New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4451327 | 58 (0.940) | 3 (0.050) | 3/248 | NT | 5.6% | coding (931/3564 nt) | nicB | nicotinate dehydrogenase subunit B |
? | NC_002947 | = 4451412 | 47 (0.810) | coding (1016/3564 nt) | nicB | nicotinate dehydrogenase subunit B |
ACAGGCAAGCTGCCCGACCTTAGCGATGTCGCCCAGGCCATCCGCGACAACCCGCGCGTGCAGCGCACCGTGCTGGACCAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCGTGTGGTCAGGTACGCAGAACCCGCACCTGCTGCGCGCAGACCTGGCCTGGCTGCTGGCGTGCGATGAAGCACGCATCGAGATCATT > NC_002947/4451264‑4451560 | acaGGCAAGCTGCCCGACCTTAGCGATGTCGCCCAGGCCATCCGCGACAACCCGCGCGTGCAGCGCACCGTGCTGGACCAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCa > 2:387820/1‑149 (MQ=255) cAGGCAAGCTGCCCGACCTTAGCGATGTCGCCCAGGCCATCCGCGACAACCCGCGCGTGCAGCGCACCGTGCTGGACCAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAg < 1:43846‑M2/149‑2 (MQ=255) cTGCCCGACCTTAGCGATGTCGCCCAGGCCATCCGCGACAACCCGCGCGTGCAGCGCACCGTGCTGGACCAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAgctgcacgc > 8:227488‑M2/1‑140 (MQ=255) tGCCCGACCTTAGCGATGTCGCCCAGGCCATCCGCGACAACCCGCGCGTGCAGCGCACCGTGCTGGACCAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCa > 3:251728/1‑149 (MQ=255) gCCCGACCTTAGCGATGTCGCCCAGGCCATCCGCGACAACCCGCGCGTGCAGCGCACCGTGCTGGACCAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCat < 8:134388/149‑1 (MQ=255) cccGACCTTAGCGATGTCGCCCAGGCCATCCGCGACAACCCGCGCGTGCAGCGCACCGTGCTGGACCAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCatc > 1:143507/1‑149 (MQ=255) cccGACCTTAGCGATGTCGCCCAGGCCATCCGCGACAACCCGCGCGTGCAGCGCACCGTGCTGGACCAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCat < 1:71716/148‑1 (MQ=255) gCGATGTCGCCCAGGCCATCCGCGACAACCCGCGCGTGCAGCGCACCGTGCTGGACCAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCca > 4:123398/1‑149 (MQ=255) tGTCGCCCAGGCCATCCGCGACACCCCGCGCGTGCAGCGCACCGTGCTGGACCAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCcatcat > 6:311267/1‑149 (MQ=255) tCGCCCAGGCCATCCGCGACAACCCGCGCGTGCAGCGCACCGTGCTGGACCAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCAtgt < 3:244883/149‑1 (MQ=255) cGCCCAGGCCATCCGCGACAACCCGCGCGTGCAGCGCACCGTGCTGGACCAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCAtgtg > 7:104610/1‑149 (MQ=255) gCCCAGGCCATCCGCGACAACCCGCGCGTGCAGCGCACCGTGCTGGACCAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCAtgtg < 3:96379/148‑1 (MQ=255) gcgACAACCCGCGCGTGCAGCGCACCGTGCTGGACCAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACtt > 6:138607/1‑148 (MQ=255) gcgACAACCCGCGCGTGCAGCGCACCGTGCTGGACCAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTc > 4:138431/1‑149 (MQ=255) cAACCCGCGCGTGCAGCGCACCGTGCTGGACCAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAgctgcacgcgcgggttgtcgcggatggcctgggcgacatcgctaagg < 5:17635‑M2/149‑48 (MQ=255) ccGCGCGTGCAGCGCACCGTGCTGGACCAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAgctgcacgcgcgggttgtcgcggatggcctgggcgacatcgctaaggtcgg < 4:8996‑M2/149‑52 (MQ=255) ccGCGCGTGCAGCGCACCGTGCTGGACCAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAgg > 3:78699/1‑149 (MQ=255) cgcgcgTGCAGCGCACCGTGCTGGACCAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAggg > 1:338388/1‑149 (MQ=255) cgcgcgTGCAGCGCACCGTGCTGGACCAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAggg < 2:167416/149‑1 (MQ=255) gCAGCGCACCGTGCTGGACCAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATcc > 6:75551/1‑149 (MQ=255) aGCGCACCGTGCTGGACCAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCcgc > 4:169138/1‑149 (MQ=255) aGCGCACCGTGCTGGACCAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCcgc < 1:387820/149‑1 (MQ=255) cgcACCGTGCTGGACCAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCgt < 5:4156/149‑1 (MQ=255) cgcACCGTGCTGGACCAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCgt < 5:138607/149‑1 (MQ=255) cgcACCGTGCTGGACCAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCgt < 8:202738/149‑1 (MQ=255) gcACCGTGCTGGACCAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCgtg > 5:137561/1‑149 (MQ=255) aCCGTGCTGGACCAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGc < 6:358255/136‑1 (MQ=255) aCCGTGCTGGACCAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGc > 5:358255/1‑136 (MQ=255) aCCGTGCTGGACCAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCGtgtg < 4:251728/149‑1 (MQ=255) cAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCGTGTGGTCAGGTACGCa < 2:338388/149‑1 (MQ=255) gggCGATGTCGACGGCGACATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCGTGTGGTCAGGTACGCAg > 8:135417/1‑148 (MQ=255) gCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAgctgcacgcgcgggttgtcgcggatggcctgggcgacatcgctaaggtcgggcagcttgcctgtgaatggcttccagctgac > 3:8996‑M2/1‑67 (MQ=255) gCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCGTGTGGTCAGGTACGCAGAAc < 6:335131/149‑1 (MQ=255) tCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCGTGTGGTCAGGTACGCAGAACCCGCAc < 4:78699/149‑1 (MQ=255) cGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCGTGTGGTCAGGTACGCAGAACCCGCAcc > 5:379635/1‑149 (MQ=255) gACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCGTGTGGTCAGGTACGCAGAACCCGCACct > 2:374025/1‑149 (MQ=255) cggcATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCGTGTGGTCAGGTACGCTGAACCCGCACCtgctgc < 6:132485/149‑1 (MQ=255) gCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCGTGTGGTCAGGTACGCAGAACCCGCACCTGCTGCGCGCAGa > 3:286612/1‑149 (MQ=255) tGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCGTGTGGTCAGGTACGCAGAACCCGCACCTGCTGCGCGCAGAcctgg > 7:232437/1‑149 (MQ=255) cagccagcGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCGTGTGGTCAGGTACGCAGAACCCGCACCTGCTGCGCGCAGAcctggcct < 5:28551/149‑1 (MQ=255) gccagcGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCGTGTGGTCAGGTACGCAGAACCCGCACCTGCTGCGCGCAGAcctggcctgg < 3:123398/149‑1 (MQ=255) gcgcCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCGTGTGGTCAGGTACGCAGAACCCGCACCTGCTGCGCGCAGACCTGGCCTGgctgc < 3:169138/149‑1 (MQ=255) cgcCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGAGCACTGGCCGACTTCACCGCAGGGCAGATCCGCGTGTGGTCAGGTACGCAGAACCCGCACCTGCTGCGCGCAGACCTGGCCTGgctgct < 5:311267/149‑1 (MQ=255) gcCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCGTGTGGTCAGGTACGCAGAACCCGCACCTGCTGCGCGCAGACCTGGCCTGGctgctg < 4:286612/149‑1 (MQ=255) cTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCGTGTGGTCAGGTACGCAGAACCCGCACCTGCTGCGCGCAGACCTGGCCTGGCTGCTGGc < 2:143507/149‑1 (MQ=255) tGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCACATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCGTGTGGTCAGGTACGCAGAACCAGCACCTGCTGCTCGCAGACATGGCCTGGCTGCTGGCg > 6:384450/1‑149 (MQ=255) ccGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCGTGTGGTCAGGTACGCAGAACCCGCACCTGCTGCGCGCAGACCTGGCCTGGCTGCTGGCGTGc > 1:351973/1‑148 (MQ=255) ccGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCGTGTGGTCAGGTACGCAGAACCCGCACCTGCTGCGCGCAGACCTGGCCTGGCTGCTGGCGTGCg < 8:104610/149‑1 (MQ=255) gCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCGTGTGGTCAGGTACGCAGAACCCGCACCTGCTGCGCGCAGACCTGGCCTGGCTGCTGGCGTGCGAt > 5:368097/1‑149 (MQ=255) gCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCGTGTGGTCAGGTACGCAGAACCCGCACCTGCTGCGCGCAGACCTGGCCTGGCTGCTGGCGTGCGATGaa < 7:97335/149‑1 (MQ=255) aCCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCGTGTGGTCAGGTACGCAGAACCCGCACCTGCTGCGCGCAGACCTGGCCTGGCTGCTGGCGTGCGATGAAGCa > 5:55912/1‑149 (MQ=255) gCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCGTGTGGTCAGGTACGCAGAACCCGCACCTGCTGCGCGCAGACCTGGCCTGGCTGCTGGCGTGCGATGAAGCACGCATc > 3:285663/1‑148 (MQ=255) gCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGCCCGACTTCACCGCAGGGCAGATCCGCGTGTGGTCAGGTACGCAGAACCCGCACCTGCTGCGCGCAGACCTGGCCTGGCTGCTGGCGTGCGATGAAGCACGCATc > 6:333613/1‑148 (MQ=255) ccTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCATGGCAGATCCGCGTGTGGTCAGGTACGCAGAACCCGCACCTGCTGCGCGCAGACCTGGCCTGGCTGCTGGCGTGCGATGAAGCACGCATCga > 5:289524/1‑149 (MQ=255) ccTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCGTGTGGTCAGGTACGCAGAACCCGCACCTGCTGCGCGCAGACCTGGCCTGGCTGCTGGCGTGCGATGAAGCACGCATCga < 6:289524/149‑1 (MQ=255) cTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCGTGTGGTCAGGTACGCAGAACCCGCACCTGCTGCGCGCAGACCTGGCCTGGCTGCTGGCGTGCGATGAAGCACGCATc > 6:138181/1‑146 (MQ=255) cTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCGTGTGGTCAGGTACGCAGAACCCGCACCTGCTGCGCGCAGACCTGGCCTGGCTGCTGGCGTGCGATGAAGCACGCATc > 5:16718/1‑146 (MQ=255) aGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCGTGTGGTCAGGTACGCAGAACCCGCACCTGCTGCGCGCAGACCTGGCCTGGCTGCTGGCGTGCGATGAAGCATGCATCGAGATCAtt < 5:75551/149‑1 (MQ=255) | ACAGGCAAGCTGCCCGACCTTAGCGATGTCGCCCAGGCCATCCGCGACAACCCGCGCGTGCAGCGCACCGTGCTGGACCAGGGCGATGTCGACGGCGGCATCGCCAATGCCAGCCAGCGCCTGAGCCGCAGCTACCTGTGGCCTTACCAGCTGCACGCATCGATCGGCCCATCATGTGCACTGGCCGACTTCACCGCAGGGCAGATCCGCGTGTGGTCAGGTACGCAGAACCCGCACCTGCTGCGCGCAGACCTGGCCTGGCTGCTGGCGTGCGATGAAGCACGCATCGAGATCATT > NC_002947/4451264‑4451560 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |