New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4451327 | 58 (0.940) | 3 (0.050) | 3/248 | NT | 5.6% | coding (931/3564 nt) | nicB | nicotinate dehydrogenase subunit B |
? | NC_002947 | = 4451412 | 47 (0.810) | coding (1016/3564 nt) | nicB | nicotinate dehydrogenase subunit B |
TCCGCGACTTCGTCGGTGTGGTGGCAGAGCGCGAAGAGCAAGCCATCCGTGCAGCCCATGAGCTGAAAGTCAGCTGGAAGCCATTCACAGGCAAGCTGCCCGACCTTAGCGATGTCGCCCAGGCCATCCGCGACAACCCGCGCGTGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4451178‑4451327 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtgcagcTGGTAAGGCCACAGGTAGCTGCGGCTCAGGCGCTGGCTGGCATTGGCGATGCCGCCGTCGACATCGCCCTGGTCCAGCACGGTGCGCTGCACGCGCGGGTTGTCGCGGATGGCCTGGGCGACATCGCTAAGGTCGGGCAGCTTGCCTG < NC_002947/4451412‑4451265 TCCGCGACTTCGTCGGTGTGGTGGCAGAGCGCGAAGAGCAAGCCATCCGTGCAGCCCATGAGCTGAAAGTCAGCTGGAAGCCATTCACAGGCAAGCTGCCCGACCTTAGCGATGTCGCCCAGGCCATCCGCGACAACCCGCGCGTGCAG > 5:64455/1‑149 GTCAGCTGGAAGCCATTCACAGGCAAGCTGCCCGACCTTAGCGATGTCGCCCAGGCCATCCGCGACAACCCGCGCGTGCAGCTGGTAAGGCCACAGGTAGCTGCGGCTCAGGCGCTGGCTGGCATTGGCGATGCCGCCGTCGACATCGC > 3:8996/1‑149 CCGACCTTAGCGATGTCGCCCAGGCCATCCGCGACAACCCGCGCGTGCAGCTGGTAAGGCCACAGGTAGCTGCGGCTCAGGCGCTGGCTGGCATTGGCGATGCCGCCGTCGACATCGCCCTGGTCCAGCACGGTGCGCTGCACGCGCGG < 4:8996/149‑1 CCTTAGCGATGTCGCCCAGGCCATCCGCGACAACCCGCGCGTGCAGCTGGTAAGGCCACAGGTAGCTGCGGCTCAGGCGCTGGCTGGCATTGGCGATGCCGCCGTCGACATCGCCCTGGTCCAGCACGGTGCGCTGCACGCGCGGGTTG < 5:17635/149‑1 GCGTGCAGCTGGTAAGGCCACAGGTAGCTGCGGCTCAGGCGCTGGCTGGCATTGGCGATGCCGCCGTCGACATCGCCCTGGTCCAGCACGGTGCGCTGCACGCGCGGGTTGTCGCGGATGGCCTGGGCGACATCGCTAAGGTCGGGCAG > 8:227488/1‑149 CTGGTAAGGCCACAGGTAGCTGCGGCTCAGGCGCTGGCTGGCATTGGCGATGCCGCCGTCGACATCGCCCTGGTCCAGCACGGTGCGCTGCACGCGCGGGTTGTCGCGGATGGCCTGGGCGACATCGCTAAGGTCGGGCAGCTTGCCTG < 1:43846/149‑1 TCCGCGACTTCGTCGGTGTGGTGGCAGAGCGCGAAGAGCAAGCCATCCGTGCAGCCCATGAGCTGAAAGTCAGCTGGAAGCCATTCACAGGCAAGCTGCCCGACCTTAGCGATGTCGCCCAGGCCATCCGCGACAACCCGCGCGTGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4451178‑4451327 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtgcagcTGGTAAGGCCACAGGTAGCTGCGGCTCAGGCGCTGGCTGGCATTGGCGATGCCGCCGTCGACATCGCCCTGGTCCAGCACGGTGCGCTGCACGCGCGGGTTGTCGCGGATGGCCTGGGCGACATCGCTAAGGTCGGGCAGCTTGCCTG < NC_002947/4451412‑4451265 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |