New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3600298	45 (0.730)	3 (0.050)	3/254	NT	6.4%	coding (895/1323 nt)	PP_3176	MFS transporter
	?	NC_002947	= 3600336	45 (0.760)					coding (857/1323 nt)	PP_3176	MFS transporter

ACAAGCCAAGAATGGCAATGGTCGGGTTGCCGGCGAAGTTCACCGCAATCAGCAGGCCGACGGCGCCCATCAGCATTGGCACCACCAGGTGCCAGCGGCGCTCGTTGCGCAGGTCGGCCGAGCGCCCGCAAAGGATCATGAATACACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3600148‑3600298 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgcTGCTGATCGGCTGGCTCAGCGCCATCCCGTACCTGCTGGCGGGTGTATTCATGATCCTTTGCGGGCGCTCGGCCGACCTGCGCAACGAGCGCCGCTGGCACCTGGTGGTGCCAATGCTGATGGGCGCCGTCGGCCTGCTGATTGCGGT  <  NC_002947/3600336‑3600189                                                                                                                                                                                                                                                                                                             ACAAGCCAAGAATGGCAATGGTCGGGTTGCCGGCGAAGTTCACCGCAATCAGCAGGCCGACGGCGCCCATCAGCATTGGCACCACCAGGTGCCAGCGGCGCTCGTTGCGCAGGTCGGCCGAGCGCCCGCAAAGGATCATGAATACACCC                                                                                                                                                        >  7:331716/1‑149     GCCAAGAATGGCAATGGTCGGGTTGCCGGCGAAGTTCACCGCAATCAGCAGGCCGACGGCGCCCGTCAGCATTGGCACCACCAGGTGCCAGCGGCGCTCGTTGCGCAGGTCGGCCGAGCGCCCGCAAAGGATCATGAATACACCC                                                                                                                                                        >  5:224185/1‑145     GCCAAGAATGGCAATGGTCGGGTTGCCGGCGAAGTTCACCGCAATCAGCAGGCCGACGGCGCCCGTCAGCATTGGCACCACCAGGTGCCAGCGGCGCTCGTTGCGCAGGTCGGCCGAGCGCCCGCAAAGGATCATGAATACACCC                                                                                                                                                        <  6:224185/145‑1                                               AATCAGCAGGCCGACGGCGCCCATCAGCATTGGCACCACCAGGTGCCAGCGGCGCTCGTTGCGCAGGTCGGCCGAGCGCCCGCAAAGGATCATGAATACACCCGCTGCTGATCGGCTGGCTCAGCGCCATCCCGTACCTGCTGGCGGGT                                                                                                          <  1:139373/149‑1                                                                           ATTGGCACCACCAGGTGCCAGCGGCGCTCGTTGCGCAGGTCGGCCGAGCGCCCGCAAAGGATCATGAATACACCCGCTGCTGATCGGCTGGCTCAGCGCCATCCCGTACCTGCTGGCGGGTGTAT                                                                                                      >  3:313037/1‑125                                                                           ATTGGCACCACCAGGTGCCAGCGGCGCTCGTTGCGCAGGTCGGCCGAGCGCCCGCAAAGGATCATGAATACACCCGCTGCTGATCGGCTGGCTCAGCGCCATCCCGTACCTGCTGGCGGGTGTAT                                                                                                      <  4:313037/125‑1                                                                                                                                                   CCCGCTGCTGATCGGCTGGCTCAGCGCCATCCCGTACCTGCTGGCGGGTGTATTCATGATCCTTTGCGGGCGCTCGGCCGACCTGCGCAACGAGCGCCGCTGGCACCTGGTGGTGCCAATGCTGATGGGCGCCGTCGGCCTGCTGATTG      <  8:99861/149‑1                                                                                                                                                    CCGCTGCTGATCGGCTGGCTCAGCGCCATCCCGTACCTGCTGGCGGGTGTATTCATGATCCTTTGCGGGCGCTCGGCCGACCTGCGCAACGAGCGCCGCTGGCACCTGGTGGTGCCAATGCTGATGGGCGCCGTCGGCCTGCTGATTGC     >  2:179952/1‑149                                                                                                                                                     CGCTGCTGATCGGCTGGCTCAGCGCCATCCCGTACCTGCTGGCGGGTGTATTCATGATCCTTTGCGGGCGCTCGGCCGACCTGCGCAACGAGCGCCGCTGGCACCTGGTGGTGCCAATGCTGATGGGCGCCGTCGGCCTGCTGATTGCG    <  1:179952/149‑1                                                                                                                                                       CTGCTGATCGGCTGGCTCAGCTCCATGCCGTACCTGCTGGCGGGTGTATTCATTATCCTTTGCGGGCGCTCGGCCGACCTGCGCAACTAGCGCCGCTGGCACCTGGTGGTGCCAATGCTGATGGGCGCCGTCGGCCTGCTGATTGCGGT  <  5:312333/149‑1                                                                                                                                                                                                                                                                                                             ACAAGCCAAGAATGGCAATGGTCGGGTTGCCGGCGAAGTTCACCGCAATCAGCAGGCCGACGGCGCCCATCAGCATTGGCACCACCAGGTGCCAGCGGCGCTCGTTGCGCAGGTCGGCCGAGCGCCCGCAAAGGATCATGAATACACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3600148‑3600298 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgcTGCTGATCGGCTGGCTCAGCGCCATCCCGTACCTGCTGGCGGGTGTATTCATGATCCTTTGCGGGCGCTCGGCCGACCTGCGCAACGAGCGCCGCTGGCACCTGGTGGTGCCAATGCTGATGGGCGCCGTCGGCCTGCTGATTGCGGT  <  NC_002947/3600336‑3600189

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.