| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5365223 | 51 (0.820) | 3 (0.050) | 3/250 | NT | 5.9% | coding (1333/1914 nt) | ftsH | integral membrane ATP‑dependent zinc metallopeptidase |
| ? | NC_002947 | = 5365252 | 48 (0.820) | coding (1304/1914 nt) | ftsH | integral membrane ATP‑dependent zinc metallopeptidase | |||||
GACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5365072‑5365223‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcacgaccCGGTCTACAAGGTTTCGATCATCCCGCGTGGTCGTGCCTTGGGTGTGACCATGTTCCTGCCGGAAGAAGACCGCTACAGCCTCTCCAAGCGTGCGCTGATCAGCCAGATCTGCTCGCTGTATGGCGGCCGTATCGCCGAGGAGATG < NC_002947/5365252‑5365107 GACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACG > 5:17032/1‑149GACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCAC > 6:258553/1‑148 ACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGA > 2:265761/1‑149 ACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGA < 3:232884/149‑1 CGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGAC > 4:6176/1‑149 GCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCCGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGAC > 4:333378/1‑148 CAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCAC < 3:277431/141‑1 CAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCAC > 4:277431/1‑141 CTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCCGGTCTACAAGGTTTCGATCATCCCGCGTGGTCGTGC < 1:265761/148‑1 TTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCCGGTCTACAAGGTTTCGATCATCCCGCGTGGTCGTGCCTTG > 1:307368/1‑80 TTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCCGGTCTACAAGGTTTCGATCATCCCGCGTGGTCGTGCCTTG < 2:307368/80‑1 CACGACCCGGTCTACAAGGTTTCGATCATCCCGCGTGGTCGTGCCTTGGGTGTGACCATGTTCCTGCCGGAAGAAGACCGCTACAGCCTCTCCAAGCGTGCGCTGATCAGCCAGATCTGCTCGCTGTATGGCGGCCGTATCGCCGAGGA < 7:279256/149‑1 ACGACCCGGTCTACAAGGTTTCGATCATCCCGCGTGGTCGTGCCTTGGGTGTGACCATGTTCCTGCCGGAAGAAGACCGCTACAGCCTCTCCAAGCGTGCGCTGATCAGCCAGATCTGCTCGCTGTATGGCGGCCGTATCGCCGAGGA < 1:37109/148‑1 GACCCGGTCTACAAGGTTTCGATCATCCCGCGTGGTCGTGCCTTGGGTCTGACCATGTTCCTGCCGGAAGAAGACCGCTACAGCCTCTCCAAGCGTCCGCTGATCAGCCAGATCTGCTCGCTGTATGGCGGCCGTATCGCCGAGGAGAT > 3:210687/1‑149 ACCCGGTCTACAAGGTTTCGATCATCCCGCGTGGTCGTGCCTTGGGTGTGACCATGTTCCTGCCGGAAGAAGACCGCTACAGCCTCTCCAAGCGTGCGCTGATCAGCCAGATCTGCTCGCTGTATGGCGGCCGTATCGCCGAGGAGATG < 4:151355/149‑1 ACCCGGTCTACAAGGTTTCGATCATCCCGCGTGGTCGTGCCTTGGGTGTGACCATGTTCCTGCCGGAAGAAGACCGCTACAGCCTCTCCAAGCGTGCGCTGATCAGCCAGATCTGCTCGCTGTATGGCGGCCGTATCGCCGAGGAGATG < 4:157176/149‑1 GACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5365072‑5365223‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcacgaccCGGTCTACAAGGTTTCGATCATCCCGCGTGGTCGTGCCTTGGGTGTGACCATGTTCCTGCCGGAAGAAGACCGCTACAGCCTCTCCAAGCGTGCGCTGATCAGCCAGATCTGCTCGCTGTATGGCGGCCGTATCGCCGAGGAGATG < NC_002947/5365252‑5365107 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |