New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 357411758 (0.940)3 (0.050) 3/252 NT 5.3% coding (1228/2130 nt) PP_3155 ferric siderophore receptor
?NC_002947 = 3574166 52 (0.890)coding (1179/2130 nt) PP_3155 ferric siderophore receptor

GGTCGCTTATCGTCGTAATCGTGCTCGAAGCGCTCGAAGCGTACACCAGCCAACGCCTTCAGACGCTCGGTCAGCGCCACCTGATCCTGGATGAAGAAGGCCCAGGTCTGCAGGTTCTCACTGTCCCAGGTCGTTGGGACCGCAGCCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3573966‑3574117
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcgcGTCCTACCCGATCGACATCTACGACCCGGTACTCGGCCAACCGAGACCGGCGCTGGCTGCGGTCCCAACGACCTGGGACAGTGAGAACCTGCAGACCTGGGCCTTCTTCATCCAGGATCAGGTGGCGCTGACCGAGCGTCTGAA  <  NC_002947/3574166‑3574023
                                                                                                                                                                                                                                                                                                        
GGTCGCTTATCGTCGTAATCGTGCTCGAAGCGCTCGAAGCGTACACCAGCCAACGCCTTCAGACGCTCGGGCAGCGCCACCTGATCCTGGAGGAAGAAGGCCCAGGTCTGCAGGTTCTCACTGTCCCAGGTCGTTGGGACCGCAGCCAG                                                                                                                                                     <  5:293398/149‑1
      TTATCGTCGTAATCGTGCTCGAAGCGCTCGAAGCGTACACCAGCCAACGCCTTCAGACGCTCGGTCAGCGCCACCTGATCCTGGATGAAGAAGGCCCAGGTCTGCAGGTTCTCACTGTCCCAGGTCGTTGGGACCGCAGCCAGCG                                                                                                                                                   >  1:273339/1‑145
      TTATCGTCGTAATCGTGCTCGAAGCGCTCGAAGCGTACACCAGCCAACGCCTTCAGACGCTCGGTCAGCGCCACCTGATCCTGGATGAAGAAGGCCCAGGTCTGCAGGTTCTCACTGTCCCAGGTCGTTGGGACCGCAGCCAGCG                                                                                                                                                   <  2:273339/145‑1
                                         TACACCAGCCAACGCCTTCAGACGCTCGGTCAGCGCCACCTGATCCTGGATGAAGAAGGCCCAGGTCTGCAGGTTCTCACTGTCCCAGGTCGTTGGGACCGCAGCCAGCGCGTCCTACCCGATCGACATCTACGACCCGGTACTCGGC                                                                                                             >  1:93189/1‑148
                                                             GACGCTCGGTCAGCGCCACCTGATCCTGGATGAAGAAGGCCCAGGTCTGCAGGTTCTCACTGTCCCAGGTCGTTGGGACCGCAGCCAGCGCGTCCTACCCGATCGACATCTACGACCCGGTACTCGGCCAACCGAGACCGGCGCTGGCT                                                                                        <  2:93189/149‑1
                                                                GCTCGGTCAGCGCCACCTGATCCTGGATGAAGAAGGCCCAGGTCTGCAGGTTCTCACTGTCCCAGGTCGTTGGGACCGCAGCCAGCGCGTCCTACCCGATCGACATCTACGACCCGGTACTCGGCCAACCGAGACCGGCGCTGGCTGCG                                                                                     <  5:135650/149‑1
                                                                                                                                                   AGCGCGTCCTACCCGATCGACATCTACGACCCGGTACTCGGCCAACCGAGACCGGCGCTGGCTGCGGTCCCAACGACCTGGGACAGTGAGAACCTGCAGACCTGGGCCTTCTTCATCCAGGATCAGGTGGCGCTGACCGAGCGTCTGAA  <  3:45836/149‑1
                                                                                                                                                   AGCGCGTCCTACCCGATCGACATCTACGACCCGGTACTCGGCCAACCGAGACCGGCGCTGGCTGCGGTCCCAACGACCTGGGACAGTGAGAACCTGCAGACCTGGGCCTTCTTCATCCAGGATCAGGTGGCGCTGACCGAGCGTCTG    >  5:192703/1‑147
                                                                                                                                                                                                                                                                                                        
GGTCGCTTATCGTCGTAATCGTGCTCGAAGCGCTCGAAGCGTACACCAGCCAACGCCTTCAGACGCTCGGTCAGCGCCACCTGATCCTGGATGAAGAAGGCCCAGGTCTGCAGGTTCTCACTGTCCCAGGTCGTTGGGACCGCAGCCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3573966‑3574117
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcgcGTCCTACCCGATCGACATCTACGACCCGGTACTCGGCCAACCGAGACCGGCGCTGGCTGCGGTCCCAACGACCTGGGACAGTGAGAACCTGCAGACCTGGGCCTTCTTCATCCAGGATCAGGTGGCGCTGACCGAGCGTCTGAA  <  NC_002947/3574166‑3574023

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.