New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3338783	55 (0.890)	4 (0.070)	3/252	NT	6.7%	coding (216/1194 nt)	PP_2935	membrane protein
	?	NC_002947	= 3338813	59 (1.000)					coding (186/1194 nt)	PP_2935	membrane protein

GCGGTAAGGTGAGGGTCCAGGCTGACAGCAACGTCAACACCCCGCAACCGGCAATCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑GGCAGCACCGCAATCGGCAGGCCGATGCAGAGGAAGGCAATGAAGGTATAGAAAACGATCGACAGGATCTGCAGGGTGA  >  NC_002947/3338668‑3338955                                                                                                                                                  |                                                                                                                                                gCGGTAAGGTGAGGGTCCAGGCTGACAGCAACGTCAACACCCCGCAACCGGCAATCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACtgc                                                                                                                                              >  3:45703‑M2/1‑146 (MQ=255)   ggTAAGGTGAGGGTCCAGGCTGACAGCAACGTCAACACCCCGCAACCGGCAATCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACtgcag                                                                                                                                            >  7:264920‑M2/1‑144 (MQ=255)         gTGAGGGTCCAGGCTGACAGCAACGTCAACACCCCGCAACCGGCAATCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAAt                                                                                                                                      >  8:332577/1‑149 (MQ=255)         gTGAGGGTCCAGGCTGACAGCAACGTCAACACCCCGCAACCGGCAATCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAAt                                                                                                                                      >  3:215179/1‑149 (MQ=255)            aGGGTCCAGGCTGACAGCAACGTCAACACCCCGCAACCGGCAATCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGt                                                                                                                                   <  7:97677/149‑1 (MQ=255)            aGGGTCCAGGCTGACAGCAACGTCAACACCCCGCAACCGGCAATCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGt                                                                                                                                   >  7:133699/1‑149 (MQ=255)             gggTCGAGGCTCACAGCAACGCCACCCCCCCGGAACCGGCAATGCCCAGCAAGCCTAAGCGGATGGCCTGTTTGCCTCCCAAGGTGTCCGCCACCCTGCCTCCAACCGCGCGGCTCAGCTGCGTGGCCAGGTACTGCAGGCCAATGGtt                                                                                                                                  <  6:278269/149‑1 (MQ=255)                tCCAGGCTGACAGCAACGTCAACACCCCGCAACCGGCAATCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTaca                                                                                                                               >  5:264085/1‑149 (MQ=255)                  cAGGCTGACAGCAACGTCAACACCCCGCAACCGGCAATCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACAcc                                                                                                                             >  2:69478/1‑149 (MQ=255)                       tGACAGCAACGTCAACACCCCGCAACCGGCAATCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACGCCGGCGa                                                                                                                        >  4:122281/1‑149 (MQ=255)                        gACAGCAACGTCAACACCCCGCAACCGGCAATCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGAt                                                                                                                       >  1:381829/1‑149 (MQ=255)                              accctCAACACCCCCCAACCGGCAATCCCCCGCAAGCCAAAGCGCATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTgc                                                                                                                 <  4:270371/145‑1 (MQ=255)                                    aaCACCCCGCAACCGGCAATCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCaaa                                                                                                           >  6:277143/1‑149 (MQ=255)                                     acacCCCGCAACCGGCAATCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAg                                                                                                          >  5:158620/1‑149 (MQ=255)                                      cacCCCGCAACCGGCAATCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGc                                                                                                         >  5:348805/1‑149 (MQ=255)                                          ccGCAACCGGCAATCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAg                                                                                                     >  8:102366/1‑149 (MQ=255)                                                  ggCAATCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGt                                                                                             >  1:262153/1‑149 (MQ=255)                                                  ggCAATCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGt                                                                                             >  5:217669/1‑149 (MQ=255)                                                  ggCAATCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGt                                                                                             <  4:215179/149‑1 (MQ=255)                                                    cAATCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGc                                                                                           <  7:332577/149‑1 (MQ=255)                                                     aaTCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTTCAAACGGGCGGCTCAGCAGCGTGGCCAGGGACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGca                                                                                          <  7:362423/149‑1 (MQ=255)                                                     aaTCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGca                                                                                          >  5:390225/1‑149 (MQ=255)                                                       tCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGcaca                                                                                        <  6:348805/149‑1 (MQ=255)                                                       tCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGcaca                                                                                        >  7:97393/1‑149 (MQ=255)                                                           cAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGc                                                                                    >  1:298180/1‑149 (MQ=255)                                                             gCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTg                                                                                  <  7:233639/149‑1 (MQ=255)                                                               aaGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCTGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTg‑g                                                                                <  1:139033/148‑1 (MQ=255)                                                                 gCCCAAGCGGAGCGCCGGTGTCCCTGCCAAGGGGACCGGCACCCGGCGTCCAACCGGGCGGCTCAGCAGCGTGGCCAGGTTCTGCAGGCCAATGGTTACACCGGCGAGCACTGCGCCAAAGCCGAGCTGGTCGGGCACATAGCTg‑gg                                                                               <  8:40013/147‑1 (MQ=255)                                                                 gCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑Ggca                                                                             <  8:133699/149‑1 (MQ=255)                                                                  ccAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCTATCACTGCGCCAAAGCCCAGCTGCTCGTGAACAAAGCTG‑Ggcag                                                                            >  2:83157/1‑149 (MQ=255)                                                                  ccAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑Ggcag                                                                            >  2:143044/1‑149 (MQ=255)                                                                   cAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑Ggcagc                                                                           <  2:298180/149‑1 (MQ=255)                                                                   cAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑Ggcag                                                                            >  4:188536/1‑148 (MQ=255)                                                                       gCGGATGGCCTGTTTCCCTCGCAAGGTGTCCGCCACCCTGGCTGCAAACGGGGGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑GGCAGCACCg                                                                       <  6:164466/149‑1 (MQ=255)                                                                       gCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑GGCAGCACCg                                                                       <  2:262153/149‑1 (MQ=255)                                                                          gATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑GGCAGCACCGCaa                                                                    >  2:288731/1‑149 (MQ=255)                                                                                cTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑GGCAGCACCGCAATCGGCa                                                              <  1:288731/149‑1 (MQ=255)                                                                                   tttCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑GGCAGCACCGCAATCGGCAg                                                             <  5:277143/147‑1 (MQ=255)                                                                                    ttCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑GGCAGCACCGCAATCGGCAGGcc                                                          >  2:119610/1‑149 (MQ=255)                                                                                      ccctcccAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑GGCAGCACCGCAATc                                                                  >  1:173155/1‑139 (MQ=255)                                                                                      ccctcccAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑GGCAGCACCGCAATc                                                                  <  2:173155/139‑1 (MQ=255)                                                                                      ccctcccAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑GGCAGCACCGCAATCGGCAGGCCGa                                                        >  7:294546/1‑149 (MQ=255)                                                                                       cctcccAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑GGCAGCACCGCAATCGGCAGGCCGAt                                                       >  2:129207/1‑149 (MQ=255)                                                                                        ctcccAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑GGCAGCACCGCAATCGGCAGGCCGATg                                                      <  3:188536/149‑1 (MQ=255)                                                                                           ccAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑GGCAGCACCGCAATCGGCAGGCCGATGc                                                     <  7:228666/147‑1 (MQ=255)                                                                                           ccAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑GGCAGCACCGCAATCGGCAGGCCGATGCa                                                    <  1:129207/148‑1 (MQ=255)                                                                                             aaGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACGCCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑GGCAGCACCGCAATCGGCAGGCCGATGCagag                                                 <  3:122281/149‑1 (MQ=255)                                                                                                   tCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTGCGGCAGCACCGCAATCGGCAGGCCGATGCAGAGGAAgg                                            <  1:69478/149‑1 (MQ=255)                                                                                                          cccTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑GGCAGCACCGCAATCGGCAGGCCGATGCAGAGGAAGGCAATGAAg                                    <  2:381829/149‑1 (MQ=255)                                                                                                           cctgcctgCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACtgcaggcagggtggcggacaccttgggagggaaacaggccatccgctttggcttgctggggattgccggttgcggggtgttgacgttgctgtccgcctggaccctcacc                                    <  2:385406‑M2/149‑110 (MQ=255)                                                                                                             tgcctgcAAACGGGCGGCTCAGCTGCGTGGCCAGGTTCtgcaggctgggtggcggacagcttgggagggaaactggccttccgctttgggttgctggggattgccggttgcggggtgttgacgtggctgtcagcctggac                                           >  1:358735‑M2/1‑38 (MQ=255)                                                                                                             tgcctgcAAACGGGCGGCTCAGCAGCGTGGCCAGGTACtgcaggcagggttgcgtacaccttgggagggaaacaggccatccgctttggcttcctcggcattgccgcttgcggcgtgttgacgttgctgtcagcctcgac                                           <  2:358735‑M2/140‑103 (MQ=255)                                                                                                             tgcctgcAAACGGGCGGCTCAGCAGCGTGGCCAGGTACtgcaggcagggtggcggacaccttgggagggaaacaggccatccgctttggcttgctggggattgccggttgcggggtgttgacgttgctgtcagcctggaccctcacct                                   <  3:337033‑M2/148‑111 (MQ=255)                                                                                                             tgcctgcAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑GGCAGCACCGCAATCGGCAGGCCGATGCAGAGGAAGGCAATGAAGGta                                 >  7:61221/1‑149 (MQ=255)                                                                                                               cctgcAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑GGCAGCACCGCAATCGGCAGGCCGATGCAGAGGAAGGCAATGAAGGtata                               <  7:102366/149‑1 (MQ=255)                                                                                                               cctgcAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑GGCAGCACCGCAATCGGCAGGCCGATGCAGAGGAAGGCAATGAAGGtat                                <  1:119610/148‑1 (MQ=255)                                                                                                                 tgcAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑GGCAGCACCGCAATCGGCAGGCCGATGCAGAgg                                                >  1:66269/1‑130 (MQ=255)                                                                                                                 tgcAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑GGCAGCACCGCAATCGGCAGGCCGATGCAGAgg                                                <  2:66269/130‑1 (MQ=255)                                                                                                                   cAAACGGGCGGCTCAGCAGCGTTGCCAGGTACTGCAGGCCAATGGTTACACCGGCTATGACTGCGCCAAATCCGAGCTGGTCGTGCACATAGCTG‑GGCAGCAACGCAATCGGCAGGCCGATGCAGAGGAAGGCAATGAAGGTATAGa                             <  1:83157/147‑1 (MQ=255)                                                                                                                    aaaCGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑GGCAGCACCGCAATCGGCa                                                              >  6:224500/1‑113 (MQ=255)                                                                                                                    aaaCGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑GGCAGCACCGCAATCGGCAGGCCGATGCAGAGGAAGGCAATGAAGGTATAGaaaa                          >  7:223314/1‑149 (MQ=255)                                                                                                                            ggcTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑GGCAGCACCGCAATCGGCAGGCCGATGCAGAGGAAGGCAATGAAGGTATAGAAAACGATCGAc                  <  6:390225/149‑1 (MQ=255)                                                                                                                                  gcagcGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑GGCAGCACCGCAATCGGCAGGCCGATGCAGAGGAAGGCAATGAAGGTATAGAAAACGATCGACAGGATc            >  6:86954/1‑149 (MQ=255)                                                                                                                                          gCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACAAAGCTG‑GGCAGCACCGCAATCGGCAGGCCGATGCAGAGGAAGGCAATGAAGGTATAGAAAACGATCGACAGGATCTGCAggg     <  6:217669/148‑1 (MQ=255)                                                                                                                                            cAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑GGCAGCACCGCAATCGGCAGGCCGAt                                                       >  7:223540/1‑96 (MQ=255)                                                                                                                                            cAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑GGCAGCACCGCAATCGGCAGGCCGAt                                                       <  8:223540/96‑1 (MQ=255)                                                                                                                                            cAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑GGCAGCACCGCAATCGGCAGGCCGATGCAGAGGAAGGCAATGAAGGTATAGAAAACGATCGACAGGATCTGCAGGGTGa  >  8:194337/1‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                GCGGTAAGGTGAGGGTCCAGGCTGACAGCAACGTCAACACCCCGCAACCGGCAATCCCCAGCAAGCCAAAGCGGATGGCCTGTTTCCCTCCCAAGGTGTCCGCCACCCTGCCTGCAAACGGGCGGCTCAGCAGCGTGGCCAGGTACTGCAGGCCAATGGTTACACCGGCGATCACTGCGCCAAAGCCGAGCTGGTCGTGCACATAGCTG‑GGCAGCACCGCAATCGGCAGGCCGATGCAGAGGAAGGCAATGAAGGTATAGAAAACGATCGACAGGATCTGCAGGGTGA  >  NC_002947/3338668‑3338955

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.