| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3311167 = | 57 (0.920) | 3 (0.050) | 3/256 | NT | 5.3% | coding (881/1392 nt) | gabP‑III | gamma‑aminobutyrate permease |
| ? | NC_002947 | 3311203 = | 52 (0.870) | coding (917/1392 nt) | gabP‑III | gamma‑aminobutyrate permease | |||||
GAATGCAGCCCCAGTCGACAACAAGACTGCCACCACGGGTGTACCACTGCGGCTGGTTATCTGGGCACAGGCCGGGGCATCACCCCGGCGGCTAAGCGAATAGACCATGCGCGAGGCGGTGTACAGCGACGAGTTGAGGCAGCTGGTCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3311318‑3311167‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccgCCTCGCGCATGGTCTATTCGCTTAGCCGCCGGGGTGATGCCCCGGCCTGTGCCCAGATAACCAGCCGCAGTGGTACACCCGTGGTGGCAGTCTTGTTGTCGACTGGGGCTGCATTCCTGGCGGTGATCGCCAACTACCTGGTGCCGG > NC_002947/3311203‑3311349 GAATGCAGCCCCAGTCGACAACAAGACTGCCACCACGGGTGTACCACTGCGGCTGGTTATCTGGGCACAGGCCGGGGCATCACCCCGGCGGCTAAGCGAATAGACCATGCGCGAGGCGGTGTACAGCGACGAGTTGAGGCAGCTGGTCA < 3:299154/149‑1 ATGCAGCCCCAGTCGACAACAAGACTGCCACCACGGGTGTACCACTGCGGCTGGTTATCTGGGCACAGGCCGGGGCATCACCCCGGCGGCTAAGCGAATAGACCATGCGCGAGGCGGTGTACAGCGACGAGTTGAGGCAGCTGGTCACC < 5:248796/149‑1 GCGAGGCGGTGTACAGCGACGAGTTGAGGCAGCTGGTCACCGCCTCGCGCATGGTCTATTCGCTTAGCCGCCGGGGTGATGCCCCGGCCTGTGCCCAGATAACCAGCCGCAGTGGTACACCCGT < 3:266488/124‑1 GCGAGGCGGTGTACAGCGACGAGTTGAGGCAGCTGGTCACCGCCTCGCGCATGGTCTATTCGCTTAGCCGCCGGGGTGATGCCCCGGCCTGTGCCCAGATAACCAGCCGCAGTGGTACACCCGT > 4:266488/1‑124 GAGGCGGTGTACAGCGACGAGTTGAGGCAGCTGGTCACCGCCTCGCGCATGGTCTATTCGCTTAGCCGCCGGGGTGATGCCCCGGCCTGTGCCCAGATAACCAGCCGCAGTGGTACACCCGTGGTGGCAGTCTTGTTGTCGACTGGGGC > 5:350769/1‑149 ACCGCCTCGCGCATGGTCTATTCGCTTAGCCGCCGGGGTGATGCCCCGGCCTGTGCCCAGATAACCAGCCGCAGTGGTACACCCGTGGTGGCAGTCTTGTTGTCGACTGGGGCTGCATTCCTGGCGGTGATCGCCAACTACCTGGTGCC < 7:127117/149‑1 CGCCTCGCGCATGGTCTATTCGCTTAGCCGCCGGGGTGATGCCCCGGCCTGTGCCCAGATAACCAGCCGCAGTGGTACACCCGTGGTGGCAGTCTTGTTGTCGACTGGGGCTGCATTCCTGGCGGTGATCGCCAACTACCTGGTGCCGG < 1:361795/149‑1 GAATGCAGCCCCAGTCGACAACAAGACTGCCACCACGGGTGTACCACTGCGGCTGGTTATCTGGGCACAGGCCGGGGCATCACCCCGGCGGCTAAGCGAATAGACCATGCGCGAGGCGGTGTACAGCGACGAGTTGAGGCAGCTGGTCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3311318‑3311167‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccgCCTCGCGCATGGTCTATTCGCTTAGCCGCCGGGGTGATGCCCCGGCCTGTGCCCAGATAACCAGCCGCAGTGGTACACCCGTGGTGGCAGTCTTGTTGTCGACTGGGGCTGCATTCCTGGCGGTGATCGCCAACTACCTGGTGCCGG > NC_002947/3311203‑3311349 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |