| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3462287 | 53 (0.850) | 3 (0.050) | 3/244 | NT | 5.3% | coding (146/1059 nt) | PP_3077 | ABC transporter permease |
| ? | NC_002947 | = 3462335 | 59 (1.040) | coding (98/1059 nt) | PP_3077 | ABC transporter permease | |||||
CAAAGTCCAGCCGGGCATATTGGCCGAGCATCAACCAAAGCCGCTCGGGGGCGGATTTGTCGAAGCCATACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3462129‑3462287‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgccgggtgGCCCGGTGGAACAAGCCGTGGCGCGCCTGCAGGGCCTCGGTGGCGGCGCACCCGGCGCGCGAGCCGAAGTGGTCCATGGCGAATCCCGGGCCACACGCGGCCTGGACCCGAAACTGATCGAAGAAATCAAGCGCCAGTATGGCTTCG < NC_002947/3462335‑3462189 CAAAGTCCAGCCGGGCATATTGGCCGAGCATCAACCAAAGCCGCTCGGGGGCGGATTTGTCGAAGCCATACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGC > 3:130036/1‑149CAAAGTCCAGCCGGGCATATTGGCCGAGCATCAACCAAAGCCGCTCGGGGGCGGATTTGTCGAAGCCATACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGC < 7:112673/149‑1 GCCGGGCATATTGGCCGAGCATCAACCAAAGCCGCTCGGGGGCGGATTTGTCGAAGCCATACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGT > 6:10173/1‑149 GGCGGATTTGTCGAAGCCATACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGGCCCGGGGGAACACGCCGTGGCGCGCCTGCAGGGCCGCG > 2:163307/1‑149 GCCATACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGGCCCGGTGGAACAAGCCGTGGCGCGCCTGCAGGGCCTCGGTGGCGGCGCACCCG < 4:175326/149‑1 CTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGGCCCGGTGGAACAAGCCGTGGCGCGCCTGCAGGGCCTCGGTGGCGGCGCACCCGGCGCGC < 1:163307/149‑1 CTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGagcc > 7:245784/1‑83 CGCCGGGTGGCCCGGGGGACCACGCCGTGGCGCGCCTGCCGGGCCTGGGGGGGGGCGCACCCGGCGCGCACGCCGAAGGGGTCAATGGCGAATCCCGGCCCACACGCGGCCTGTACCCGAAACTGATCGAAGAAATCAAGCGCCAGTAT < 6:222812/149‑1 TGGCCCGGTGGAACAAGCCGTGGCGCGCCTGCAGGGCCTCGGTGGCGGCGCACCCGGCGCGCGAGCCGAAGTGGTCCATGGCGAATCCCGGGCCACACGCGGCCTGGACCCGAAACTGATCGAAGAAATCAAGCGCCAGTATGGCTTCG < 3:131516/149‑1 CAAAGTCCAGCCGGGCATATTGGCCGAGCATCAACCAAAGCCGCTCGGGGGCGGATTTGTCGAAGCCATACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3462129‑3462287‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgccgggtgGCCCGGTGGAACAAGCCGTGGCGCGCCTGCAGGGCCTCGGTGGCGGCGCACCCGGCGCGCGAGCCGAAGTGGTCCATGGCGAATCCCGGGCCACACGCGGCCTGGACCCGAAACTGATCGAAGAAATCAAGCGCCAGTATGGCTTCG < NC_002947/3462335‑3462189 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |