New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5300626 =	51 (0.820)	3 (0.050)	3/252	NT	5.6%	coding (3147/3675 nt)	recB	Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease
	?	NC_002947	5300683 =	52 (0.890)					coding (3090/3675 nt)	recB	Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease

TGCAGCGTTTGCTGAGCGAGGCGTTGCCGCTGCCGGGCAGCGACCAGAGCGTAACGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5300684‑5300626 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacgctgCATCCAGTGGCTCAGGGTGGGGATCCAGCCGGCCCAGTCGCGGCGATTGCAGCGCTGGCCAACGGTACGCTCTATCAGTTGAGGGTTAGCGCTGACCTCGCTGAAGCCCTCACGGCCTGCCCACTCCAGCAAACCATGGAGGAAGG  >  NC_002947/5300683‑5300828                                                                                                                                                                                                               TGCAGCGTTTGCTGAGCGAGGCGTTGCCGCTGCCGGGCAGCGACCAGAGCGTAACGCTGCATCCAGTGGCTCAGGGTGGGGATCCAGCCGGCCCAGTCGCGGCGATTGCAGCGCTGGCCAACGGTACGCTCTATCAGTTGAGGGTTAGC                                                          >  3:379366/1‑149    AGCGTTTGCTGAGCGAGGCGTTGCCGCTGCCGGGCAGCGACCAGAGCGTAACGCTGCATCCAGTGGCTCAGGGTGGGGATCCAGCCGGCCCAGTCGCGGCGATTGCAGCGCTGGCCAACGGT                                                                                  <  7:187348/122‑1    AGCGTTTGCTGAGCGAGGCGTTGCCGCTGCCGGGCAGCGACCAGAGCGTAACGCTGCATCCAGTGGCTCAGGGTGGGGATCCAGCCGGCCCAGTCGCGGCGATTGCAGCGCTGGCCAACGGT                                                                                  >  8:187348/1‑122                                                        GCTGCATCCAGTGGCTCAGGGTGGGGATCCAGCCGGCCCAGTCGCGGCGATTGCAGCGCTGGCCAACGGTACGCTCTATCAGTTGAGGGTTAGCGCTGACCTCGCTGAAGCCCTCACGGCCTGCCCACTCCAGCAAACCATGGAGGAAG   <  8:169219/149‑1                                                         CTGCATCCAGTGGCTCAGGGTGGGGATCCAGCCGGCCCAGTCGCGGCGATTGCAGCGCTGGCCAACGGTACGCTCTATCAGTTGAGGGTTAGCGCTGACCTCGCTGAAGCCCTCACGGCCTGCCCACTCCAGCCAACCATGGAGGAAGG  >  3:86439/1‑149                                                          TGCATCCAGTGGCTCAGGGTGGGGATCCAGCCGGCCCAGTCGCGGCGATTGCAGCGCTGGCCAACGGTACGCTCTATCAGTTGA                                                                  >  5:218998/1‑84                                                          TGCATCCAGTGGCTCAGGGTGGGGATCCAGCCGGCCCAGTCGCGGCGATTGCAGCGCTGGCCAACGGTACGCTCTATCAGTTGA                                                                  <  6:218998/84‑1                                                                                                                                                                                                               TGCAGCGTTTGCTGAGCGAGGCGTTGCCGCTGCCGGGCAGCGACCAGAGCGTAACGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5300684‑5300626 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacgctgCATCCAGTGGCTCAGGGTGGGGATCCAGCCGGCCCAGTCGCGGCGATTGCAGCGCTGGCCAACGGTACGCTCTATCAGTTGAGGGTTAGCGCTGACCTCGCTGAAGCCCTCACGGCCTGCCCACTCCAGCAAACCATGGAGGAAGG  >  NC_002947/5300683‑5300828

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.