| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3338783 | 55 (0.890) | 4 (0.070) | 3/252 | NT | 6.7% | coding (216/1194 nt) | PP_2935 | membrane protein |
| ? | NC_002947 | = 3338813 | 59 (1.000) | coding (186/1194 nt) | PP_2935 | membrane protein | |||||
CAGCAAACGTCCACCGAGCAGCAGTGCCAGGCTCAGCAGCGGTAAGGTGAGGGTCCAGGCTGACAGCAACGTCAACACCCCGCAACCGGCAATCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3338630‑3338783‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgcaGTACCTGGCCACGCTGCTGAGCCGCCCGTTTGCAGGCAGGGTGGCGGACACCTTGGGAGGGAAACAGGCCATCCGCTTTGGCTTGCTGGGGATTGCCGGTTGCGGGGTGTTGACGTTGCTGTCAGCCTGGACCCTCACCTTACCGC < NC_002947/3338813‑3338668 CAGCAAACGTCCACCGAGCAGCAGTGCCAGGCTCAGCAGCGGTAAGGGGAGGGTCCAGGCTGACAGCAACGTCAACACCCCGCAACCGGCAATCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGC < 6:157036/149‑1 CAAACGTCCACCGAGCAGCAGTGCCAGGCTCAGCAGCGGTAAGGTGAGGGTCCAGGCTGACAGCAACGTCAACCCCCCGCAACAGGCAATCCCCAGCAAGCCAAAGCGGATGTCCTGTTTGCCTGCCAAGGTGTCCGCCACCCTGCGTG > 8:264920/1‑149 AAACGTCCACCGAGCAGCAGTGCCAGGCTCAGCAGCGGTAAGGTGAGGGTCCAGGCTGACAGCAACGTCAACACCCCGCAACCGGCAATCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGC < 2:95223/149‑1 AGGTGAGGGTCCAGGCTGACAGCAACGTCAACACCCCGCAACCGGCAATCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAGTACCTGGCCACGCTGCTGAGCCGCCCGTTTGCAGGCA < 3:337033/148‑1 GGTGAGGGTCCAGGCGGACAGCAACGTCAACACCCCGCAACCGGCAATCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAGTACCTGGCCACGCTGCTGAGCCGCCCGTTTGCAGGCAGG < 2:385406/149‑1 GTCGAGGCTGACAGCAACGTCAACACGCCGCAAGCGGCAATGCCGAGGAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTACGCAACCCTGCCTGCAGTACCTGGCCACGCTGCTGAGCCGCCCGTTTGCAGGCA < 2:358735/140‑1 GTCCAGGCTGACAGCCACGTCAACACCCCGCAACCGGCAATCCCCAGCAACCCAAAGCGGAAGGCCAGTTTCCCTCCCAAGCTGTCCGCCACCCAGCCTGCAGAACCTGGCCACGCAGCTGAGCCGCCCGTTTGCAGGCA > 1:358735/1‑140 AACGTCAACACCCCGCAACCGGCAATCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTG > 3:143215/1‑85 AACGTCAACACCCCGCAACCGGCAATCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTG < 4:143215/85‑1 CTGCAGTACCTGGCCACGCTGCTGAGCCGCCCGTTTGCAGGCAGGGTGGCGGACACCTTGGGAGGGAAACAGGCCATCCGCTTTGGCTTGCTGGGGATTGCCGGTTGCGGGGTGTTGACGTTGCTGTCAGCCTGGACCCTCACCTTACC > 7:264920/1‑149 GCAGTACCTGGCCACGCTGCTGAGCCGCCCGTTTGCAGGCAGGGTGGCGGACACCTTGGGAGGGAAACAGGCCATCCGCTTTGGCTTGCTGGGGATTGCCGGTTGCGGGGTGTTGACGTTGCTGTCAGCCTGGACCCTCACCTTACCGC > 3:45703/1‑149 CAGCAAACGTCCACCGAGCAGCAGTGCCAGGCTCAGCAGCGGTAAGGTGAGGGTCCAGGCTGACAGCAACGTCAACACCCCGCAACCGGCAATCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3338630‑3338783‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgcaGTACCTGGCCACGCTGCTGAGCCGCCCGTTTGCAGGCAGGGTGGCGGACACCTTGGGAGGGAAACAGGCCATCCGCTTTGGCTTGCTGGGGATTGCCGGTTGCGGGGTGTTGACGTTGCTGTCAGCCTGGACCCTCACCTTACCGC < NC_002947/3338813‑3338668 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |