New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3569079 = | 58 (0.940) | 3 (0.050) | 3/252 | NT | 5.7% | coding (1636/1998 nt) | PP_3150 | hypothetical protein |
? | NC_002947 | 3569115 = | 45 (0.770) | coding (1672/1998 nt) | PP_3150 | hypothetical protein |
GGGGGTGCCGTTCTTGTTGCTGAAAAGCGCTCGCAAGGACTTTGAACTGTTCGTCGAGGACTGCATCGAGCTGTACCGCTACGGCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCTGTTCCTGGGGCGAGTACGGGATGTGAAGAACAT > NC_002947/3568973‑3569263 | ccttgtcccagcggtaacggctcttggctttggcaaagtgctccggcgtgtagcctttgcgcagcatgttggccacggcgacgaacgctttgtcatcgcccttgtcCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAgg > 6:257266‑M1/107‑149 (MQ=255) tGCCGTTCTTGTTGCTGAAAAGCGCTCGCAAGGACTTTGAACTGTTCGTCGAGGACTGCATCGAGCTGTACCGCTACGGCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGAt < 2:23559/149‑1 (MQ=255) tGCCGTTCTTGTTGCTGAAAAGCGCTCGCAAGGACTTTGAACTGTTCGTCGAGCACTGCATAGAGCTGTACCGCTACGGCACCCGGCCTCCCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGAt > 3:337539/1‑149 (MQ=255) cGTTCTTGTTGCTGAAAAGCGCTCGCAAGGACTTTGAACTGTTCGTCGAGGACTGCATCGAGCTGTACCGCTACGGCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGa > 8:10365/1‑148 (MQ=255) cGTTCTTGTTGCTGAAAAGCGCTCGCAAGGACTTAGAACTGTTCGTCGAGGACTGCATCGAGCTGTACCGCTACGGCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGa > 1:253981/1‑148 (MQ=255) tgCTGAAAAGCGCTCGCAAGGACTTTGAACTGTTCGTCGAGGACTGCATCGAGCTGTACCGCTACGGCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTtc > 3:236932/1‑149 (MQ=255) cTGAAAAGCGCTCGCAAGGACTTTGAACTGTTCGTGGAGGACTGCATCGAGCTGTAACGCTACGGCAAACTTCCGCGCCACCCGATGCTGTTACGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACTAAGCGTtcgt > 7:320178/1‑149 (MQ=255) tGAAAAGCGCTCGCAAGGACTTTGAACTGTTCGTCGAGGACTGCATCGAGCTGTACCGCTACGGCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTtcgtc > 1:158606/1‑149 (MQ=255) aaaGCGCTCGCAAGGACTTTGAACTGTTCGTCGAGGACTGCATCGAGCTGTACCGCTACGGCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGcc < 2:23101/149‑1 (MQ=255) tCGCAAGGACTTTGAACTGTTCGTCGAGGACTGCATCGAGCTGTACCGCTACGGCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGcc > 8:54259/1‑148 (MQ=255) tCGCAAGGACTTTGAACTGTTCGTCGAGGACTGCATCGAGCTGTACCGCTACGGCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGcc > 8:268571/1‑148 (MQ=255) gCAAGGACTTTGAACTGTTCGTCGAGGACTGCATCGAGCTGTACCGCTACGGCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCaa < 1:199790/148‑1 (MQ=255) aaGGACTTTGAACTGTTCGTCGAGGACTGCATCGAGCTGTACCGCTACGGCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACAt > 7:75339/1‑149 (MQ=255) gACTTTGAACTGTTCGTCGAGGACTGCATCGAGCTGTACCGCTACGGCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAg < 4:346211/124‑1 (MQ=255) cTTTGAACTGTTCGTCGAGGACTGCATCGAGCTGTACCGCTACGGCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACAtgctgc > 5:281375/1‑149 (MQ=255) cTGTTCGTCGAGGACTGCATCGAGCTGTACCGCTACGGCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAgg < 8:325863/149‑1 (MQ=255) cTGTTCGTCGAGGACTGCATCGAGCTGTACCGCTACGGCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAgg < 2:158606/149‑1 (MQ=255) cTGTTCGTCGAGGACTGCATCGAGCTGTACCGCTACGGCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAgg < 4:293881/149‑1 (MQ=255) gtcgAGGACTGCATCGAGCTGTACCGCTACGGCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTacac > 4:5617/1‑149 (MQ=255) gAGGACTGCATCGAGCTGTACCGCTACGGCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGcc < 8:41012/149‑1 (MQ=255) aGGACTGCCGCGAGCTGTACCGCTACGGCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCg < 8:153862/149‑1 (MQ=255) gACTGCATCGAGCTGTACCGCTACGGCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGa < 8:75339/149‑1 (MQ=255) cTGCATCGAGCTGTACCGCTACGGCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAg > 1:129721/1‑148 (MQ=255) gCATCGAGCTGTACCGCTACGGCACCCGGCCGCGCCAACCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTCCACGCCGGAGCAc > 6:820/1‑149 (MQ=255) aTCGAGCTGTACCGCTACGGCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACtt > 4:195035/1‑149 (MQ=255) gAGCTGTACCGCTACGGCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGc < 2:129721/149‑1 (MQ=255) tACCGCTACGGCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCaaa < 7:268571/147‑1 (MQ=255) cGCTACGGCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGcc > 3:66378/1‑128 (MQ=255) cGCTACGGCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGcc < 4:66378/128‑1 (MQ=255) cGGCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGcc < 6:281375/149‑1 (MQ=255) ggCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCg < 3:195035/149‑1 (MQ=255) gCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGt > 5:36353/1‑149 (MQ=255) gCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGt > 3:161569/1‑149 (MQ=255) gCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGt < 6:143405/149‑1 (MQ=255) ccGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGc < 6:377102/135‑1 (MQ=255) ccGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGc > 5:377102/1‑135 (MQ=255) aCCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAg > 5:58669/1‑149 (MQ=255) ccttgtcctgttccagcgcctgccagctggcatagcggaacagGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAgg > 6:257266‑M2/44‑149 (MQ=255) ccGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGgc < 2:253981/149‑1 (MQ=255) gATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGgcgc > 1:213582/1‑149 (MQ=255) tgttccagcgcctgccagctggcatagcggaacagGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACa > 6:349414‑M2/36‑75 (MQ=255) tgttccagcgcctgccagctggcatagcggaacagGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACa < 5:349414‑M2/40‑1 (MQ=255) TGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGATGCGCAAAGGGTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGAAAAGGCTCCGAAg < 6:109322‑M1/149‑1 (MQ=255) TTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCt > 4:236932‑M1/1‑149 (MQ=255) tGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCTGTTCCTgg < 7:10365/149‑1 (MQ=255) ccAGCTGGCAGGCGCTGGAACAGGACAAGGCCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTCCGCAAAGGCTACACGCCGGAGCACTTTGCCAACGCCAAGAGCCCTTACCGCTCGGACAAGGCGCCGAAGCAGTTCCTgggg > 6:36422/1‑149 (MQ=255) cAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAg > 3:181318/1‑136 (MQ=255) cAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAg < 4:181318/136‑1 (MQ=255) cAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCTGTTCCTGGGGc < 6:36353/149‑1 (MQ=255) gCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCTGTTCCTGGGGCGa < 2:213582/149‑1 (MQ=255) ggCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCTGTTCCTGGGGCGAgac > 2:235452/1‑147 (MQ=255) tgcgcTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCTGTTCCTGGGGCGAGTACggg < 7:54259/148‑1 (MQ=255) gcgcTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCTGTTCCTGGGGCGAGTACGGGa < 5:820/149‑1 (MQ=255) gcgcTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCTGTTCCTGGGGCGAGTACGGGa < 6:58669/149‑1 (MQ=255) gaacagTACAAGGGCTATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCTGAGCACTTTGCCAAAGCCAATAGCCGTTACCGCTTGGACAAGGCGCCGAAGCTGTTCCTGGGTCTAGTACGGGATGTga < 8:320178‑M2/142‑1 (MQ=255) gaacagGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCTGTTCCTGGGGCGAGTACGGGAtgtg > 4:255848‑M2/7‑147 (MQ=255) cagGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCTGTTCCTTGGGCGAGTACGGGATGTgaagaa < 7:59795‑M2/146‑1 (MQ=255) agGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCTGTTCCTGGGGCGAGTACGGGATGTgaagaa > 4:111726‑M2/3‑148 (MQ=255) gGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGTCAAAGCGCCGAAGCTGTTCCTGGGGCGAGTACCGGATGTgcag > 4:118049‑M2/2‑145 (MQ=255) gGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCTGTTCCTGGGGCGAGTACGGGATGTGAAGAACa > 4:344189‑M2/2‑149 (MQ=255) gACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCTGTTCCTGGGGCGAGTACGGGATGTGAAGAACAt > 3:299944/1‑149 (MQ=255) | GGGGGTGCCGTTCTTGTTGCTGAAAAGCGCTCGCAAGGACTTTGAACTGTTCGTCGAGGACTGCATCGAGCTGTACCGCTACGGCACCCGGCCGCGCCACCCGATGCTGTTCCGCTATGCCAGCTGGCAGGCGCTGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCTGTTCCTGGGGCGAGTACGGGATGTGAAGAACAT > NC_002947/3568973‑3569263 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |