New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3248985	56 (0.900)	3 (0.050)	3/260	NT	5.4%	coding (605/1704 nt)	ureC	urease subunit alpha
	?	NC_002947	= 3249023	50 (0.830)					coding (643/1704 nt)	ureC	urease subunit alpha

CACGTTCATCGGCGGTGGAACCGGGCCGGCCACTGGCACCAATGCCACCACCTGCACGCCCGGCCCCTGGTACCTTGCGCGCATGTTGCAGGCTGCCGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3248836‑3248985 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccCGACAGCGCCTGCGGCAATCTGCTCGCGCAGCGCGTCTGGCCGCGAGGCATTGCCCTTGCCCAGCAGCCCGATGTTGATCGGCAAGCTGTCGGCAGCCTGCAACATGCGCGCAAGGTACCAGGGGCCGGGCGTGCAGGTGGTGGCATT  <  NC_002947/3249023‑3248876                                                                                                                                                                                                                                                                                                            CACGTTCATCGGCGGTGGAACCGGGCCGGCCACTGGCACCAATGCCACCACCTGCACGCCCGGCCCCTGGTACCTTGCGCGCATGTTGCAGGCTGCCGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGC                                                                                                                                                       >  6:82284/1‑149    GTTCATCGGCGGTGGAACCGGGCCGGCCACTGGCACCAATGCCACCACCTGCACGCCCGGCCCCTGGTACCTTGCGCGCATGTTGCAGGCTGCCGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCCG                                                                                                                                                    >  8:326902/1‑149                                                 CACCTGCACGCCCGGCCCCTGGTACCTTGCGCGCATGTTGCAGGCTGCCGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCCGACAGCGCCTGCGGCAATCTGCTCGCGCAGCGCGTCTGGCCGCGAG                                                                                                       <  7:326902/149‑1                                                    CTGCACGCCCGGCCCCTGGTACCTTGCGCGCATGTTGCAGGCTGCCGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCCGACAGCGCCTGCGGCAATCTGCTCGCGCAGCGCGTCTGGCCGCGA                                                                                                        >  1:273564/1‑145                                                    CTGCACGCCCGGCCCCTGGTACCTTGCGCGCATGTTGCAGGCTGCCGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCCGACAGCGCCTGCGGCAATCTGCTCGCGCAGCGCGTCTGGCCGCGA                                                                                                        <  2:273564/145‑1                                                                                                                                                     CCCGACAGCGCCTGCGGCAATCTGCTCGCGCAGCGCGTCTGGCCGCGAGGCATTGCCCTTGCCCAGCAGCCCGATGTTGATCGGCAAGCTGTCGGCAGCCTGCAACATGCGCGCAAGGTACCAGGGGCCGGGCGTGCAGGTGGTGGCAT   <  6:194072/149‑1                                                                                                                                                      CCGACAGCGCCTGCGGCAATCTGCTCGCGGAGCGCGTCTGGCCGCGAGGCATTGCCCTTGCCCAGCAGCCCGATGTTGATCGGCAAGCTGTCGGCAGCCTGCAACATGCGCGCAAGGTACCAGGGGCCGGGCGTGCAGGTGGTGGCATT  <  8:92902/149‑1                                                                                                                                                      CCGACAGCGCCTGCGGCAATCTGCTCGCGCAGCGCGTCTGGCCGCGAGGCATTGCCCTTGCCCAGCAGCCCGATGTTGATCGGCAAGCTGTCGGCAGCCTGCAACATGCGCGCAAGGTACCAGGGGCCGGGCGTGCAGGTGGTGGCATT  <  2:18194/149‑1                                                                                                                                                                                                                                                                                                            CACGTTCATCGGCGGTGGAACCGGGCCGGCCACTGGCACCAATGCCACCACCTGCACGCCCGGCCCCTGGTACCTTGCGCGCATGTTGCAGGCTGCCGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3248836‑3248985 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccCGACAGCGCCTGCGGCAATCTGCTCGCGCAGCGCGTCTGGCCGCGAGGCATTGCCCTTGCCCAGCAGCCCGATGTTGATCGGCAAGCTGTCGGCAGCCTGCAACATGCGCGCAAGGTACCAGGGGCCGGGCGTGCAGGTGGTGGCATT  <  NC_002947/3249023‑3248876

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.