| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3036448 = | 56 (0.900) | 5 (0.080) | 5/258 | NT | 8.8% | intergenic (‑38/+197) | PP_2648/PP_2649 | universal stress protein family protein/LysR family transcriptional regulator |
| ? | NC_002947 | 3036480 = | 49 (0.820) | intergenic (‑70/+165) | PP_2648/PP_2649 | universal stress protein family protein/LysR family transcriptional regulator | |||||
GGGTCAAGACGGTAATGAGGCAGCCCGCCAGCCCTGGGTAATCAGCCTTGCAGCTACACCGGCAGTGCTGTTGGCAGGCATGACCTGCCGCTACACCTGCACGCCATTGACCCAAATCAAGCCCTCGCGCCGGGTTCGCGCGACGATGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3036598‑3036448‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctTGATTTGGGTCAATGGCGTGCAGGTGTAGCGGCAGGTCATGCCTGCCAACAGCACTGCCGGTGTAGCTGCAAGGCTGATTACCCAGGGCTGGCGGGCTGCCTCATTACCGTCTTGACCCTCAGCCTTTCAGCCCGGA > NC_002947/3036480‑3036616 GGGTCAAGACGGTAATGAGGCAGCCCGCCAGCCCTGGGTAATCAGCCTTGCAGCTACACCGGCAGTGCTGTTGGCAGGCATGACCTGCCGCTACACCTGCACGCCATTGACCCAAATCAAGCCCTCGCGCCGGGTTCGCGCGACGATGG > 5:176137/1‑149 CGCCATTGACCCAAATCAAGCCCTCGCGCCGGGTTCGCGCGACGATGGCTTGATTTGGGTCAATGGCGTGCAGGTGTAGCGGCAGGTCATGCCTGCCAACAGCACTGCCGGTGTAGCTGCAAGGCTGATTACCCAGGGCTGGCGGGCTG > 6:69037/1‑149 CCAAATCAAGCCCTCGCGCCGGGTTCGCGCGACGATGGCTTGATTTGGGTCAATGGCGTGCAGGTGTAGCGGCAGGTCATGCCTGCCAACAGCACTGCCGGTGTAGCTGCAAGGCTGATTACCCAGGGCTGGCGGGCTGCCTCATTACC > 4:185214/1‑149 AAATCAAGCCCTCGCGCCGGGTTCGCGCGACGATGGCTTGAGTTGGGTCAATGGCGTGCAGGTGTAGCGGCAGGTCATGCCTGCCAACAGCACTGCCGGTGTAGCTGCAAGGCTGATTACCCAGGGCTGGCGGGCTGCCTCATTACCGT > 7:246208/1‑149 AAGCCCTCGCGCCGGGTTCGCGCGACGATGGCTTGATTTGGGTCAATGGCGTGCAGGTGTAGCGGCAGGTCATGCCTGCCAACAGCACTGCCGGTGTAGCTGCAAGGCTGATTACCCAGGGCTGGCGGGCTGCCTCATTACCGTCTTGA < 3:185214/149‑1 GCGACGATGGCTTGATTTGGGTCAATGGCGTGCAGGTGTAGCGGCAGGTCATGCCTGCCAACAGCACTGCCGGTGTAGCTGCAAGGCTGATTACCCAGGGCTGGCGGGCTGCCTCATTACCGTCTTGACCCTCAGCCTTTCAGCCCGGA < 5:69037/149‑1 GGGTCAAGACGGTAATGAGGCAGCCCGCCAGCCCTGGGTAATCAGCCTTGCAGCTACACCGGCAGTGCTGTTGGCAGGCATGACCTGCCGCTACACCTGCACGCCATTGACCCAAATCAAGCCCTCGCGCCGGGTTCGCGCGACGATGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3036598‑3036448‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctTGATTTGGGTCAATGGCGTGCAGGTGTAGCGGCAGGTCATGCCTGCCAACAGCACTGCCGGTGTAGCTGCAAGGCTGATTACCCAGGGCTGGCGGGCTGCCTCATTACCGTCTTGACCCTCAGCCTTTCAGCCCGGA > NC_002947/3036480‑3036616 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |