New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3574117 | 58 (0.940) | 3 (0.050) | 3/252 | NT | 5.3% | coding (1228/2130 nt) | PP_3155 | ferric siderophore receptor |
? | NC_002947 | = 3574166 | 52 (0.890) | coding (1179/2130 nt) | PP_3155 | ferric siderophore receptor |
GGTCGCTTATCGTCGTAATCGTGCTCGAAGCGCTCGAAGCGTACACCAGCCAACGCCTTCAGACGCTCGGTCAGCGCCACCTGATCCTGGATGAAGAAGGCCCAGGTCTGCAGGTTCTCACTGTCCCAGGTCGTTGGGACCGCAGCCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3573966‑3574117 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcgcGTCCTACCCGATCGACATCTACGACCCGGTACTCGGCCAACCGAGACCGGCGCTGGCTGCGGTCCCAACGACCTGGGACAGTGAGAACCTGCAGACCTGGGCCTTCTTCATCCAGGATCAGGTGGCGCTGACCGAGCGTCTGAA < NC_002947/3574166‑3574023 GGTCGCTTATCGTCGTAATCGTGCTCGAAGCGCTCGAAGCGTACACCAGCCAACGCCTTCAGACGCTCGGGCAGCGCCACCTGATCCTGGAGGAAGAAGGCCCAGGTCTGCAGGTTCTCACTGTCCCAGGTCGTTGGGACCGCAGCCAG < 5:293398/149‑1 TTATCGTCGTAATCGTGCTCGAAGCGCTCGAAGCGTACACCAGCCAACGCCTTCAGACGCTCGGTCAGCGCCACCTGATCCTGGATGAAGAAGGCCCAGGTCTGCAGGTTCTCACTGTCCCAGGTCGTTGGGACCGCAGCCAGCG > 1:273339/1‑145 TTATCGTCGTAATCGTGCTCGAAGCGCTCGAAGCGTACACCAGCCAACGCCTTCAGACGCTCGGTCAGCGCCACCTGATCCTGGATGAAGAAGGCCCAGGTCTGCAGGTTCTCACTGTCCCAGGTCGTTGGGACCGCAGCCAGCG < 2:273339/145‑1 TACACCAGCCAACGCCTTCAGACGCTCGGTCAGCGCCACCTGATCCTGGATGAAGAAGGCCCAGGTCTGCAGGTTCTCACTGTCCCAGGTCGTTGGGACCGCAGCCAGCGCGTCCTACCCGATCGACATCTACGACCCGGTACTCGGC > 1:93189/1‑148 GACGCTCGGTCAGCGCCACCTGATCCTGGATGAAGAAGGCCCAGGTCTGCAGGTTCTCACTGTCCCAGGTCGTTGGGACCGCAGCCAGCGCGTCCTACCCGATCGACATCTACGACCCGGTACTCGGCCAACCGAGACCGGCGCTGGCT < 2:93189/149‑1 GCTCGGTCAGCGCCACCTGATCCTGGATGAAGAAGGCCCAGGTCTGCAGGTTCTCACTGTCCCAGGTCGTTGGGACCGCAGCCAGCGCGTCCTACCCGATCGACATCTACGACCCGGTACTCGGCCAACCGAGACCGGCGCTGGCTGCG < 5:135650/149‑1 AGCGCGTCCTACCCGATCGACATCTACGACCCGGTACTCGGCCAACCGAGACCGGCGCTGGCTGCGGTCCCAACGACCTGGGACAGTGAGAACCTGCAGACCTGGGCCTTCTTCATCCAGGATCAGGTGGCGCTGACCGAGCGTCTGAA < 3:45836/149‑1 AGCGCGTCCTACCCGATCGACATCTACGACCCGGTACTCGGCCAACCGAGACCGGCGCTGGCTGCGGTCCCAACGACCTGGGACAGTGAGAACCTGCAGACCTGGGCCTTCTTCATCCAGGATCAGGTGGCGCTGACCGAGCGTCTG > 5:192703/1‑147 GGTCGCTTATCGTCGTAATCGTGCTCGAAGCGCTCGAAGCGTACACCAGCCAACGCCTTCAGACGCTCGGTCAGCGCCACCTGATCCTGGATGAAGAAGGCCCAGGTCTGCAGGTTCTCACTGTCCCAGGTCGTTGGGACCGCAGCCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3573966‑3574117 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcgcGTCCTACCCGATCGACATCTACGACCCGGTACTCGGCCAACCGAGACCGGCGCTGGCTGCGGTCCCAACGACCTGGGACAGTGAGAACCTGCAGACCTGGGCCTTCTTCATCCAGGATCAGGTGGCGCTGACCGAGCGTCTGAA < NC_002947/3574166‑3574023 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |