New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3000596 | 45 (0.730) | 4 (0.070) | 4/254 | NT | 7.7% | coding (400/504 nt) | PP_2624 | hypothetical protein |
? | NC_002947 | = 3000685 | 53 (0.900) | coding (311/504 nt) | PP_2624 | hypothetical protein |
ATGGCGGTGCTGCTTGGCTTGGGCATGGGGACGCTCCGTTGTCTCAATCTTTTTCTGGCGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCAGCGCCAGCAGCTTGTTCAGCTCGGGCACCTGGCGCGCGATCCGGTCCGGCCCGAAATCGTTGATGGACCTGAACTGCAGGTGGACGGCCAGCTCGGTATCCGG > NC_002947/3000449‑3000743 | aTGGCGGTGCTGCTTGGCTTGGTCATGGGGACGCTCCGTTGTCTCAATCTTTTTCTGGCGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCggg < 1:359193/149‑1 (MQ=255) gCGGTGCTGCTTGGCTTGGGCATGGGGACGCTCCGTTGTCTCAATCTTTTTCTGGCGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGAc < 2:75431/148‑1 (MQ=255) ggTGCTGCTTGGCTTGGGCATGGGGACGCTCCGTTGTCTCAATCTTTTTCTGGCGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGtt < 7:343106/149‑1 (MQ=255) gTGCTGCTTGGCTTGGGCATGGGGACGCTCCGTTGTCTCAATCTTTTTCTGGCGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTg < 3:295927/149‑1 (MQ=255) gTGCGGCTTGGCTGGGGCAGGGGGACGCTCCGTTGTCTCAATCTTTTTCTCGCGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTg < 8:135043/149‑1 (MQ=255) gcttggGCATGGGGACGCTCCGTTGTCTCAATCTTTTTCTGGCGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGc > 5:114170/1‑149 (MQ=255) ttggGCATGGGGACGCTCCGTTGTCTCAATCTTTTTCTGGCGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGtt < 7:223906/136‑1 (MQ=255) ttggGCATGGGGACGCTCCGTTGTCTCAATCTTTTTCTGGCGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGtt > 8:223906/1‑136 (MQ=255) ttggGCATGGGGACGCTCCGTTGTCTCAATCTTTTTCTGGCGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGATGCAATTGCTTGCGGAAGGCCGGaccggatcgctcgccaggt > 7:161051‑M1/1‑130 (MQ=255) ttggGCATGGGGACGCTCCGTTGTCTCAATCTTTTTCTGGAGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCACGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCt > 4:335740/1‑149 (MQ=255) ggCATGGGGACGCTCCGTTGTCTCAATCTTTTTCTGGCGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTc < 2:208092/149‑1 (MQ=255) gCATGGGGACGCTCCGTTGTCTCAATCTTTTTCTGGCGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCa < 1:49872/149‑1 (MQ=255) aTGGGGACGCTCCGTTGTCTCAATCTTTTTCTGGCGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAgg < 4:333239/149‑1 (MQ=255) gggACGCTCCGTTGTCTCAATCTTTTTCTGGCGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGc < 6:114170/148‑1 (MQ=255) ggACGCTCCGTTGTCTCAATCTTTTTCTGGCGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGa < 5:363491/149‑1 (MQ=255) ttGTCTCAATCTTTTTCTGGCGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTc < 7:16032/149‑1 (MQ=255) tctcAATCTTTTTCTGGCGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCGGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTcgcg > 3:176017/1‑149 (MQ=255) ctcAATCTTTTTCTGGCGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTcgcg > 3:150781/1‑148 (MQ=255) tcAATCTTTTTCTGGCGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTcgcg > 5:190133/1‑147 (MQ=255) tcAATCTTTTTCTGGCGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTcgcg > 3:316464/1‑147 (MQ=255) tcAATCTTTTTCTGGCGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCa > 8:330288/1‑149 (MQ=255) aaTCTTTTTCTGGCGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCAgc > 5:87554/1‑149 (MQ=255) tCTTTTTCTGGCGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGaccggatcgcgcgccaggtgcccgagctgaacaagctgctggcgctgc > 3:152931‑M1/1‑101 (MQ=255) tttttCTGGCGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCAGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCAGCGCca > 4:144721/1‑149 (MQ=255) ccTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCAGCGCCAGCAGCTTGTTc < 6:87554/149‑1 (MQ=255) gTCCAGTTCTTGGGCGAGCTGCTTACGCGCCCGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCAGCGCCAGCAGCTTGTTCAGCTCGGGCACCt > 5:293415/1‑149 (MQ=255) cAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCAGCGCCAGCAGCTTGTTCAGCTCGGGCACCTGgc > 3:78688/1‑149 (MQ=255) gTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCAGCGCCAGCAGCTTGTTCAGCTCgg < 7:305696/138‑1 (MQ=255) gTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCAGCGCCAGCAGCTTGTTCAGCTCgg > 8:305696/1‑138 (MQ=255) gggCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCAGCGCCAGCAGCTTGTTCAGCTCGGGCACCTGGCGCGCGAtc > 3:191033/1‑149 (MQ=255) ctTACGCGCCTGCTCGTTGTTAAGCGGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCAGCGCCAGCAGCTTGTTCAGCTCGGGCACCTGGCGCGCGATCCGGTccggc > 4:176017‑M2/1‑143 (MQ=255) aCGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGaccggatcgcgcgccaggtgcccgagctgaacaagctgctggcgctgcgcgaagcactggtcgccctgaaaggcccgctgggcaacgtcccggcctt < 4:152931‑M1/148‑98 (MQ=255) agcgccTGCTCGTTGTTAAGAAGGTGCTGCAATTGCTTGCGGAAGGCCGGaccggatcgcgctccaggtgcccgagctgaacaagctgctggcgctgcgcgaagcactggtcgccctgaaaggcccgctgggcaacgtcccggccttcc < 8:161051‑M1/148‑100 (MQ=255) cgcCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCAGCGCCAGCAGCTTGTTCAGCTCGGGCACCTGGCGCGCGATCCGGTCCGGCCCGAAAt > 8:307273/1‑149 (MQ=255) gcCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCAGCGCCAGCAGCTTGTTCAGCTCGGGCACCTGGCGCGCGATCCGGTCCGGCCCGAAATc > 4:246353/1‑149 (MQ=255) gcCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCAGCGCCAGCAGCTTGTTCAGCTCGGGCACCTGGCGCGCGATCCGGTCCGGCCCGAAATc < 8:198836/149‑1 (MQ=255) ccTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCAGCGCCAGCAGCTTGTTCAGCTCGGGCACCTGGCGCGCGATCCGGTCCGGCCCGAAATCg > 3:227252/1‑149 (MQ=255) cTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCAGCGCCAGCAGCTTGTTCAGCTCGGGCACCTGGCGCGCGATCCGGTCCGGCCCGAAATCGtt < 3:144721/147‑1 (MQ=255) cTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCAGCGCCAGCAGCTTGTTCAGCTCGGGCACCTGGCGCGCGATCCGGTCCGGCCCGAAATCGtt < 2:313179/147‑1 (MQ=255) cGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCAGCGCCAGCAGCTTGTTCAGCTCGGGCACCTGGCGCGCGATCCGGTCCGGCCCGAAATCGTTGATg > 5:118908/1‑149 (MQ=255) gttgttAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCa < 4:220634/71‑1 (MQ=255) gttgttAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCa > 3:220634/1‑71 (MQ=255) gttAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCAGCGCCAGCAGCTTGTTCAGCTCGGGCACCTGGCGCGCGATCCGGTCCGGCCCGAAATCGTTGATGGAcc > 2:336917/1‑149 (MQ=255) gCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCAGCGCCAGCAGCTTGTTCAGCTCGGGCACCTGGCGCGCGATCCGGTCCGGCCCGAAATCGTTGATGGACCTGAAc > 5:65865/1‑149 (MQ=255) cAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCAGCGCCAGCAGCTTGTTCAGCTCGGGCACCTGGCGCGCGATCCGGTCCGGCCCGAAATCGTTGATGGACCTGAACt < 3:335740/149‑1 (MQ=255) gccgcAATTGCTTGCGGAAGGCCGGGAGGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCAGCGCCAGCAGCTTGTTCAGCTCGGGCACCTGGCGCGCGATCGGGTCCGGCCCGAAATCGt < 8:317639/126‑1 (MQ=255) gcAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCAGCGCCAGCAGCTTGTTCAGCTCGGGCACCTGGCGCGCGATCCGGTCCGGCCCGAAATCGTTGATGGACCTGAACTGCAGGTgg > 4:237683/1‑149 (MQ=255) aaTTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCAGCGCCAGCAGCTTGTTCAGCTCGGGCACCTGGCGCGCGATCCGGTCCGGCCCGAAATCGTTGAt < 2:202162/128‑1 (MQ=255) aaTTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCAGCGCCAGCAGCTTGTTCAGCTCGGGCACCTGGCGCGCGATCCGGTCCGGCCCGAAATCGTTGAt > 1:202162/1‑128 (MQ=255) cttgcGGAAGGCCGGGACCTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCAGCGCCAGCAGCTTGTTCAGCTCGGGCACCTGGCGCGCGATCCGGTCCGGCCCGAAATCGTTGATGGACCTGAACTGCAGGTGGACGGc > 1:345370/1‑147 (MQ=255) ttgcGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCAGCGCCAGCAGCTTGTTCAGCTCGGGCACCTGGCGCGCGATCCGGTCCGGCCCGAAATCGTTGATGGACCTGAACTGCAGGTGGACGGCCAg > 6:176913/1‑149 (MQ=255) ggAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCAGCGCCAGCAGCTTGTTCAGCTCGGGCACCTGGCGCGCGATCCGGTCCGGCCCGAAATCGTTGATGGACCTGAACTGCAGGTGGACGGCCAGCTCg < 4:316464/149‑1 (MQ=255) ggAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCAGCGCCAGCAGCTTGTTCAGCTCGGGCACCTGGAGCGCGATCCGGTccggccttccgcaagcaattgcagcaccttcttaacaacgagcaggcgct < 8:161051‑M2/149‑51 (MQ=255) aaGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCAGCGCCAGCAGCTTGTTCAGCTCGGGCACCTGGCGCGCGATCCGGTccggccttccgcaagcaattgcagcacctgcttaacaacgagcaggcgcgt < 4:152931‑M2/148‑52 (MQ=255) gCCGGaccggatcgcgcgccaggtgcccgagctgaacaagctgctggcgctgcgcgaagcactggtcgccctgaaaggcccgctgggcaacgtcccggccttccgcaagcaattgcagcacccgcttaacaacgagcaggcgcgtaag > 4:176017‑M1/1‑5 (MQ=255) gggACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCAGCGCCAGCAGCTTGTTCAGCTCGGGCACCTGGCGCGCGATCCGGTCCGGCCCGAAATCGTTGATGGACCTGAACTGCAGGTGGACGGCCAGCTCGGTATCCgg < 7:307273/149‑1 (MQ=255) | ATGGCGGTGCTGCTTGGCTTGGGCATGGGGACGCTCCGTTGTCTCAATCTTTTTCTGGCGCCTCGAGCACCAGGTCCAGTTCTTGGGCGAGCTGCTTACGCGCCTGCTCGTTGTTAAGCAGGTGCTGCAATTGCTTGCGGAAGGCCGGGACGTTGCCCAGCGGGCCTTTCAGGGCGACCAGTGCTTCGCGCAGCGCCAGCAGCTTGTTCAGCTCGGGCACCTGGCGCGCGATCCGGTCCGGCCCGAAATCGTTGATGGACCTGAACTGCAGGTGGACGGCCAGCTCGGTATCCGG > NC_002947/3000449‑3000743 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |