| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4520708 | 58 (0.940) | 4 (0.070) | 4/254 | NT | 7.2% | coding (1030/1257 nt) | icd | NADP(+)‑specific isocitrate dehydrogenase |
| ? | NC_002947 | = 4520754 | 48 (0.810) | coding (984/1257 nt) | icd | NADP(+)‑specific isocitrate dehydrogenase | |||||
ATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTGGTGCCCTTGATGATCAGGTCGGCGGCCTCGGTCCACCCCATGTGGCGCAGCATCATCTCTGCCGAGAGGATCACCGAGCCCGGGTTGACCTTGTCCTGCCCGGCATACTTGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4520556‑4520708‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgcCAACCTGTCCGACACCGTGGCCATGTTCGAGGCCACTCACGGCACTGCGCCCAAGTATGCCGGGCAGGACAAGGTCAACCCGGGCTCGGTGATCCTCTCGGCAGAGATGATGCTGCGCCACATGGGGTGGACCGAGGCCGCCGACC < NC_002947/4520754‑4520609 ATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTGGTGCCCTTGATGATCAGGTCGGCGGCCTCGGTCCACCCCATGTGGCGCAGCATCATCTCTGCCGAGAGGATCACCGAGCCCGGGTTGACCTTGTCCTGCCCGGCATACTTGG < 1:92326/149‑1ATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTGGTGCCCTTGATGATCAGGTCGGCGGCCTCGGTCCACCCCATGTGGCGCAGCATCATCTCTGCCGAGAGGATCACCGAGCCCGGGTTGACCTTGTCCTGCCCGGCATACTTGG < 8:153806/149‑1 GTAGGTCACGGTCTTGGCCGCAATGGAGCCATTGGTGCCCTTGATGATCAGGTCGGCGGCCTCGGTCAACCCAATGTGGCGCAGCATCATCTCTGCCGTGAGGAGCACCGAGCCCGGGTTGAACTTGTCCTGCCCGGCATACTTGGGCG > 7:126198/1‑149 TTGGCCGCAATGGCGCCATTGGTGCCCTTGATGATCAGGTCGGCGGCCTCGGTCCACCCCATGTGGCGCAGCATCATCTCTGCCGAGAGGATCACCGAGCCCGGGTTGACCTTGTCCTGCCCGGCATACTTGGGCGCCAACCTGTCCGA > 7:350849/1‑149 GCGGCCTCGGTCCACCCCATGTGGCGCAGCATCATCTCTGCCGAGAGGATCACCGAGCCCGGGTTGACCTTGTCCTGCCCGGCATACTTGGGCGCCAACCTGTCCGACACCGTGGCCATGTTCGAGGCCACTCACGGCACTGCGCCCAA < 8:350849/149‑1 GGCCTCGGTCCACCCCATGTGGCGCAGCATCATCTCTGCCGATAGGATCACCGAGCCCGGGTGGACCTTGTCCTGCCCGCCATACTTGGGCGCCAACCTGTCCGACACCGTGGCCATGTTCGAGGCCACTCACGGCACTGCGCCCAAGT < 3:295654/149‑1 GCCTCGGTCCACCCCATTTGGCGCAGCATCATCTCTGCCGAGAGGATCACCGAGCCCTGGTTGACCTTGTCCTGCCCGGCATACTTGGGCGCCAACCTGTCCGACACCGTGGCCATGTTCGAGGCCACTCACGGCACTGCGCCCAAGTA < 8:232186/149‑1 CGCCAACCTGTCCGACACCGTGGCCATGTTCGAGGCCACTCACGGCACTGCGCCCAAGTATGCCGGGCAGGACAAGGTCAACCCGGGCTCGGTGATCCTCTCGGCAGAGATGATGCTGCGCCACATGGGGTGGACCGAGGCCGCCGACC < 3:115829/149‑1 CGCCAACCTGTCCGACACCGTGGCCATGTTCGAGGCCACTCACGGCACTGCGCCCAAGTATGCCGGGCAGGACAAGGTCAACCCGGGCTCGGTGATCCTCTCGGCAGAGATGATGCTGCGCCACATGGGGTGGACCGAGGCCGCCGACC < 4:32700/149‑1 ATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTGGTGCCCTTGATGATCAGGTCGGCGGCCTCGGTCCACCCCATGTGGCGCAGCATCATCTCTGCCGAGAGGATCACCGAGCCCGGGTTGACCTTGTCCTGCCCGGCATACTTGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4520556‑4520708‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgcCAACCTGTCCGACACCGTGGCCATGTTCGAGGCCACTCACGGCACTGCGCCCAAGTATGCCGGGCAGGACAAGGTCAACCCGGGCTCGGTGATCCTCTCGGCAGAGATGATGCTGCGCCACATGGGGTGGACCGAGGCCGCCGACC < NC_002947/4520754‑4520609 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |