CCTGCTCTTCACGCCAGCGTGGCTGCTAAAGCCGAACTGGCGGAAAAGAGCAGGTTCAAGACGCAGGCTCAGCTTTCCAGAGTAAGCTTTCTGAGGTTCCCTTCCGAGTTTTTCGCAAGTCTCGATGTAGTCATCGACAGCTTCTTCG > 5:247853/1‑148 TTCACGCCAGCGTGGCTGCTAAAGCCGAACTGGCGGAAAAGAGCAGGTTCAAGACGCAGGCTCAGCTTTCCCGAGTAAGCTTTCTGAGGTTCCCTTCCGAGTTTTTCGCAAGTCTCGATGTAGTCATCGACAGCTTCTTCGAATGCTC > 7:357968/1‑148 CACGCCAGCGTGGCTGCTAAAGCCGAACTGGCGGAAAAGAGCAGGTTCAAGACGCAGGCTCAGCTTTCCAGAGTAAGCTTTCTGAGGTTCCCTTCCGAGTTTTTCGCAAGTCTCGATGTAGTCATCGACAGCTTCTTCGAATGCTCGA < 6:247853/148‑1 CTAAAGCCGAACTGGCGGAAAAGAGCAGGTTCAAGACGCAGGCTCAGCTTTCCCGAGTAAGCTTTCTGAGGTTCCCTTCCGAGTTTTTCGCAAGTCTCGATGTAGTCATCGACAGCTTCTTCGAATGCTCGACGGAGCTCACTGATTGA < 8:357968/149‑1 AAGAGCAGGTTCAAGACGCAGGCTCAGCTTTCCCGAGTAAGCTTTCTGAGGTTCCCTTCCGAGTTTTTCGCAAGTCTCGATGTAGTCATCGACAGCTTCTTCGAATGCTCGACGGAGCTCACTGATTGATTCACCGTGAAAGCCGATC < 2:325510/148‑1 AAGAGCAGGTTCAAGACGCAGCCTCAGCTTTCCCGAGTAAGCTTTCTGAGGTTCCCTTCCGAGTTTTTCGCAAGTCTCGATGTAGTCATCGACAGCTTCTTCGAATGCTCGACGGAGCTCACTGATTGATTCACCGTGAAAGCCGATC < 4:92000/148‑1 AGCAGGTTCAAGACGCAGGCTCAGCTTTCCCGAGTAAGCTTTCTGAGGTTCCCTTCCGAGTTTTTCGCAAGTCTCGATGTAGTCATCGACAGCTTCTTCGAATGCTCGACGGAGCTCACTGATTGATTCACCGTGAAAGCCGATCACGT > 6:209698/1‑149 AGGTTCAAGACGCAGGCTCAGCTTGCCCGAGTAAGCTTTCTGAGGTTCCCTTCCGAGTTTTTCGCAAGTCTCGATGTAGTCATCGACAGCTTCTTCGAATGCTCGACGGAGCTCACTGATTGATTCACCGTGAAAGCCGATCACGTCAC < 7:335890/149‑1 GCATTCGAAGAAGCTGTCGATGACTACATCGAGACTTGCGAAAAACTCGGAAGGGAACCTCAGAAAGCTTACTCGGGAAAGCTGAGCCTGCGTCTTGAACCTGCTCTTCACGCCAGCGTGGCTGCTAAAGCCGAACTGGCGGAAAAGAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1684736‑1684586‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagagcaGGTTCAAGACGCAGGCTCAGCTTTCCCGAGTAAGCTTTCTGAGGTTCCCTTCCGAGTTTTTCGCAAGTCTCGATGTAGTCATCGACAGCTTCTTCGAATGCTCGACGGAGCTCACTGATTGATTCACCGTGAAAGCCGATCACGTCAC > NC_002947/1684636‑1684783 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |