New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5229623	63 (1.020)	4 (0.070)	3/256	NT	5.9%	coding (592/981 nt)	PP_4607	transmembrane sensor
	?	NC_002947	= 5229644	67 (1.120)					coding (571/981 nt)	PP_4607	transmembrane sensor

ACTGTCCACCGCCAAGGTGTCGCCTACCCTACCTGCGCGGTAGGTCAGCTGCTGGTTGGCAGTCAGTTCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCGGTATGGGTAACCTCGAAGAACGCCGCGCCATGCAGCAACCGCACACGGCGCTCACCCTGGGCGAAATCGACCGCAA  >  NC_002947/5229477‑5229769                                                                                                                                                    |                                                                                                                                                    aCTGTCCACCGCCAAGGTGTCGCCTACCCTACCTGCGCGGTAGGTCAGCTGCTGGTTGGCAGTCAGTTCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCa                                                                                                                                                    <  6:191747/148‑1 (MQ=255)   tGTCCACCGCCAAGGTGTCGCCTACCCTACCTGCGCGGTAGGTCAGCTGCTGGTTGGCAGTCAGTTCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACg                                                                                                                                                  >  8:170624/1‑148 (MQ=255)        aCCGCCAAGGTGTCGCCTACCCTACCTGCGCGGTAGGTCAGCTGCTGGTTGGCAGTCAGTTCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTc                                                                                                                                            >  2:215049/1‑149 (MQ=255)        aCCGCCAAGGTGTCGCCTACCCTACCTGCGCGGTAGGTCAGCTGCTGGTTGGCAGTCAGTTCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTc                                                                                                                                            <  2:352575/149‑1 (MQ=255)         acGCCAAGGTGTCGCCTACCCTACCTGCGCGGTAGGTCAGCTGCTGGTTGGCAGTCAGTTCTCGCGCCA‑CAGTCCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCCCACCGTCAACTGGGCGCCCACGCCATGCTCACGCACCTc                                                                                                                                            >  8:63149/2‑148 (MQ=255)           gCCAAGGTGTCGCCTACCCTACCTGCGCGGTAGGTCAGCTGCTGGTTGGCAGTCAGTTCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGaa                                                                                                                                         <  2:170740/149‑1 (MQ=255)                  tgtCGCCTACCCTACCTGCGCGGTAGGTCAGCTGCTGGTTGGCAGTCAGTTCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCCCCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTg                                                                                                                                  >  2:143190/1‑149 (MQ=255)                   gtCGCCTACCCTACCTGCGCGGTAGGTCAGCTGCTGGTTGGCAGTCAGTTCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGc                                                                                                                                 >  7:194606/1‑149 (MQ=255)                      gCCTACCCTACCTGCGCGGTAGGTCAGCTGCTGGTTGGCAGTCAGTTCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCga                                                                                                                              >  5:65691‑M2/1‑147 (MQ=255)                      gCCTACCCTACCTGCGCGGTAGGTCAGCTGCTGGTTGGCAGTCAGTTCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCga                                                                                                                              >  8:194606‑M2/1‑147 (MQ=255)                      gCCTACCCTACCTGCGCGGTAGGTCAGCTGCTGGTTGGCAGTCAGTTCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCga                                                                                                                              >  6:172197‑M2/1‑147 (MQ=255)                         taccctaccTGCGCGGTAGGTCAGCTGCTGGTTGGCAGTCAGTTCTCGCGCCC‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCgagca                                                                                                                           <  8:92368‑M2/149‑6 (MQ=255)                           ccctaccTGCGCGGTAGGTCAGCTGCTGGTTGGCAGTCAGTTCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCggcacccagttcgaggtgcgtgagcaag                                                                                                                         <  7:47500‑M1/149‑29 (MQ=255)                             ctaccTGCGCGGTAGGTCAGCTGCTGGTTGGCAGTCAGTTCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCggcacccagttcgaggtgcgtgagcaaggc                                                                                                                       <  2:324756‑M1/149‑31 (MQ=255)                                 cTGCGCGGTAGGTCAGCTGCTGGTTGGCAGTCAGTTCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACt                                                                                                                   >  8:60832/1‑149 (MQ=255)                                  tGCGCGGTAGGTCAGCTGCTGGTTGGCAGTCAGTTCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCgagca                                                                                                                           <  8:179363‑M2/140‑6 (MQ=255)                                  tGCGCGGTAGGTCAGCTGCTGGTTGGCAGTCAGTTCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCgagca                                                                                                                           >  7:179363‑M2/1‑135 (MQ=255)                                    ctcgGTAGGTCAGCTGATGTTTGGCAGTCAGTTCTCTCGCCA‑CAGTGCCGTGCGCGGGGCTGACGCCCACACGCCCGCTGCTAACCGTCACCTGGGCGCCCTCGCCTTTCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTcg                                                                                                                <  5:143260/147‑1 (MQ=255)                                     gcgGTAGGTCAGCTGCTGGTTGGCAGTCAGTTCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTcgc                                                                                                               >  1:265530/1‑149 (MQ=255)                                           ggTCAGCTGCTGGTTGGCAGTCAGTTCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGccgc‑cg                                                                                                         <  2:265530/148‑1 (MQ=255)                                           ggTCAGCTGCTGGTTGGCAGTCAGTTCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑Cgg                                                                                                        <  7:150928/149‑1 (MQ=255)                                               aGCTGCTGGTTGGCAGTCAGTTCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGc                                                                                                    >  5:253613/1‑149 (MQ=255)                                                            cagtcagtTCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAAc                                                                                       <  7:170624/149‑1 (MQ=255)                                                            cagtcagtTCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAAc                                                                                       <  7:63149/149‑1 (MQ=255)                                                            cagtcagtTCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAAc                                                                                       >  1:102893/1‑149 (MQ=255)                                                             agtcagtTCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACg                                                                                      >  8:299888/1‑149 (MQ=255)                                                             agtcagtTCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACg                                                                                      >  3:347756/1‑149 (MQ=255)                                                             agtcagtTCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGCAACg                                                                                      >  6:49175/1‑149 (MQ=255)                                                              gtcagtTCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACgg                                                                                     >  5:215266/1‑149 (MQ=255)                                                               tcagtTCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACgg                                                                                     >  6:346886/1‑148 (MQ=255)                                                               tcagtTCTCGCCCCACCAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACgg                                                                                     <  1:135491/149‑1 (MQ=255)                                                                  gtTCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCa                                                                                 >  6:361296/1‑149 (MQ=255)                                                                   ttCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCggcacccagttcgaggtgcgtgagcaag                                                                                                                         <  2:301650‑M1/109‑29 (MQ=255)                                                                   ttCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCggcacccagttcgaggtgcgtgagcaag                                                                                                                         >  1:301650‑M1/1‑81 (MQ=255)                                                                   ttCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCAc                                                                                >  2:226547/1‑149 (MQ=255)                                                                      tcGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCgg                                                                             >  7:37428/1‑149 (MQ=255)                                                                      tcGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCgg                                                                             >  4:98615/1‑149 (MQ=255)                                                                      tcGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCgg                                                                             >  6:264427/1‑149 (MQ=255)                                                                       cgcgCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCgg                                                                             >  1:35677/1‑148 (MQ=255)                                                                       cgcgCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCgg                                                                             >  1:239680/1‑148 (MQ=255)                                                                        gcgcCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCg                                                                              <  4:43496/146‑1 (MQ=255)                                                                        gcgcCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCGGTa                                                                           <  7:92368/149‑1 (MQ=255)                                                                           ccA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGGACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCGGTATgg                                                                        <  5:49175/149‑1 (MQ=255)                                                                           ccA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCGGTATgg                                                                        <  1:226547/149‑1 (MQ=255)                                                                             a‑caGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCGGTATGGGt                                                                      <  6:253613/149‑1 (MQ=255)                                                                                      cTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCGGTATGGGTAACCTCga                                                              <  7:60832/149‑1 (MQ=255)                                                                                      cTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCGGTATGGGTAACCTCg                                                               >  4:324114/1‑148 (MQ=255)                                                                                         cgcgGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCGGTATGGGTAACCTCgaag                                                            >  6:196659/1‑148 (MQ=255)                                                                                           cgGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTc                                                                                                                 <  8:154403/94‑1 (MQ=255)                                                                                           cgGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTc                                                                                                                 >  7:154403/1‑94 (MQ=255)                                                                                                cTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCGGTATGGGTAACCTCGAAGAAcgccgc                                                    >  3:246934/1‑149 (MQ=255)                                                                                                  gACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCg                                                                              <  3:281152/121‑1 (MQ=255)                                                                                                  gACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCg                                                                              >  4:281152/1‑121 (MQ=255)                                                                                                       ccACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACgg                                                                                     >  3:232764/1‑109 (MQ=255)                                                                                                       ccACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACgg                                                                                     <  4:232764/109‑1 (MQ=255)                                                                                                       ccACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCGCCGGTATGGGTAACCTCGAAGAACGCCGCGCCATg                                              >  8:132503/1‑148 (MQ=255)                                                                                                       ccACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCGGTATGGGTAACCTCGAAGAACGCCGCGCCATgc                                             <  5:196659/149‑1 (MQ=255)                                                                                                       ccACACGCCCGCTGCGCACCGACACCTGGGCGCCCTCGCCTTGCACACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCGGTATGGGTAACCTCGAAGAACGCCGCGCCATg                                              >  6:334204/1‑148 (MQ=255)                                                                                                        cacaCGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCGGTATGGGTAACCTCGAAGAACGCCGCGCCATgca                                            <  4:347756/149‑1 (MQ=255)                                                                                                        cacaCGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCGGTATGGGTAACCTCGAAGAACGCCGCGCCATgca                                            <  2:102893/149‑1 (MQ=255)                                                                                                        cacaCGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCGGTATGGGTAACCTCGAAGAACGCCGCGCCATgca                                            <  6:215266/149‑1 (MQ=255)                                                                                                                cGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCGGTATGGGTAACCTCAAAGAACGCCGCGCCATGCAGCAACCg                                     >  5:287108/1‑148 (MQ=255)                                                                                                                  cTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCGGTATGGGTAACCTCGAAGAACGCCGCGCCATGCAGCAACCGcac                                  <  2:239680/149‑1 (MQ=255)                                                                                                                             cACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCGGTATGGGTAACCTCGAAGAACGCCGCGCCATGCAGCAACCGCACACGGCGCTc                         >  7:94214/1‑147 (MQ=255)                                                                                                                             cACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCGGTATGGGTAACCTCGAAGAACGCCGCGCCATGCAGCAACCGCACACGGCGCTc                         <  8:94214/147‑1 (MQ=255)                                                                                                                              aCCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCGGTATGGGTAACCTCGAAGAACGCCGCGCCATGCAGCAACCGCACACGGCGCTCAcc                      >  4:210899/1‑149 (MQ=255)                                                                                                                                cTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTccacca                                                                                            <  7:199135/77‑1 (MQ=255)                                                                                                                                cTGGGCGCCCTCGCCTTCCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTccacca                                                                                            >  8:199135/1‑77 (MQ=255)                                                                                                                                   ggCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCGGTATGGGTAACCTCGAAGAACGCCGCGCCATGCAGCAACCGCACACGGCGCTCACCCTggg                 <  8:37428/149‑1 (MQ=255)                                                                                                                                   ggCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCGGTATGGGTAACCTCGAAGAACGCCGCGCCATGCAGCAACCGCACACGGCGCTCACCCTgg                  <  7:299888/148‑1 (MQ=255)                                                                                                                                        ccTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCGGTATGGGTAACCTCGAAGAACGCCGCGCCATGCAGCAACCGCACACGGCGCTCACCCTGGGCGaaa            >  1:199816/1‑149 (MQ=255)                                                                                                                                          tCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCGGTATGGGTAACCTCGAAGAACGCCGCGCCATGCAGCAAcc                                      <  7:31436/121‑1 (MQ=255)                                                                                                                                          tCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCGGTATGGGTAACCTCGAAGAACGCCGCGCCATGCAGCAAcc                                      >  8:31436/1‑121 (MQ=255)                                                                                                                                            gCCTTGCTCACGCACCTCGAACTGGGTGCCgagcaaggcgagggcgcccaggtgacggtgcgcagcgggcgtgtgggcgtcagccccgcgcagggcactgtggcgcgagaactgactgccaaccagcagctgacctaccgcgcaggtag         <  2:324756‑M2/149‑120 (MQ=255)                                                                                                                                              cTTGCTCACGCACCTCGAACTGGGTGCCgagcaaggcgagggcgcccaggtgacggtgcgcagcgggcgtgtgggcgtcagccccgcgcagggcactgtggcgcgagaactgactgccaaccagcagctgacctaccgcgcaggtaggg       <  7:47500‑M2/149‑122 (MQ=255)                                                                                                                                              cTTGCTCACGCACCTCGAACTGGGTGCCgagcaaggcgagggcgcccaggtgacggtgcgcagcgggcgtgtgggcgtcagccccgcgcagggcactgtggcgcgagaa                                               <  2:301650‑M2/109‑82 (MQ=255)                                                                                                                                              cTTGCTCACGCACCTCGAACTGGGTGCCgagcaaggcgagggcgcccaggtgacggtgcgcagcgggcgtgtgggcgtcagccccgcgcagggcactgtggcgcgagaa                                               >  1:301650‑M2/1‑28 (MQ=255)                                                                                                                                              cTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCGGTATGGGTAACCTCGAAGAACGCCGCGCCATGCAGCAACCGCACACGGCGCTCACCCTGGGCGAAATCGAcc      >  5:180544/1‑149 (MQ=255)                                                                                                                                              cTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGCAACGGCTCACCGGTATGGGTAACCTCGAAGAACGCCGCGCCATGCAGCAACCGCACCCGGCGCTCACCCTGGGCGAAATCGAcc      <  1:215049/149‑1 (MQ=255)                                                                                                                                                tGCTCggcacccagttcgaggtgcgtgagcaaggcgagggcgcccaggtgacggtgcgcagcgggcgtgtgggcgtcagccccgcgcagggcactgtggcgcgagaactgactgccaaccagcagctgacctaccgcgca              <  8:179363‑M1/140‑136 (MQ=255)                                                                                                                                                tGCTCggcacccagttcgaggtgcgtgagcaaggcgagggcgcccaggtgacggtgcgcagcgggcgtgtgggcgtcagccccgcgcagggcactgtggcgcgagaactgactgccaaccagcagctgacctaccgcgca              >  7:179363‑M1/1‑5 (MQ=255)                                                                                                                                                tGCTCggcacccagttcgaggtgcgtgagcaaggcgagggcgcccaggtgacggtgcgcagcgggcgtgtgggcgtcagccccgcgcagggcactggggcgcgagaactgactgccaaccagcagctgacctaccgcgcaggtagggta     <  8:92368‑M1/149‑145 (MQ=255)                                                                                                                                                 gCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CTGCAGCTTCCACCAGGAACGGCTCACCTGTATGGGTAACCTCGAAGAACGCCGCGCCATGCAGCAACCGCACACGGCTCTCACCCTGGGCGAAATCGACCg     <  5:346886/147‑1 (MQ=255)                                                                                                                                                  cTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGCGGGGCAGCTTCCACCAGGAACGGCTCACCGGTATGGGTAACCTCGAAGAACGCCGCGCCATGCAGCAACCGCACACGGCGCTCACCCTGGGCGAAATCGACCGc    >  1:276157/1‑148 (MQ=255)                                                                                                                                                  cTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCGGTATGGGTAACCTCGAAGAACGCCGCGCCATGCAGCAACCGCACACGGCGCTCACCCTGGGCGAAATCGACCGCaa  <  3:98615/149‑1 (MQ=255)                                                                                                                                                  cTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCGGTATGGGTAACCTCAAAGAACTCCGCGCCATGCAGCAACCGCACACGGCGCTCACCCTGGGCGAAATCGACCGCa   <  6:287108/148‑1 (MQ=255)                                                                                                                                                   tCggcacccagttcgaggtgcgtgagcaaggcgagggcgcccaggtgacggtgcgcagcgggcgtgtgggcgtcagccccgcgcagggcactgtggcgcgagaactgactgccaaccagcagctgacctaccgcgcaggtagggtaggc  >  8:194606‑M1/1‑2 (MQ=255)                                                                                                                                                   tCggcacccagttcgaggtgcgtgagcaaggcgagggcgcccaggtgacggtgcgcagcgggcgtgtgggcgtcagccccgcgcagggcactgtggcgcgagaactgactgccaaccagcagctgacctaccgcgcaggtagggtaggc  >  5:65691‑M1/1‑2 (MQ=255)                                                                                                                                                   tCggcacccagttcgaggtgcgtgagcaaggcgagggcgcccaggtgacggtgcgcagcgggcgtgtgggcgtcagccccgcgcagggcactgtggcgcgagaactgactgccaaccagcagctgacctaccgcgcaggtagggtaggc  >  6:172197‑M1/1‑2 (MQ=255)                                                                                                                                                    |                                                                                                                                                    ACTGTCCACCGCCAAGGTGTCGCCTACCCTACCTGCGCGGTAGGTCAGCTGCTGGTTGGCAGTCAGTTCTCGCGCCA‑CAGTGCCCTGCGCGGGGCTGACGCCCACACGCCCGCTGCGCACCGTCACCTGGGCGCCCTCGCCTTGCTCACGCACCTCGAACTGGGTGCCGAGCACCCGCACTTCGCCGC‑CGGCAGCTTCCACCAGGAACGGCTCACCGGTATGGGTAACCTCGAAGAACGCCGCGCCATGCAGCAACCGCACACGGCGCTCACCCTGGGCGAAATCGACCGCAA  >  NC_002947/5229477‑5229769

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.