New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5365223	51 (0.820)	3 (0.050)	3/250	NT	5.9%	coding (1333/1914 nt)	ftsH	integral membrane ATP‑dependent zinc metallopeptidase
	?	NC_002947	= 5365252	48 (0.820)					coding (1304/1914 nt)	ftsH	integral membrane ATP‑dependent zinc metallopeptidase

CATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGACCATGGTCTTGCGCTCGGCGCCCATCATGATCTTGTCCTTGGCCAGCTCGAACTCTTTCATTT  >  NC_002947/5365107‑5365399                                                                                                                                                  |                                                                                                                                                    cATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGggt                                                                                                                                                  <  4:157176‑M2/149‑4 (MQ=255) cATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGggt                                                                                                                                                  <  4:151355‑M2/149‑4 (MQ=255)  aTCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGGACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCAGACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGggtc                                                                                                                                                 >  3:210687‑M2/1‑145 (MQ=255)     tcctcGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGggtcgtg                                                                                                                                              <  7:279256‑M2/149‑8 (MQ=255)     tcctcGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGggtcgt                                                                                                                                               <  1:37109‑M2/148‑7 (MQ=255)          ggCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTc                                                                                                                                           <  5:190106/147‑1 (MQ=255)           gCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAgg                                                                                                                                        >  8:71682/1‑149 (MQ=255)           gCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAgg                                                                                                                                        <  8:279256/149‑1 (MQ=255)              aTACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACAACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCAc                                                                                                                                     <  1:276489/149‑1 (MQ=255)                       ccATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGcgacc                                                                                                                            >  3:165972/1‑149 (MQ=255)                       ccATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGcgacc                                                                                                                            <  4:161981/149‑1 (MQ=255)                         aTACAGCGAGCAGATCTGGCCGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGcgaccga                                                                                                                          <  3:333378/149‑1 (MQ=255)                                gAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGc                                                                                                                   <  1:278551/149‑1 (MQ=255)                                   cAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTg                                                                                                                <  5:258553/149‑1 (MQ=255)                                           gCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCt                                                                                                        >  7:3983/1‑149 (MQ=255)                                                   gcgcACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAg                                                                                                <  4:165972/149‑1 (MQ=255)                                                          cTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAgtgt                                                                                         <  8:226046/149‑1 (MQ=255)                                                          cTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAgtgt                                                                                         <  8:220250/149‑1 (MQ=255)                                                             ggAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTtc                                                                                      >  5:39328/1‑149 (MQ=255)                                                                gagGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACGGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTctct                                                                                   >  5:329019/1‑149 (MQ=255)                                                                gagGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGa                                                                                                   >  1:175210/1‑133 (MQ=255)                                                                  ggCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGCCACGACCTCGCGGGAGGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTATCTcttt                                                                                 <  6:348151/149‑1 (MQ=255)                                                                    cTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTcttttc                                                                               <  3:6176/149‑1 (MQ=255)                                                                          cGGTCTTCTTCCGGCAGGAACATGGTCTCACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGCTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTcttttccttttc                                                                         <  8:277270/149‑1 (MQ=255)                                                                          cGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGTCGTGGACAGCCTCGTGATAGGCAGTGTTTCTcttttccttttc                                                                         >  3:240711/1‑149 (MQ=255)                                                                          cGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTcttttccttttc                                                                         >  8:59639/1‑149 (MQ=255)                                                                           ggTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCg                                                                        >  7:319530/1‑149 (MQ=255)                                                                            gTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCg                                                                        >  1:7010/1‑148 (MQ=255)                                                                              cttcttCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCgta                                                                      >  4:57727/1‑146 (MQ=255)                                                                               ttcttcCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACa                                                                    >  2:294947/1‑149 (MQ=255)                                                                                  ttcCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGa                                                                 >  3:210540/1‑149 (MQ=255)                                                                                          gttaCATTGTCACAACCAATGCACGACCACGGGGGATTTTCGAAACCTTGTAGACCGGGTCGTGCTGAGGCACCAGGCGACCGACAATCGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGACCATGGTc                                                         <  2:162320/146‑1 (MQ=255)                                                                                                 ggTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGACCATGGTCTTGCGCt                                                  >  2:139351/1‑149 (MQ=255)                                                                                                  gTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGACCATGGTCTTGCGCTc                                                 >  8:216823/1‑149 (MQ=255)                                                                                                   tCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGACCATGGTCTTGCGCTCg                                                <  6:39328/149‑1 (MQ=255)                                                                                                    cacaCCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGACCATGGTCTTGCGCTCgg                                               >  8:31018/1‑149 (MQ=255)                                                                                                      ctcccAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGACCATGGTCTTGCGCTCgg                                               <  1:139351/145‑1 (MQ=255)                                                                                                         ccAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGACCATGGTCTTGCGCTCGGCGcc                                           >  6:337061/1‑148 (MQ=255)                                                                                                          cAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGggtcgtgccttgggtgtgaccatgttcctgccggaagaa                                                                                                              >  1:307368‑M2/1‑41 (MQ=255)                                                                                                          cAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGggtcgtgccttgggtgtgaccatgttcctgccggaagaa                                                                                                              <  2:307368‑M2/80‑40 (MQ=255)                                                                                                          cAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGACCATGGTCTTGCGCTCGGCGCCca                                         >  7:173001/1‑149 (MQ=255)                                                                                                           aaGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGACCATGGTCTTGCGCTCGGCGCCcat                                        >  7:52729/1‑149 (MQ=255)                                                                                                            aGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGACCATGGTCTTGCGCTCGGCGCCcatc                                       <  2:37109/149‑1 (MQ=255)                                                                                                              gCACGACCACGCGGGATGATCGAAACCTTGTAGACCGggtcgtgccttgggtgtgaccatgttcctgccggaagaagaccgctacagcctctccaagcgtgcgctgatcagccagatctgctcgctgtatggcggccgtatcgccgag                                      <  1:265761‑M2/148‑112 (MQ=255)                                                                                                              gCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGACCATGGTCTTGCGCTCGGCGCCcaaaat                                     >  1:138592/1‑145 (MQ=255)                                                                                                                    ccACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGACCATGGTCTTGCGCTCGGCGCCCATCATGATCtt                               >  5:165296/1‑149 (MQ=255)                                                                                                                          gggAGGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGACCATGGTCTTGCGCTCGCCGCCCATCATGATCTTGTCCtt                         <  7:59639/149‑1 (MQ=255)                                                                                                                           ggATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGACCATGGTCTTGCGCTCGGCGCCCATCATGATCTTGTCCTTg                        <  5:337061/149‑1 (MQ=255)                                                                                                                             atgatCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGACCATGGTCTTGCGCTCGGCGCCCATCATGATCTTGTCCTTGGc                      <  3:151355/149‑1 (MQ=255)                                                                                                                             atgatCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGACCATGGTCTTGCGCTCGGCGCCCATCATGATCTTGTCCTTGGc                      <  3:157176/149‑1 (MQ=255)                                                                                                                               gatCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGACCATGGTCTTGCGCTCGGCGCCCATCATGATCTTGTCCTTGGc                      >  1:18678/1‑147 (MQ=255)                                                                                                                                 tCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGACCATGGTCTTGCGCTCGGCGCCCATCATGATCTTGTCGTTGGCCAGc                  >  2:216507/1‑149 (MQ=255)                                                                                                                                  cGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGACCATGGTCTTGCGGTCGGCGCCCATCAGTATGTTGTCCTTGGCCAGCt                 >  4:130116/1‑149 (MQ=255)                                                                                                                                    aaaCCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGACCATGGTCTTGCGCTCGGCGCCCATCATGATCTTGTCCTTGGCCAGCTc                >  7:284274/1‑148 (MQ=255)                                                                                                                                    aaaCCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGACCATGGTCTTGCGCTCGGCGCCCATCATGATCTTGTCCTTGGCCAGCTc                >  6:229052/1‑148 (MQ=255)                                                                                                                                     aaCCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGACCATGGTCTTGCGCTCGGCGCCCATCATGATCTTGTCCTTGGCCAGCTCGa              <  8:3983/149‑1 (MQ=255)                                                                                                                                      aCCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGACCATGGTCTTGCGCTCGGCGCCCATCATGATCTTGTCCTTGGCCAGCTCGaa             <  7:71682/149‑1 (MQ=255)                                                                                                                                       ccTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGACCATGGTCTTGCGCTCGGCGCCCATCATGATCTTGTCCTTGGCCAGCTCGAAc            <  5:229052/149‑1 (MQ=255)                                                                                                                                           gTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGACCATGGTCTTGCGCTCGGCGCCCATCATGATCTTGTCCTTGGCCAGCTCGAActct         <  6:17032/148‑1 (MQ=255)                                                                                                                                              gACCGTGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGACCATGGTCTTGCGCTCGGCGCCCATCATGATCTTGTCCTTGGCCAGCTCGAACTCTTTCa     <  8:319530/149‑1 (MQ=255)                                                                                                                                              gACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGACCATGGTCTTGCGCTCGGCGCCCATCATGATCTTGTCCTTGGCCAGCTCGAACTCTTTCa     >  3:249300/1‑149 (MQ=255)                                                                                                                                                 cGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGACCATGGTCTTGCGCTCGGCGCCCATCATGATCTTGTCCTTGGCCAGCTCGAACTCTTTCAttt  <  8:52729/149‑1 (MQ=255)                                                                                                                                                 cGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGACCATGGTCTTGCGCTCGGCGCCCATCATGATCTTGTCCTTGGCCAGCTCGAACTCTTTCAttt  >  4:54963/1‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                    CATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGGATGATCGAAACCTTGTAGACCGGGTCGTGCTCAGGCACCAGGCGACCGACAATGGCGTGGCCAGCCTCGTGATAGGCAGTGTTTCTCTTTTCCTTTTCGGACATGACCATGGTCTTGCGCTCGGCGCCCATCATGATCTTGTCCTTGGCCAGCTCGAACTCTTTCATTT  >  NC_002947/5365107‑5365399

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.