New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5229623	63 (1.020)	4 (0.070)	3/256	NT	5.9%	coding (592/981 nt)	PP_4607	transmembrane sensor
	?	NC_002947	= 5229644	67 (1.120)					coding (571/981 nt)	PP_4607	transmembrane sensor

GTCACTGTCCACCGCCAAGGTGTCGCCTACCCTACCTGCGCGGTAGGTCAGCTGCTGGTTGGCAGTCAGTTCTCGCGCCACAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5229474‑5229623 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctcGGCACCCAGTTCGAGGTGCGTGAGCAAGGCGAGGGCGCCCAGGTGACGGTGCGCAGCGGGCGTGTGGGCGTCAGCCCCGCGCAGGGCACTGTGGCGCGAGAACTGACTGCCAACCAGCAGCTGACCTACCGCGCAGGTAGGGTAGGC  <  NC_002947/5229644‑5229498                                                                                                                                                                                                                                                                                                           GTCACTGTCCACCGCCAAGGTGTCGCCTACCCTACCTGCGCGGTAGGTCAGCTGCTGGTTGGCAGTCAGTTCTCGCGCCACAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGC                                                                                                                                                       <  6:175904/148‑1    ACTGTCCCCCGCCAAGGTGTCGCCTACCCTACCTGCGCGGTAGGTCAGCTGCTGGTTGGCAGTCAGTTCTCGCGCCACAGTGCCCTGCGCGGGGCTGACGCCCCCCCGCCCGCTGCGCACCGGCCCCTGGGCGCCCTCGCCTTGCgccc                                                                                                                                                   >  5:104684/1‑145                              CCCTACCTGCGCGGTAGGTCAGCTGCTGGTTGGCAGTCAGTTCTCGCGCCACAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCGGCACCCAGTTCGAGGTGCGTGAGCAAG                                                                                                                         <  7:47500/149‑1                                CTACCTGCGCGGTAGGTCAGCTGCTGGTTGGCAGTCAGTTCTCGCGCCACAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCGGCACCCAGTTCGAGGTGCGTGAGCAAGGC                                                                                                                       <  2:324756/149‑1                                                                      TTCTCGCGCCACAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCGGCACCCAGTTCGAGGTGCGTGAGCAAG                                                                                                                         >  1:301650/1‑109                                                                      TTCTCGCGCCACAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCGGCACCCAGTTCGAGGTGCGTGAGCAAG                                                                                                                         <  2:301650/109‑1                                                                                                                                                  TGCTCGGCACCCAGTTCGAGGTGCGTGAGCAAGGCGAGGGCGCCCAGGTGACGGTGCGCAGCGGGCGTGTGGGCGTCAGCCCCGCGCAGGGCACTGTGGCGCGAGAACTGACTGCCAACCAGCAGCTGACCTACCGCGCA              >  7:179363/1‑140                                                                                                                                                  TGCTCGGCACCCAGTTCGAGGTGCGTGAGCAAGGCGAGGGCGCCCAGGTGACGGTGCGCAGCGGGCGTGTGGGCGTCAGCCCCGCGCAGGGCACTGTGGCGCGAGAACTGACTGCCAACCAGCAGCTGACCTACCGCGCA              <  8:179363/140‑1                                                                                                                                                  TGCTCGGCACCCAGTTCGAGGTGCGTGAGCAAGGCGAGGGCGCCCAGGTGACGGTGCGCAGCGGGCGTGTGGGCGTCAGCCCCGCGCAGGGCACTGGGGCGCGAGAACTGACTGCCAACCAGCAGCTGACCTACCGCGCAGGTAGGGTA     <  8:92368/149‑1                                                                                                                                                     TCGGCACCCAGTTCGAGGTGCGTGAGCAAGGCGAGGGCGCCCAGGTGACGGTGCGCAGCGGGCGTGTGGGCGTCAGCCCCGCGCAGGGCACTGTGGCGCGAGAACTGACTGCCAACCAGCAGCTGACCTACCGCGCAGGTAGGGTAGGC  >  5:65691/1‑149                                                                                                                                                     TCGGCACCCAGTTCGAGGTGCGTGAGCAAGGCGAGGGCGCCCAGGTGACGGTGCGCAGCGGGCGTGTGGGCGTCAGCCCCGCGCAGGGCACTGTGGCGCGAGAACTGACTGCCAACCAGCAGCTGACCTACCGCGCAGGTAGGGTAGGC  >  6:172197/1‑149                                                                                                                                                     TCGGCACCCAGTTCGAGGTGCGTGAGCAAGGCGAGGGCGCCCAGGTGACGGTGCGCAGCGGGCGTGTGGGCGTCAGCCCCGCGCAGGGCACTGTGGCGCGAGAACTGACTGCCAACCAGCAGCTGACCTACCGCGCAGGTAGGGTAGGC  >  8:194606/1‑149                                                                                                                                                                                                                                                                                                           GTCACTGTCCACCGCCAAGGTGTCGCCTACCCTACCTGCGCGGTAGGTCAGCTGCTGGTTGGCAGTCAGTTCTCGCGCCACAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5229474‑5229623 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctcGGCACCCAGTTCGAGGTGCGTGAGCAAGGCGAGGGCGCCCAGGTGACGGTGCGCAGCGGGCGTGTGGGCGTCAGCCCCGCGCAGGGCACTGTGGCGCGAGAACTGACTGCCAACCAGCAGCTGACCTACCGCGCAGGTAGGGTAGGC  <  NC_002947/5229644‑5229498

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.