| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3569079 = | 58 (0.940) | 3 (0.050) | 3/252 | NT | 5.7% | coding (1636/1998 nt) | PP_3150 | hypothetical protein |
| ? | NC_002947 | 3569115 = | 45 (0.770) | coding (1672/1998 nt) | PP_3150 | hypothetical protein | |||||
AGCTTCGGCGCCTTGTCCCAGCGGTAACGGCTCTTGGCTTTGGCAAAGTGCTCCGGCGTGTAGCCTTTGCGCAGCATGTTGGCCACGGCGACGAACGCTTTGTCATCGCCCTTGTCCTGTTCCAGCGCCTGCCAGCTGGCATAGCGGAACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3569230‑3569079‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaacagGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCTGTTCCTGGGGCGAGTACGGGATGTGAAGAACA > NC_002947/3569115‑3569262 AGCTTCGGCGCCTTGTCCCAGCGGTAACGGCTCTTGGCTTTGGCAAAGTGCTCCGGCGTGTAGCCTTTGCGCAGCATGTTGGCCACGGCGACGAACGCTTTGTCATCGCCCTTGTCCTGTTCCAGCGCCTGCCAGCTGGCATAGCGGAA > 4:236932/1‑149 CTTCGGAGCCTTTTCCCAGCGGTAACGGCTCTTGGCTTTGGCAAAGTGCTCCGGCGTGTACCCTTTGCGCATCATGTTGGCCACGGCGACGAACGCTTTGTCATCGCCCTTGTCCTGTTCCAGCGCCTGCCAGCTGGCATAGCGGAACA < 6:109322/149‑1 CCTTGTCCTGTTCCAGCGCCTGCCAGCTGGCATAGCGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGG > 6:257266/1‑149 TGTTCCAGCGCCTGCCAGCTGGCATAGCGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACA < 5:349414/75‑1 TGTTCCAGCGCCTGCCAGCTGGCATAGCGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACA > 6:349414/1‑75 GAACAGTACAAGGGCTATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCTGAGCACTTTGCCAAAGCCAATAGCCGTTACCGCTTGGACAAGGCGCCGAAGCTGTTCCTGGGTCTAGTACGGGATGTGA < 8:320178/148‑1 GAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCTGTTCCTGGGGCGAGTACGGGATGTG > 4:255848/1‑147 CAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCTGTTCCTTGGGCGAGTACGGGATGTGAAGAA < 7:59795/149‑1 AGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCTGTTCCTGGGGCGAGTACGGGATGTGAAGAA > 4:111726/1‑148 GGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGTCAAAGCGCCGAAGCTGTTCCTGGGGCGAGTACCGGATGTGCAG > 4:118049/1‑145 GGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCTGTTCCTGGGGCGAGTACGGGATGTGAAGAACA > 4:344189/1‑149 AGCTTCGGCGCCTTGTCCCAGCGGTAACGGCTCTTGGCTTTGGCAAAGTGCTCCGGCGTGTAGCCTTTGCGCAGCATGTTGGCCACGGCGACGAACGCTTTGTCATCGCCCTTGTCCTGTTCCAGCGCCTGCCAGCTGGCATAGCGGAACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3569230‑3569079‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaacagGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCTGTTCCTGGGGCGAGTACGGGATGTGAAGAACA > NC_002947/3569115‑3569262 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |