New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	394324 =	44 (0.710)	3 (0.050)	3/256	NT	7.0%	intergenic (+7/‑295)	purU‑I/fdhA	formyltetrahydrofolate deformylase/formaldehyde dehydrogenase
	?	NC_002947	394364 =	37 (0.620)					intergenic (+47/‑255)	purU‑I/fdhA	formyltetrahydrofolate deformylase/formaldehyde dehydrogenase

GAGGTGGTGGACCACAGTCACTATCCCGAAGACCTGATTGCCAAAGGGCGGGATATCGAATGCCTGACATTGGCGCGGGCGGTGGGGTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGCGACACCCCTGCC  >  NC_002947/394177‑394472                                                                                                                                                    |                                                                                                                                                     gAGGTGGTGGACCACAGTCACTATCCCGAAGACCTGATTGCCAAAGGGCGGGATATCGAATGCCTGACATTGGCGCGGGCGGTGGGGTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCgg                                                                                                                                                      >  6:3364/1‑148 (MQ=255)   gcactgactgggagcgacagagagatgccttttaacggcaggggtgtcgctggggagtatgggcaaacagagaggcggcctgtgcgggcctcttcgcggctaaagccgctcttacgggggaccgcaccaacccgagggctgtgctGTAc                                                                                                                                                   <  5:139203‑M1/4‑1 (MQ=255)    cactgactgggagcgacagagagatgccttttaacggcaggggtgtcgctggggagtatgggcaaacagagaggcggcctgtgcgggcctcttcgcggctaaagccgctcttacgggggaccgcaccaacccgagggctgtgctGTAc                                                                                                                                                   >  8:45314‑M1/145‑148 (MQ=255)    cactgactgggagcgacagagagatgccttttaacggcaggggtgtcgctggggagtatgggcaaacagagaggcggcctgtgcgggcctcttcgcggctaaagccgctcttacgggggaccgcaccaacccgagggctgtgctGTAc                                                                                                                                                   >  2:20603‑M1/145‑148 (MQ=255)     actgactgggagcgacagagagatgccttttaacggcaggggtgtcgctggggagtatgggcaaacagagaggcggcctgtgcgggcctcttcgcggcaaaagccgcgggtaaggggggccgccccaacccgagggcggtgctGTACCg                                                                                                                                                 <  2:10599‑M1/6‑1 (MQ=255)            ccACAGTCACTATCCCGAAGACCTGATTGCCAAAGGGCGGGATATCGAATGCCTGACATTGGCGGGGGCGTTGGGGTATCACATCGCGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCtt                                                                                                                                          >  5:335844/1‑149 (MQ=255)             cacaGTCACTATCCCGAACACCTGATTGCCAACGGGCGGGAAATCGACTGCCGGACATTGGCGCGGGCGGTGGGGAATCACATCCCCCGACGGGTGTTCCTGAACGCCAACCGCACTGTCGTGCTGTAATAACCGGTACCGGCCTCTTc                                                                                                                                         <  2:22364/149‑1 (MQ=255)               caGTCACTATCCCGAAGACCTGATTGCCAAAGGGCGGGATATCGAATGCCTGACATTGGCGCGGGCGGTGGGGTATCACATCGAGCGACGGGTGTTCCTGAGCGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTcgc                                                                                                                                       >  8:157561/1‑149 (MQ=255)               caGTCACTATCCCGAAGACCTGATTGCCAAAGGGCGGGATATCGAATGCCTGACATTGGCGCGGGCGGTGGGGTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTcgc                                                                                                                                       <  5:3364/149‑1 (MQ=255)                aggcACTCTCCCGACGACCTGCATGCCCAAGGGCGGGACATCGAATGCCTGACTTGGGCGCGGGCGGGGGGGTATCACATCGAGCGACGGGGGGTCCTGCACGCCAACCGGACTGTCCTTCTGTACTAACCGGTACCGGCCTCTCcgcg                                                                                                                                      <  6:386924/146‑1 (MQ=255)                    aCTATCCCGAAGACCTGATTGCCAAAGGGCGGGATATCGAATGCCTGACATTGGCGCGGGCGGTGGGGTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCt                                                                                                                                   >  2:84565/1‑148 (MQ=255)                    aCTATCCCGAAGACCTGATTGCCAAAGGGCGGGATATCGAATGCCTGACATTGGCGCGGGCGGTGGGGTATCACATCGAGCGAC‑GGTGGTACTTTAAGGCAACCCGGCGGTCGTTGTGTAATTAACCGTACCGGCCGCTTAGCGGcga                                                                                                                                  >  7:266617/1‑146 (MQ=255)                           cGAAGACCTGATTGCCAAAGGGCGGGATATCGAATGCCTGACATTGGCGCGGGCGGTGGGGTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGc                                                                                                                           <  3:103126/149‑1 (MQ=255)                                  cTGATTGCCAAAGGGCGGGATATCGAATGCCTGACATTGGCGCGGGCGGTGGGGTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTa                                                                                                                      >  2:205662/1‑147 (MQ=255)                                   tGATTGCCAAAGGGCGGGATATCGAATGCCTGACATTGGCGCGGGCGGTGGGGTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTAc                                                                                                                     >  1:117384/1‑147 (MQ=255)                                   tGATTGCCAAAGGGCGGGATATCGAATGCCTGACATTGGCGCGGGCGGTGGGGTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTAc                                                                                                                     <  2:117384/147‑1 (MQ=255)                                     gatGCCAAAGGGCGGGATATCGAATGCCTGACATTGGCGCGGGCGGTGGGGTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTAc                                                                                                                     <  2:137675/143‑1 (MQ=255)                                     aTTGCCAAAGGGCGGGATATCGAATGCCTGACATTGGCGCGGGCGGTGGGGTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACaag                                                                                                                  >  1:137675/1‑146 (MQ=255)                                          cAAAGGGCGGGATATCGAATGCCTGACATTGGCGCGGGCGGTGGGGTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTTGCGGCTAAAGCCGCTCCTACAGGTacag                                                                                                             >  6:297081/1‑148 (MQ=255)                                          cAAAGGGCGGGATATCGAATGCCTGACATTGGCGCGGGCGGTGGGGTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGGCGCTCCTGCAGGTacagg                                                                                                            >  5:182646/1‑148 (MQ=255)                                          cAAAGGGCGGGATATCGAATGCCTGACATTGGCGCGGGCGGTGGGGTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTacag                                                                                                             >  6:139203/1‑148 (MQ=255)                                          cAAAGGGCGGGATATCGAATGCCTGACATTGGCGCGGGCGGTGGGGTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTacag                                                                                                             >  4:300760/1‑148 (MQ=255)                                            gggtggcgctggggagtatgggcaaacagagaggcggcctgtgcgggcctcttcgcggctaaagccgctcttacgggggaccgcaccaacccgagggctgtgctGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTacagca                                                                                                           >  6:357402‑M1/105‑148 (MQ=255)                                                           aaTGCCTGACATTGGCGCGGGCGGTGGGGTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGt                                                                                           >  3:39022/1‑149 (MQ=255)                                                                cTGACATTGGCGCGGGCGGTGGGGTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGt                                                                                      >  3:142193/1‑149 (MQ=255)                                                                 tGACATTGGCGCGGGCGGTGGGGTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGta                                                                                     >  1:139395/1‑148 (MQ=255)                                                                 gcaaacagagaggcggcctgtgcgggcctcttcgcggctaaagccgctcttacgggggaccgcaccaacccgagggctgtgctGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTacagcaca                                                                                                         <  4:59703‑M1/46‑1 (MQ=255)                                                                 gcaaacagagaggcggcctgtgcgggcctcttcgcggctaaagccgctcttacgggggaccgcaccaacccgagggctgtgctGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTacagcaca                                                                                                         >  3:59703‑M1/84‑129 (MQ=255)                                                                         gcgcGGGCGGTGGGGTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTaa                                                                             <  1:84565/149‑1 (MQ=255)                                                                           gcgggcggTGGGGTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTaa                                                                             >  4:117620/1‑147 (MQ=255)                                                                           gccggcggcGGGGTATCACAGCGCGCGACGGGCGCTCCTGCACGCCAACCCGACTGGCGCTCTGTAATACCCCGTACCGGCCTCTTCGCGGCTAACCCCGCGCCTACCGGTACAGCACAGCCCTCGCGTTCGTGCGGTCCCCCGTCaga                                                                           <  6:335844/146‑1 (MQ=255)                                                                                    ggggTATCACATCGAGCGACGGTTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCtt                                                                    >  6:208380/1‑147 (MQ=255)                                                                                      ggTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGc                                                                <  1:376170/149‑1 (MQ=255)                                                                                          tCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCcgc                                                             >  8:82723/1‑148 (MQ=255)                                                                                            acaTCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTATCCGCGaa                                                          >  4:96085/1‑149 (MQ=255)                                                                                              aTCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTccc                                                                                   <  8:250924/122‑1 (MQ=255)                                                                                              aTCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTccc                                                                                   >  7:250924/1‑122 (MQ=255)                                                                                               tCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAagag                                                       <  7:157561/149‑1 (MQ=255)                                                                                                    cGACGGGTGTTCCTCAACGCCAACCGGACTGTCGTTCTGTAAAAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGAACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAATAGCGGCTTTAGCCGCGAAGAGGCCCg                                                  <  1:9061/149‑1 (MQ=255)                                                                                                     gACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCCCAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGcc                                                    >  2:317152/1‑146 (MQ=255)                                                                                                     gACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGcc                                                    <  1:317152/146‑1 (MQ=255)                                                                                                      aCGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGca                                                <  3:300760/149‑1 (MQ=255)                                                                                                        gggTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGca                                                >  4:152242/1‑147 (MQ=255)                                                                                                               ccTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGgccgcc                                       >  1:92641/1‑149 (MQ=255)                                                                                                                 tGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTacagcacag                                                                                                        <  7:297317/82‑1 (MQ=255)                                                                                                                 tGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTacagcacag                                                                                                        >  8:297317/1‑82 (MQ=255)                                                                                                                 tGAACGCCAACCGGACTGTCGTTCTGGAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCctc                                     >  1:10599/1‑149 (MQ=255)                                                                                                                    aCGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCctctc                                   <  5:208380/148‑1 (MQ=255)                                                                                                                        cAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGttt                              >  8:50846/1‑149 (MQ=255)                                                                                                                        cAACCGGACTGTCGTTCTATAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCACCTAAAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAATAACGGCTTATTCCGCCAAGATGCCAGCACACGCCGCCTCTCTGttt                              >  7:31886/1‑149 (MQ=255)                                                                                                                                        cTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCATCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGc              >  6:881/1‑149 (MQ=255)                                                                                                                                            aatacCCGGTACCGGCCGCTTCGCGGTTAAAGCCGATCCTACAGGTACACCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGTGCGGCTTAAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGCGac           <  7:82723/148‑1 (MQ=255)                                                                                                                                             ataccgggTACCGGCGTCTTCGGGGATAATGCCGATCCTACTGTTACATCACTGCCGTGGGGTTGTTGGGGTCCCCGGTATGAGCGGGTTTTGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGCGacac         <  8:31886/143‑1 (MQ=255)                                                                                                                                                   ggTACCGGCCTCTTCGCGGATAACGCGGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCGGAAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGCGACACCCCTGc   <  2:139395/149‑1 (MQ=255)                                                                                                                                                    GTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACCGCCCTGGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGCGACACCCCTGcc  >  4:142193‑M1/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                     GAGGTGGTGGACCACAGTCACTATCCCGAAGACCTGATTGCCAAAGGGCGGGATATCGAATGCCTGACATTGGCGCGGGCGGTGGGGTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGCGACACCCCTGCC  >  NC_002947/394177‑394472

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.