New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6152840	62 (1.000)	9 (0.150)	8/250	NT	13.6%	coding (421/489 nt)	PP_5738	hypothetical protein
	?	NC_002947	= 6152866	56 (0.960)					coding (447/489 nt)	PP_5738	hypothetical protein

CTCTCACCCGGTTACGATCGAAACATTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGGCAGCAGTTGCCCGATCTCACTGGCC  >  NC_002947/6152692‑6152987                                                                                                                                                      |                                                                                                                                                    ctctCACCCGGTTACGATCGAAACATTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTC                                                                                                                                                     <  8:225488‑M1/149‑1 (MQ=255)  tctcACCCGGTTACGATCGAAACATTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCTCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCg                                                                                                                                                    >  1:92196/1‑149 (MQ=255)  tctcACCCGGTTACGATCGAAACATTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCg                                                                                                                                                    >  1:339338/1‑149 (MQ=255)    tcACCCGGTTACGATCGAAACATTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGcc                                                                                                                                                  >  3:183766/1‑149 (MQ=255)        ccGGTTACGATCGAAACATTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGtt                                                                                                                                              <  6:139811/149‑1 (MQ=255)           gTTACGATCGAAACATTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAACGGCAAATCCTGCCGGTCGCCCGTTGc                                                                                                                                            <  1:201595/149‑1 (MQ=255)           gTTACGATCGAAACATTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGcc                                                                                                                                           <  4:183766/149‑1 (MQ=255)               cGATCGAAACATTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACTCTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGaa                                                                                                                                        <  3:223581/148‑1 (MQ=255)                 aTCGAAACATTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGc                                                                                                                                     <  3:48969/149‑1 (MQ=255)                    gAAACATTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCaa                                                                                                                                   <  8:2991/148‑1 (MQ=255)                     aaaCATTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGt                                                                                                                                 <  2:339338/149‑1 (MQ=255)                     aaaCATTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGt                                                                                                                                 <  5:222846/149‑1 (MQ=255)                     aaaCATTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGt                                                                                                                                 >  6:354724/1‑149 (MQ=255)                     aaaCATTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGt                                                                                                                                 <  7:346499/149‑1 (MQ=255)                     aaaCATTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGt                                                                                                                                 <  1:206086/149‑1 (MQ=255)                         aTTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCcagctcacttgccttcggcaacgg                                                                                                                             <  5:231510‑M1/149‑25 (MQ=255)                         aTTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGc                                                                                                                             >  1:255504/1‑149 (MQ=255)                          ttCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCt                                                                                                                            <  1:196592/149‑1 (MQ=255)                             ggTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAAACCTGCCGGTCcagaaaacttgcattcggaaacgggcga                                                                                                                         >  7:238771‑M1/1‑121 (MQ=255)                               tttCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGgacc                                                                                                                       >  8:116048‑M2/1‑145 (MQ=255)                                  cAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCTAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGgaccgg                                                                                                                     >  1:274139‑M2/1‑142 (MQ=255)                                   aGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTg                                                                                                                           >  8:355282/1‑141 (MQ=255)                                   aGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTg                                                                                                                           <  7:355282/141‑1 (MQ=255)                                    tggtGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCTCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCcagctcacttgccttcggcaacgggcgaccggcag                                                                                                                  <  2:315622‑M1/148‑36 (MQ=255)                                       ttaagacatttgcAAAAGCGCAGTTGCATGACCTCGAGCCAGACGTAATTGGGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCcagctcacttgccttcggcaacgggcgaccggcagga                                                                                                                <  7:89734‑M1/142‑38 (MQ=255)                                          cGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCAcc                                                                                                            <  6:154389/149‑1 (MQ=255)                                           gCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCAccc                                                                                                           >  5:116849/1‑149 (MQ=255)                                             cATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCtt                                                                                                         <  7:95687/149‑1 (MQ=255)                                                 tGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCaa                                                                                                      <  7:143460/148‑1 (MQ=255)                                                    aaaaGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCcagctcacttgccttcggcaacgggcgaccggca                                                                                                                   <  1:381779‑M1/132‑35 (MQ=255)                                                    aaaaGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCcagctcacttgccttcggcaacgggcgaccggca                                                                                                                   >  2:381779‑M1/1‑98 (MQ=255)                                                    aaaaGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGc                                                                                                   >  3:78977/1‑148 (MQ=255)                                                    aaaaGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGc                                                                                                   >  1:212804/1‑148 (MQ=255)                                                    aaaaGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGAGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGc                                                                                                   >  4:11750/1‑148 (MQ=255)                                                       atcgcatTTGCATGACCTCGCGCTAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCcagctcacttgccttcggcaacgggcgaccggcaggatttgccttgattcgatc                                                                                               <  8:238771‑M1/147‑55 (MQ=255)                                                        gcgcAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAAt                                                                                              <  1:103399/149‑1 (MQ=255)                                                         cgcAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATg                                                                                             <  7:95130/149‑1 (MQ=255)                                                          gcAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATgg                                                                                            >  5:391617/1‑149 (MQ=255)                                                              ttGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGAAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTc                                                                                        >  2:143232/1‑149 (MQ=255)                                                                  aTGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCcagctgacttgccttcggcaacgggcgaccggca                                                                                                                   <  1:221065‑M1/118‑35 (MQ=255)                                                                  aTGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCcagctcacttgccttcggcaacgggcgaccggca                                                                                                                   >  2:221065‑M1/1‑84 (MQ=255)                                                                  aTGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAGGGCAAGTGAGCTGGACCGGCATGTCCACCGTCAATGCGAAATGGCCTCGCTg                                                                                    >  4:45078/1‑149 (MQ=255)                                                                       cTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGTCACTTTCCGCTCGAATCAA‑GTCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGCGCTGGACCGGCATGTCCCCCTTCAATGCGAAATGGCGTCGCTgtagt                                                                                >  8:184725/1‑148 (MQ=255)                                                                        tCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTgtagt                                                                                >  6:17337/1‑147 (MQ=255)                                                                            gcCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GTCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCGGTAGTAAGCGt                                                                          >  6:386526/1‑149 (MQ=255)                                                                            gcCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCAt                                                                                                                  >  1:337718/1‑109 (MQ=255)                                                                            gcCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCAt                                                                                                                  <  2:337718/109‑1 (MQ=255)                                                                              cAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTcc                                                                        <  6:391617/149‑1 (MQ=255)                                                                               aGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGgacc                                                                                                                       >  2:378942‑M2/1‑97 (MQ=255)                                                                               aGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGgacc                                                                                                                       <  1:378942‑M2/101‑5 (MQ=255)                                                                                gACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGc                                                                      >  6:343675/1‑149 (MQ=255)                                                                                gACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTATCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTct                                                                                                              >  4:176476/1‑108 (MQ=255)                                                                                               ctctATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCg                                                       <  2:212804/149‑1 (MQ=255)                                                                                               ctctATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCg                                                       >  4:112589/1‑149 (MQ=255)                                                                                                tctATGCGGATGGGCAGACACTTTCCGATCCAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCg                                                       >  1:35530/1‑148 (MQ=255)                                                                                                   aTGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAAt                                                                                                     <  1:217308/99‑1 (MQ=255)                                                                                                   aTGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAAt                                                                                                     >  2:217308/1‑99 (MQ=255)                                                                                                    tGCGTATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTAGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTaa                                                    <  6:101276/147‑1 (MQ=255)                                                                                                        gATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAgg                                              >  1:385636/1‑149 (MQ=255)                                                                                                             gCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCtt                                                          >  8:147775/1‑132 (MQ=255)                                                                                                             gCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCtt                                                          <  7:147775/132‑1 (MQ=255)                                                                                                             gCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGa                                          >  5:253961/1‑148 (MQ=255)                                                                                                              cAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATa                                        <  5:17337/149‑1 (MQ=255)                                                                                                              cAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGGCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATa                                        <  2:255504/149‑1 (MQ=255)                                                                                                                         cGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGc                             >  4:133068/1‑149 (MQ=255)                                                                                                                          gATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGgaccggcaggatttgccttgattcgatcggaaagtgtctgcccatccgcatagaggcacacaattacgtctagcgcgaggtcatgcaaatgcgat                            <  8:238771‑M2/149‑96 (MQ=255)                                                                                                                          gATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCg                            >  1:263636/1‑149 (MQ=255)                                                                                                                           aTCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGACACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCgg                           <  5:354724/149‑1 (MQ=255)                                                                                                                              gAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTATTAAGCGTCCGCCCAACTCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGgca                         <  8:320324/148‑1 (MQ=255)                                                                                                                               attCAA‑GGCAAATCCTGCCGGTCGCGCGTTGCCGAAGGCAAGTGAGCTGGACATGCATGTCACCCTTCAATCCGAAATGGCCTCGCTGTAGTAAGCGTCCTCCCAACGCACCTTGCGTAAGTCAGTCCGATACCCACTGATGc                             <  6:312056/141‑1 (MQ=37)                                                                                                                               aaTCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGgcag                        >  1:143836/1‑148 (MQ=255)                                                                                                                               aaTCAA‑AGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGATGGACCGCCATGTCACCCTTCAATGCGAAATGGCCTCGCTCTAGTAAGCGTCCGCCCAACGCACCTAGCGTAAGTCAGGCCGATACCCACTGATGc                             >  5:312056/1‑143 (MQ=38)                                                                                                                                    a‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGGCAGCAGTTg                  >  6:2056/1‑149 (MQ=255)                                                                                                                                    a‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGGCAGCAGTTg                  >  2:334534/1‑149 (MQ=255)                                                                                                                                    a‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGGCAGCAGTTg                  >  3:353263/1‑149 (MQ=255)                                                                                                                                       gCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTcc                                                                        <  3:76645/93‑1 (MQ=255)                                                                                                                                       gCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTcc                                                                        >  4:76645/1‑93 (MQ=255)                                                                                                                                        cAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGGCAGCAGTTGccc               <  1:143232/149‑1 (MQ=255)                                                                                                                                            tCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGgaccggcaggatttgccttgattcgatcggaaagtgtctgcccatccgcatagaggcacccaattacgtctggctcgaggtcatgcaactgcgcttttgcaaatgtcttaa            <  7:89734‑M2/148‑112 (MQ=255)                                                                                                                                              cTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGgaccggcaggatttgccttgattcgatcggaaagtgtctgcccatccgcatagaggcacacaattacgtctggagcgaggtcatgcaactgcgcttttgcaaatggcgtcacca         <  2:315622‑M2/149‑115 (MQ=255)                                                                                                                                               tGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGgaccggcaggatttgccttgattcgatcggaaagtgtctgcccatccgcatagaggcacacaattacgtctggcgcgaggtcatgcaactgcgctttt                         >  2:381779‑M2/1‑34 (MQ=255)                                                                                                                                               tGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGgaccggcaggatttgccttgattcgatcggaaagtgtctgcccatccgcatagaggcacacaattacgtctggcgcgaggtcatgcaactgcgctttt                         <  1:381779‑M2/132‑99 (MQ=255)                                                                                                                                               tGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGgaccggcaggatttgccttgattcgatcggaaagtgtctgcccatccgcatagaggcacacaattacgtctggcgcgaggtcat                                       >  2:221065‑M2/1‑34 (MQ=255)                                                                                                                                               tGCCGGTCGCCCGTTGCCGAAGGCAAGTCAGCTGgaccggcaggatttgccttgattcgatcggaaagtgtctgcccatccgcatagaggcacacaattacgtctggcgcgaggtcat                                       <  1:221065‑M2/118‑85 (MQ=255)                                                                                                                                                gCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGGCAGCAGTTGCCCGATCTCAc       >  3:360589/1‑149 (MQ=255)                                                                                                                                                gCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGGCAGCAGTTGCCCGATCTCAc       <  2:143836/149‑1 (MQ=255)                                                                                                                                                 ccGGTCcagctcacttgccttcggcaacgggcgaccggcaggattagccttgattcgatcggaaagtgtctgcccatccgcatagaggcacacaattacgtctggcgcgaggtcatgcaactgcgcttttgcaaatggcgtcaccctg       >  1:274139‑M1/1‑6 (MQ=255)                                                                                                                                                   ggTCcagctcacttgccttcggcaacgggcgaccggcaggatttgccttgattcgatcggaaagtgtctgcccatccgcatagaggcacacaattacgtctggcgcgaggtcatgcaactgcgcttttgcaaatggcgtcaccctgaaa    >  8:116048‑M1/1‑4 (MQ=255)                                                                                                                                                   ggTCcagctcacttgccttcggcaacgggcgaccggcaggatttgccttgattcgatcggaaagtgtctgcccatccgcatagaggcacacaattacgtct                                                    >  2:378942‑M1/1‑4 (MQ=255)                                                                                                                                                   ggTCcagctcacttgccttcggcaacgggcgaccggcaggatttgccttgattcgatcggaaagtgtctgcccatccgcatagaggcacacaattacgtct                                                    <  1:378942‑M1/101‑98 (MQ=255)                                                                                                                                                     tCGCCCGTTTCCGAATGCAAGTTTTCTGgaccggcaggttttgccttgattcgatcggaaagtgtctgcccatccgcatagaggcacacaattacgtctggcgcgaggtcatgcaactgcgcttttgcaaatggcgtcaccctgaaacc  >  7:238771‑M2/1‑28 (MQ=255)                                                                                                                                                      |                                                                                                                                                    CTCTCACCCGGTTACGATCGAAACATTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAA‑GGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGGCAGCAGTTGCCCGATCTCACTGGCC  >  NC_002947/6152692‑6152987

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.