| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1856923 | 57 (0.920) | 6 (0.100) | 6/250 | NT | 10.4% | coding (102/2259 nt) | PP_1661 | dehydrogenase |
| ? | NC_002947 | = 1856949 | 50 (0.860) | coding (128/2259 nt) | PP_1661 | dehydrogenase | |||||
GCAATTCACCGGTGTCGACGCCAAGGAAGGGCAGCAGCCATGAGCAATGTACAAACCCAGAACATCGAAACCGCCGATGTGATCGTGGTGGGCGCCGGCATGGCCGGCAGTGTCATGGCCTACCAGTTGGGCCTGGCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1856783‑1856923‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccgggCCCGATTCGAGCACCAGCACTTTCAACCCGGCCAGGCCCAACTGGTAGGCCATGACACTGCCGGCCATGCCGGCGCCCACCACGATCACATCGGCGGTTTCGATGTTCTGGGTTTGTACATTGCTCATGGCTGCTGCCCTTCCTTGGC < NC_002947/1856949‑1856802 GCAATTCACCGGTGTCGACGCCAAGGAAGGGCAGCAGCCATGAGCAATGTACAAACCCAGAACATCGAAACCGCCGATGTGATCGTGGTGGGCGCCGGCATGGCCGGCAGTGTCATGGCCTACCAGTTGGGCCTGGCCGGGCCCGATTC > 7:100150/1‑149 ACGCCAAGGAAGGGCAGCAGCCATGAGCAATGTACAAACCCAGAACATCGAAACCGCCGATGTGATCGTGGTGGGCGCCGGCATGGCCGGCAGTGTCATGGCCTACCAGTTGGGCCTGGCC < 5:335212/121‑1 ACGCCAAGGAAGGGCAGCAGCCATGAGCAATGTACAAACCCAGAACATCGAAACCGCCGATGTGATCGTGGTGGGCGCCGGCATGGCCGGCAGTGTCATGGCCTACCAGTTGGGCCTGGCC > 6:335212/1‑121 AAGGGCAGCAGCCATGAGCAATGTACAAACCCAGAACATCGAAACCGCCGATGTGATCGTGGTGGGCGCCGGCATGGCCGGCAGTGTCATGGCCTACCAGTTGGGCCTGGCCGGGCCCGATTCGAGCACCAGCACTTTCAACCCGGCCA < 8:100150/149‑1 CCAGAACATCGAAACCGCCGATGTGATCGTGGTGGGCGCCGGCATGGCCGGCAGTGTCATGGCCTACCAGTTGGGCCTGGCCGGGCCCGATTCGAGCACCAGCACTTTCAACCCGGCCAG > 7:185116/1‑120 CCAGAACATCGAAACCGCCGATGTGATCGTGGTGGGCGCCGGCATGGCCGGCAGTGTCATGGCCTACCAGTTGGGCCTGGCCGGGCCCGATTCGAGCACCAGCACTTTCAACCCGGCCAG < 8:185116/120‑1 TCGTGGTGGGCGCCGGCATGGCCGGCAGTGTCATGGCCTACCAGTTGGGCCTGGCCGGGCCCGATTCGAGCACCAGCACTTTCAACCCGGCC > 7:271290/1‑92 TCGTGGTGGGCGCCGGCATGGCCGGCAGTGTCATGGCCTACCAGTTGGGCCTGGCCGGGCCCGATTCGAGCACCAGCACTTTCAACCCGGCC < 8:271290/92‑1 GCCGGGCCCGATTCGAGCACCAGCACTTTCAACCCGGCCAGGCCCAACTGGTAGGCCATGACACTGCCGGCCATGCCGGCGCCCACCACGATCACATCGGCGGTTTCGATGTTCTGGGTTTGTACATTGCTCATGGCTGCTGCCCTTCC < 6:9628/149‑1 GCCGGGCCCGATTCGAGCACCAGCACTTTCAACCCGGCCAGGCCCAACTGGTAGGCCATGACACTGCCGGCCATGCCGGCGCCCACCACGATCACATCGGCGGTTTCGATGTTCTGGGTTTGTACATTGCTCATGGATGCTGCCCTTCC > 3:355491/1‑149 CGGGCCCGATTCGAGCACCAGCACTTTCAACCCGGCCAGGCCCAACTGGTAGGCCATGACACTGCCGGCCATGCCGGCGCCCACCACGATCACATCGGCGGTTTCGATGTTCTGGGTTTGTACATTGCTCATGGCTGCTGCCCTTCCTT < 7:175747/149‑1 GCCCGATTCGAGCACCAGCACTTTCAACCCGGCCAGGCCCAACTGGTAGGCCATGACACTGCCGGCCATGCCGGCGCCCACCACGATCACATCGGCGGTTTCGATGTTCTGGGTTTGTACATTGCTCATGGCTGCTGCCCTTCCTTGGC < 8:153121/149‑1 GCAATTCACCGGTGTCGACGCCAAGGAAGGGCAGCAGCCATGAGCAATGTACAAACCCAGAACATCGAAACCGCCGATGTGATCGTGGTGGGCGCCGGCATGGCCGGCAGTGTCATGGCCTACCAGTTGGGCCTGGCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1856783‑1856923‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccgggCCCGATTCGAGCACCAGCACTTTCAACCCGGCCAGGCCCAACTGGTAGGCCATGACACTGCCGGCCATGCCGGCGCCCACCACGATCACATCGGCGGTTTCGATGTTCTGGGTTTGTACATTGCTCATGGCTGCTGCCCTTCCTTGGC < NC_002947/1856949‑1856802 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |