New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 6152840 | 62 (1.000) | 9 (0.150) | 8/250 | NT | 13.6% | coding (421/489 nt) | PP_5738 | hypothetical protein |
? | NC_002947 | = 6152866 | 56 (0.960) | coding (447/489 nt) | PP_5738 | hypothetical protein |
TCGTCGACTCTCACCCGGTTACGATCGAAACATTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6152685‑6152840 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccggtcCAGCTCACTTGCCTTCGGCAACGGGCGACCGGCAGGATTTGCCTTGATTCGATCGGAAAGTGTCTGCCCATCCGCATAGAGGCACACAATTACGTCTGGCGCGAGGTCATGCAACTGCGCTTTTGCAAATGGCGTCACCCTGAAA < NC_002947/6152866‑6152722 TCGTCGACTCTCACCCGGTTACGATCGAAACATTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCT > 8:95687/1‑149 GTCGACTCTCACCCGGTTACGATCGAAACATTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTGATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTG < 4:105876/148‑1 TCGACTCTCACCCGGTTACGATCGAAACATTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCC < 5:302721/149‑1 GACTCTCACCCGGTTACGATCGAAACATTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGG > 8:346499/1‑149 CTCTCACCCGGTTACGATCGAAACATTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTC < 8:225488/149‑1 ATTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTCCAGCTCACTTGCCTTCGGCAACGG < 5:231510/149‑1 GGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAAACCTGCCGGTCCAGAAAACTTGCATTCGGAAACGGGCGA > 7:238771/1‑149 tGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCTCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTCCAGCTCACTTGCCTTCGGCAACGGGCGACCGGCAG < 2:315622/148‑1 ttaagaCATTTGCAAAAGCGCAGTTGCATGACCTCGAGCCAGACGTAATTGGGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTCCAGCTCACTTGCCTTCGGCAACGGGCGACCGGCAGGA < 7:89734/142‑1 AAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTCCAGCTCACTTGCCTTCGGCAACGGGCGACCGGCA > 2:381779/1‑132 AAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTCCAGCTCACTTGCCTTCGGCAACGGGCGACCGGCA < 1:381779/132‑1 atCGCATTTGCATGACCTCGCGCTAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTCCAGCTCACTTGCCTTCGGCAACGGGCGACCGGCAGGATTTGCCTTGATTCGATC < 8:238771/147‑1 ATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTCCAGCTGACTTGCCTTCGGCAACGGGCGACCGGCA < 1:221065/118‑1 ATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTCCAGCTCACTTGCCTTCGGCAACGGGCGACCGGCA > 2:221065/1‑118 CCGGTCCAGCTCACTTGCCTTCGGCAACGGGCGACCGGCAGGATTAGCCTTGATTCGATCGGAAAGTGTCTGCCCATCCGCATAGAGGCACACAATTACGTCTGGCGCGAGGTCATGCAACTGCGCTTTTGCAAATGGCGTCACCCTG > 1:274139/1‑148 GGTCCAGCTCACTTGCCTTCGGCAACGGGCGACCGGCAGGATTTGCCTTGATTCGATCGGAAAGTGTCTGCCCATCCGCATAGAGGCACACAATTACGTCTGGCGCGAGGTCATGCAACTGCGCTTTTGCAAATGGCGTCACCCTGAAA > 8:116048/1‑149 GGTCCAGCTCACTTGCCTTCGGCAACGGGCGACCGGCAGGATTTGCCTTGATTCGATCGGAAAGTGTCTGCCCATCCGCATAGAGGCACACAATTACGTCT > 2:378942/1‑101 GGTCCAGCTCACTTGCCTTCGGCAACGGGCGACCGGCAGGATTTGCCTTGATTCGATCGGAAAGTGTCTGCCCATCCGCATAGAGGCACACAATTACGTCT < 1:378942/101‑1 TCGTCGACTCTCACCCGGTTACGATCGAAACATTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6152685‑6152840 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccggtcCAGCTCACTTGCCTTCGGCAACGGGCGACCGGCAGGATTTGCCTTGATTCGATCGGAAAGTGTCTGCCCATCCGCATAGAGGCACACAATTACGTCTGGCGCGAGGTCATGCAACTGCGCTTTTGCAAATGGCGTCACCCTGAAA < NC_002947/6152866‑6152722 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |