New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3000596	45 (0.730)	4 (0.070)	4/254	NT	7.7%	coding (400/504 nt)	PP_2624	hypothetical protein
	?	NC_002947	= 3000685	53 (0.900)					coding (311/504 nt)	PP_2624	hypothetical protein

GTGATGGCGGTGCTGCTTGGCTTGGGCATGGGGACGCTCCGTTGTCTCAATCTTTTTCTGGCGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3000446‑3000596 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccggACCGGATCGCGCGCCAGGTGCCCGAGCTGAACAAGCTGCTGGCGCTGCGCGAAGCACTGGTCGCCCTGAAAGGCCCGCTGGGCAACGTCCCGGCCTTCCGCAAGCAATTGCAGCACCTGCTTAACAACGAGCAGGCGCGTAAG  <  NC_002947/3000685‑3000543                                                                                                                                                                                                                                                                                                        GTGATGGCGGTGCTGCTTGGCTTGGGCATGGGGACGCTCCGTTGTCTCAATCTTTTTCTGGCGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCC                                                                                                                                                   >  1:129594/1‑149  TGATGGCGGTGCTGCTTGGCTTGGGCATGGGGACGCTCCGTTGTCTCAATCTTTTTCTGGCGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCG                                                                                                                                                  >  7:198836/1‑149                      TTGGGCATGGGGACGCTCCGTTGTCTCAATCTTTTTCTGGCGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGATGCAATTGCTTGCGGAAGGCCGGACCGGATCGCTCGCCAGGT                                                                                                                              >  7:161051/1‑149                                                   TCTTTTTCTGGCGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGACCGGATCGCGCGCCAGGTGCCCGAGCTGAACAAGCTGCTGGCGCTGC                                                                                                 >  3:152931/1‑149                                                                                                     ACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGACCGGATCGCGCGCCAGGTGCCCGAGCTGAACAAGCTGCTGGCGCTGCGCGAAGCACTGGTCGCCCTGAAAGGCCCGCTGGGCAACGTCCCGGCCTT                                                <  4:152931/148‑1                                                                                                      aGCGCCTGCTCGTTGTTAAGAAGGTGCTGCAATTGCTTGCGGAAGGCCGGACCGGATCGCGCTCCAGGTGCCCGAGCTGAACAAGCTGCTGGCGCTGCGCGAAGCACTGGTCGCCCTGAAAGGCCCGCTGGGCAACGTCCCGGCCTTCC                                              <  8:161051/148‑1                                                                                                                                                   GCCGGACCGGATCGCGCGCCAGGTGCCCGAGCTGAACAAGCTGCTGGCGCTGCGCGAAGCACTGGTCGCCCTGAAAGGCCCGCTGGGCAACGTCCCGGCCTTCCGCAAGCAATTGCAGCACCCGCTTAACAACGAGCAGGCGCGTAAG  >  4:176017/1‑148                                                                                                                                                                                                                                                                                                        GTGATGGCGGTGCTGCTTGGCTTGGGCATGGGGACGCTCCGTTGTCTCAATCTTTTTCTGGCGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3000446‑3000596 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccggACCGGATCGCGCGCCAGGTGCCCGAGCTGAACAAGCTGCTGGCGCTGCGCGAAGCACTGGTCGCCCTGAAAGGCCCGCTGGGCAACGTCCCGGCCTTCCGCAAGCAATTGCAGCACCTGCTTAACAACGAGCAGGCGCGTAAG  <  NC_002947/3000685‑3000543

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.