New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 346228753 (0.850)3 (0.050) 3/244 NT 5.3% coding (146/1059 nt) PP_3077 ABC transporter permease
?NC_002947 = 3462335 59 (1.040)coding (98/1059 nt) PP_3077 ABC transporter permease

CCGAGCATCAACCAAAGCCGCTCGGGGGCGGATTTGTCGAAGCCATACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATGGCGAAATTGACCAGCAGGATTGCCAGCAGCGTCGGGATGATCAGCAACAGACGGCGCAGGATATAAGCGGTCATGG  >  NC_002947/3462152‑3462434
                                                                                                                                       |                                                                                                                                                   
ccGAGCATCAACCAAAGCCGCTCGGGGGCGGATTTGTCGAAGCCATACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTgcgc                                                                                                                                                  >  8:52497/1‑139 (MQ=255)
ccGAGCATCAACCAAAGCCGCTCGGGGGCGGATTTGTCGAAGCCATACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTgcgc                                                                                                                                                  <  7:52497/139‑1 (MQ=255)
     cATCAACCAAAGCCGCTCGGGGGCGGATTTGTCGAAGCCATACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCt                                                                                                                                   <  3:342406/149‑1 (MQ=255)
     cATCAACCAAAGCCGCTCGGGGGCGGATTTGTCGAAGCCACACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCCGGTGCGCCGCCCCCGAGGCCCt                                                                                                                                   >  3:303976/1‑149 (MQ=255)
      aTCAACCAAAGCCGCTCGGGGGTGGATTTGTCGAAGCCATACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTg                                                                                                                                  >  7:332083/1‑149 (MQ=255)
      aTCAACCAAAGCCGCTCGGGGGCGGATTTGTCGAAGCCATACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTg                                                                                                                                  >  7:190674/1‑149 (MQ=255)
       tCAACCAAAGCCGCTCGGGGGCGGATTTGTCGAAGCCATACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGc                                                                                                                                 <  5:10173/149‑1 (MQ=255)
         aaCCAAAGCCGCTCGGGGGCGGATTTGTCGAAGCCATACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGTCGGGTGCGCCGCCACCGAGGCCCTGCAg                                                                                                                               >  7:333791/1‑149 (MQ=255)
         aaCCAAAGCCGCTCGGGGGCGGATTTGTCGAAGCCATACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCGGCAg                                                                                                                               >  2:304302/1‑149 (MQ=255)
          aCCAAAGCCGCTCGGGGGCGGATTTGTCGAAGCCATACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAgg                                                                                                                              >  4:264013/1‑149 (MQ=255)
            cAAAGCCGCTCGGGGGCGGATTTGTCGAAGCCATACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGgcg                                                                                                                            <  5:140635/149‑1 (MQ=255)
             aaaGCCGCTCGGGGGCGGATTTGTCGAAGCCATACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGgcgc                                                                                                                           <  7:215937/149‑1 (MQ=255)
               aGCCGCTCGGGGGCGGATTTGTCGAAGCCATACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGgcgcgc                                                                                                                         <  3:264013/149‑1 (MQ=255)
                  cGCTCGGGGGCGGATTTGTCGAAGCCATACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCAc                                                                                                                      >  8:345387/1‑149 (MQ=255)
                   gCTCGGGGGCGGATTTGTCGAAGCCATACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCACCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAg                                                                                                                               <  8:333001/139‑1 (MQ=255)
                   gCTCGGGGGCGGATTTGTCGAAGCCATACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCACCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAg                                                                                                                               >  7:333001/1‑139 (MQ=255)
                       gggggTGGATTTGTCGAAGCCATACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCtt                                                                                                                 <  8:332083/149‑1 (MQ=255)
                         gggCGGATTTGTCGAAGCCATACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGt                                                                                                               <  8:190674/149‑1 (MQ=255)
                          ggCGGATTTGTCGAAGCCATACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGgcccgggggaacacgccgtggcgcgcctgcagggccgcg                                                                                                              >  2:163307‑M1/1‑110 (MQ=255)
                          ggCGGATTTGTCGAAGCCATACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGt                                                                                                               >  8:220557/1‑148 (MQ=255)
                                     cGAAGCCATACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCca                                                                                                   <  3:131516‑M2/149‑3 (MQ=255)
                                         gCCATACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGgcccggtggaacaagccgtggcgcgcctgcagggcctcggtggcggcgcacccg                                                                                               <  4:175326‑M1/149‑55 (MQ=255)
                                            aTACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTACAGGCCGCGTGTGGGCCGGGATTCGCCATTGACCCCTTCGGCGTGCGCGCCGGGTGCGCCCCCCCCCAGGCCCGGCAGGCGCGCCACGGCGTGGTCCCCCGGGCcacccggcg                                                                                            <  6:222812‑M2/149‑10 (MQ=255)
                                               cTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGgcccggtggaacaagccgtggcgcgcctgcagggcctcggtggcggcgcacccggcgcgc                                                                                         <  1:163307‑M1/149‑61 (MQ=255)
                                                tGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCTCCATGGACCACTTCGGCTCGCGCGTCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGc                                                                                        <  8:333791/149‑1 (MQ=255)
                                                     cTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGcgcc                                                                                                                                                 <  8:245784/87‑1 (MQ=255)
                                                     cTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGagcc                                                                                                                                                 >  7:245784‑M1/1‑83 (MQ=255)
                                                      ttGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGAc                                                                                  >  6:315116/1‑149 (MQ=255)
                                                       tGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCAGGAc                                                                                  >  7:195834/1‑148 (MQ=255)
                                                            tcttcGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATgg                                                                             <  1:304302/148‑1 (MQ=255)
                                                             cttcGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATGGc                                                                            >  2:68087/1‑148 (MQ=255)
                                                              ttcGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATgg                                                                             <  6:380158/146‑1 (MQ=255)
                                                              ttcGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATgg                                                                             >  5:380158/1‑146 (MQ=255)
                                                                cggtCAGTTTCGGGTCCAGGCCGGGTGTGGCCCGGGATTCGGCATGGGGCACGTCGGCGCGCGCGCCGGGGGCGCCGCCCGCGCGGCCCGGCCGGCGCGCGCCGGCTTGTTCCCCCGGGCCGCCCGGCGCGGCCGGGGCGCGGGCGaaa                                                                        >  6:218315/4‑149 (MQ=255)
                                                                 gATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCGATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGCGGCCCTGCAGGCGCGCCACGGCTTGTTCCCCCGGGCCACCCGGCGCGGCCTGGACGATGGCGaaa                                                                        <  3:366710/148‑1 (MQ=255)
                                                                  aTCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATGGCGAAAtt                                                                      >  5:221962/1‑149 (MQ=255)
                                                                   tCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATGGCGAAATTg                                                                     <  5:218315/149‑1 (MQ=255)
                                                                       tttCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATGGCGAAATTGACca                                                                 <  7:345387/149‑1 (MQ=255)
                                                                             gTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATGGCGAAATTGAcagattcg                                                            >  1:250495/1‑141 (MQ=255)
                                                                             ctCCAGGCCGCGTGGGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATGGCGAAATTGa                                                                    <  2:250495/139‑1 (MQ=255)
                                                                                 aGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATGGCGAAATTGACCAGCAGGATTGc                                                       >  8:352127/1‑149 (MQ=255)
                                                                                          gtgGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATGGCGAAATTGACCAGCAGGATTGCCAGCAGCGt                                              >  5:132923/1‑149 (MQ=255)
                                                                                           tgGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATGGCGAAATTGACCAGCAGGATTGCCAGCAGCGTc                                             <  5:345590/149‑1 (MQ=255)
                                                                                             gCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATGGCGAAATTGACcagc                                                               <  1:346872/129‑1 (MQ=255)
                                                                                             gCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATGGCGAAATTGACcagc                                                               >  2:346872/1‑129 (MQ=255)
                                                                                             gCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATGGCGAAATTGACCAGCAGGATTGCCAGCAGCGTCgg                                           >  3:264541/1‑149 (MQ=255)
                                                                                              cccGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTgcgc                                                                                                                                                  >  4:171215/1‑45 (MQ=255)
                                                                                              cccGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTgcgc                                                                                                                                                  <  3:171215/45‑1 (MQ=255)
                                                                                              cccGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATGGCGAAATTGACCAGCAGGATTGTCAGCAGCGTCggg                                          <  4:131516/149‑1 (MQ=255)
                                                                                               ccGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATGGCGAAATTGACCAGCAGGATTGCCAGCAGCGTCGGga                                         >  7:333026/1‑149 (MQ=255)
                                                                                                  ggATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATGGCGAAATTGACCAGCAGGATTGCCAGCAGCGTCGGgatga                                      <  8:333026/149‑1 (MQ=255)
                                                                                                     ttCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATGGCGAAATTGACCAGCAGGATTGCCAGCAGCGTCGGGATGATCa                                   <  7:220557/149‑1 (MQ=255)
                                                                                                        gCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATGGCGAAATTGACCAGCAGGATTGCCAGCAGCGTCGGGATGATCAGc                                 >  5:215243/1‑148 (MQ=255)
                                                                                                         ccATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATg                                                                              >  4:180400/1‑102 (MQ=255)
                                                                                                         ccATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATg                                                                              <  3:180400/102‑1 (MQ=255)
                                                                                                         ccATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATGGCGAAATTGACCAGCAGGATTGCCAGCAGCGTCGGGATGATCAGCaa                               <  5:315116/149‑1 (MQ=255)
                                                                                                           aTGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATGGCGAAATTGACCAGCAGGATTGCCagcagc                                                <  2:306700/130‑1 (MQ=255)
                                                                                                           aTGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACAGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATGGCGAAATTGACCAGCAGGATTGCCagcagc                                                >  1:306700/1‑130 (MQ=255)
                                                                                                               aCCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATGGCGAAATTGACCAGCAGGATTGCCAGCAGCGTCGGGATGATCAGCAACAGACg                         >  6:289131/1‑149 (MQ=255)
                                                                                                               aCCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATGGCGAAATTGACCAGCAGGATTGCCAGCAGCGTCGGGATGATCAGCAACAGACg                         >  2:191525/1‑149 (MQ=255)
                                                                                                                   cTTCGGCTCGGGCGCCGGGTGCGCCGCCAGCGAGGCCGTGCTGGCGCGCCTCGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATGGCGAAATTGACCAGCAGGATTGCGAGCAGCGTCGGGATGATCAGCAACAGACGgcgc                     <  8:195834/149‑1 (MQ=255)
                                                                                                                   cTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATGGCGAAATTGACCAGCAGGATTGCCAGCAGCGTCGGGATGATCAGCAACAGACGgcg                      >  5:209201/1‑148 (MQ=255)
                                                                                                                    ttCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATGGCGAAATTGACCAGCAGGATTGCCAGCAGCGTCGGGATGATCAGCAACAGACGgcg                      >  1:327756/1‑147 (MQ=255)
                                                                                                                            gcgcgcCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCcacccggcgcgcgagccgaagtggtccatggcgaatcccgggccacacgcggcctggacccgaaactgatcgaagaaatcaagcgccag            <  1:163307‑M2/149‑90 (MQ=255)
                                                                                                                               cgcCGGGTGgcccgggggaccacgccgtggcgcgcctgccgggcctgggggggggcgcacccggcgcgcacgccgaaggggtcaatggcgaatcccggcccacacgcggcctgtacccgaaactgatcgaagaaatcaagcgccagtat         <  6:222812‑M1/149‑141 (MQ=255)
                                                                                                                                  cGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCcacccggcgcgcgagccgaagtggtccatggcgaatcccgggccacacgcggcctggacccgaaactgatcgaagaaatcaagcgccagtatggc      <  4:175326‑M2/149‑96 (MQ=255)
                                                                                                                                  cGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATGGCGAAATTGACCAGCAGGATTGCCAGCAGCGTCGGGATGATCAGCAACAGACGGCGCAGGATATAAGCGGTc      <  5:222812/149‑1 (MQ=255)
                                                                                                                                    ggTGCGACGCCACCGAGGCCCTGCAGGCGCGCAACGGCTTGTTACACCGGGCCACCCGGCGCGGCCTGGACCATGGCGAAATTGACCACCAGGATTGCCAGAAGCGTAGGCATGATCAGCAACAGACGGCGCAGGATATAAGCGGACAt    >  2:27268/1‑149 (MQ=255)
                                                                                                                                      tGgcccggtggaacaagccgtggcgcgcctgcagggcctcggtggcggcgcacccggcgcgcgagccgaagtggtccatggcgaatcccgggccacacgcggcctggacccgaaactgatcgaagaaatcaagcgccagtatggcttcg  <  3:131516‑M1/149‑148 (MQ=255)
                                                                                                                                       |                                                                                                                                                   
CCGAGCATCAACCAAAGCCGCTCGGGGGCGGATTTGTCGAAGCCATACTGGCGCTTGATTTCTTCGATCAGTTTCGGGTCCAGGCCGCGTGTGGCCCGGGATTCGCCATGGACCACTTCGGCTCGCGCGCCGGGTGCGCCGCCACCGAGGCCCTGCAGGCGCGCCACGGCTTGTTCCACCGGGCCACCCGGCGCGGCCTGGACGATGGCGAAATTGACCAGCAGGATTGCCAGCAGCGTCGGGATGATCAGCAACAGACGGCGCAGGATATAAGCGGTCATGG  >  NC_002947/3462152‑3462434

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.