New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	394324 =	44 (0.710)	3 (0.050)	3/256	NT	7.0%	intergenic (+7/‑295)	purU‑I/fdhA	formyltetrahydrofolate deformylase/formaldehyde dehydrogenase
	?	NC_002947	394364 =	37 (0.620)					intergenic (+47/‑255)	purU‑I/fdhA	formyltetrahydrofolate deformylase/formaldehyde dehydrogenase

CAAAGGGCGGGATATCGAATGCCTGACATTGGCGCGGGCGGTGGGGTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGCGACACCCCTGCCGTTAAAAGGCATCTCTCTGTCGCTCCCAGTCAGTGC  >  NC_002947/394218‑394508                                                                                                                                                   |                                                                                                                                                 cAAAGGGCGGGATATCGAATGCCTGACATTGGCGCGGGCGGTGGGGTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTTGCGGCTAAAGCCGCTCCTACAGGTacag                                                                                                                                                 >  6:297081/1‑148 (MQ=255) cAAAGGGCGGGATATCGAATGCCTGACATTGGCGCGGGCGGTGGGGTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGGCGCTCCTGCAGGTacagg                                                                                                                                                >  5:182646/1‑148 (MQ=255) cAAAGGGCGGGATATCGAATGCCTGACATTGGCGCGGGCGGTGGGGTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTacag                                                                                                                                                 >  6:139203/1‑148 (MQ=255) cAAAGGGCGGGATATCGAATGCCTGACATTGGCGCGGGCGGTGGGGTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTacag                                                                                                                                                 >  4:300760/1‑148 (MQ=255)   gggtggcgctggggagtatgggcaaacagagaggcggcctgtgcgggcctcttcgcggctaaagccgctcttacgggggaccgcaccaacccgagggctgtgctGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTacagca                                                                                                                                               >  6:357402‑M1/105‑148 (MQ=255)                  aaTGCCTGACATTGGCGCGGGCGGTGGGGTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGt                                                                                                                               >  3:39022/1‑149 (MQ=255)                       cTGACATTGGCGCGGGCGGTGGGGTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGt                                                                                                                          >  3:142193/1‑149 (MQ=255)                        tGACATTGGCGCGGGCGGTGGGGTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGta                                                                                                                         >  1:139395/1‑148 (MQ=255)                        gcaaacagagaggcggcctgtgcgggcctcttcgcggctaaagccgctcttacgggggaccgcaccaacccgagggctgtgctGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTacagcaca                                                                                                                                             <  4:59703‑M1/46‑1 (MQ=255)                        gcaaacagagaggcggcctgtgcgggcctcttcgcggctaaagccgctcttacgggggaccgcaccaacccgagggctgtgctGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTacagcaca                                                                                                                                             >  3:59703‑M1/84‑129 (MQ=255)                                gcgcGGGCGGTGGGGTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTaa                                                                                                                 <  1:84565/149‑1 (MQ=255)                                  gcgggcggTGGGGTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTaa                                                                                                                 >  4:117620/1‑147 (MQ=255)                                  gccggcggcGGGGTATCACAGCGCGCGACGGGCGCTCCTGCACGCCAACCCGACTGGCGCTCTGTAATACCCCGTACCGGCCTCTTCGCGGCTAACCCCGCGCCTACCGGTACAGCACAGCCCTCGCGTTCGTGCGGTCCCCCGTCaga                                                                                                               <  6:335844/146‑1 (MQ=255)                                           ggggTATCACATCGAGCGACGGTTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCtt                                                                                                        >  6:208380/1‑147 (MQ=255)                                             ggTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGc                                                                                                    <  1:376170/149‑1 (MQ=255)                                                 tCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCcgc                                                                                                 >  8:82723/1‑148 (MQ=255)                                                   acaTCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTATCCGCGaa                                                                                              >  4:96085/1‑149 (MQ=255)                                                     aTCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTccc                                                                                                                       <  8:250924/122‑1 (MQ=255)                                                     aTCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTccc                                                                                                                       >  7:250924/1‑122 (MQ=255)                                                      tCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAagag                                                                                           <  7:157561/149‑1 (MQ=255)                                                           cGACGGGTGTTCCTCAACGCCAACCGGACTGTCGTTCTGTAAAAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGAACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAATAGCGGCTTTAGCCGCGAAGAGGCCCg                                                                                      <  1:9061/149‑1 (MQ=255)                                                            gACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCCCAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGcc                                                                                        >  2:317152/1‑146 (MQ=255)                                                            gACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGcc                                                                                        <  1:317152/146‑1 (MQ=255)                                                             aCGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGca                                                                                    <  3:300760/149‑1 (MQ=255)                                                               gggTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGca                                                                                    >  4:152242/1‑147 (MQ=255)                                                                      ccTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGgccgcc                                                                           >  1:92641/1‑149 (MQ=255)                                                                        tGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTacagcacag                                                                                                                                            >  8:297317/1‑82 (MQ=255)                                                                        tGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTacagcacag                                                                                                                                            <  7:297317/82‑1 (MQ=255)                                                                        tGAACGCCAACCGGACTGTCGTTCTGGAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCctc                                                                         >  1:10599/1‑149 (MQ=255)                                                                           aCGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCctctc                                                                       <  5:208380/148‑1 (MQ=255)                                                                               cAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGttt                                                                  >  8:50846/1‑149 (MQ=255)                                                                               cAACCGGACTGTCGTTCTATAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCACCTAAAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAATAACGGCTTATTCCGCCAAGATGCCAGCACACGCCGCCTCTCTGttt                                                                  >  7:31886/1‑149 (MQ=255)                                                                                               cTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCATCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGc                                                  >  6:881/1‑149 (MQ=255)                                                                                                   aatacCCGGTACCGGCCGCTTCGCGGTTAAAGCCGATCCTACAGGTACACCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGTGCGGCTTAAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGCGac                                               <  7:82723/148‑1 (MQ=255)                                                                                                    ataccgggTACCGGCGTCTTCGGGGATAATGCCGATCCTACTGTTACATCACTGCCGTGGGGTTGTTGGGGTCCCCGGTATGAGCGGGTTTTGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGCGacac                                             <  8:31886/143‑1 (MQ=255)                                                                                                     tgtgctgtacctgtaggagcggctttagccgcgaagaggccggtacAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGc                                                                >  3:59703‑M2/47‑129 (MQ=255)                                                                                                     tgtgctgtacctgtaggagcggctttagccgcgaagaggccggtacAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGc                                                                <  4:59703‑M2/83‑1 (MQ=255)                                                                                                       tgctgtacctgtaggagcggctttagccgcgaagaggccggtacAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGCGCCAccc                                           >  6:357402‑M2/45‑148 (MQ=255)                                                                                                          ggTACCGGCCTCTTCGCGGATAACGCGGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCGGAAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGCGACACCCCTGc                                       <  2:139395/149‑1 (MQ=255)                                                                                                           GTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACCGCCCTGGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGCGACACCCCTGcc                                      >  4:142193‑M1/1‑149 (MQ=255)                                                                                                             ACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGCGACACCCCTGCCGt                                    <  3:63795‑M1/149‑1 (MQ=255)                                                                                                                  ccTCTTCGCGGCTAACGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGACCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGCGACACCCCTGCCGTTaaaa                               <  4:39022/149‑1 (MQ=255)                                                                                                                  ccTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGCGACACCCCTGCCGTTaaaa                               <  3:117620/149‑1 (MQ=255)                                                                                                                   ctctTTGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGCGACACCCCTGCCGTTAAAAg                              <  5:297081/149‑1 (MQ=255)                                                                                                                      ttCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGCGACACCCCTGCCGTTAAAAGGCa                           >  5:20051/1‑149 (MQ=255)                                                                                                                        cgcgGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGCGACACCCCTGCCGTTAAAAGGCa                           <  3:152242/147‑1 (MQ=255)                                                                                                                             cTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGCGACACCCCTGCCGTTAAAAGGCATctctct                    >  8:154961/1‑149 (MQ=255)                                                                                                                             cTAAAGCCGCTCCTACAGGTACACCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGCGACACCCCTGCCGTTAAAAGGCATctctct                    <  1:205662/149‑1 (MQ=255)                                                                                                                                aaGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGCGACACCCCTGCCGTTAAAAGGCATCTCTCTGt                  <  2:92641/148‑1 (MQ=255)                                                                                                                                         cTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGCGACACCCCTGCCGTTAAAAGGCATCTCTCTGTCGCTCCcagt        >  4:94155/1‑149 (MQ=255)                                                                                                                                           aCAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGCGACACCCCTGCCGTTAAAAGGCATCTCTCTGTCGCTCCcagtca      <  4:63795/149‑1 (MQ=255)                                                                                                                                            cAGGTACAGCACAGCCCTCGGGTTGGTGCGGT‑CCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGCGACACCCCTGCCGTTAAAAGGCATCTCTCTGTCGCTCCcagtcagt    >  1:20327/1‑149 (MQ=255)                                                                                                                                             cggtacAGCACCGCCCTCGGGTTGGGGCGGCCCCCCTTACCCGCGGCTTTTGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGCGACACCCCTGCCGTTAAAAGGCATCTCTCTGTCGCTCCcagtcagt    <  2:10599‑M2/143‑1 (MQ=255)                                                                                                                                             aGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGCGACACCCCTGCCGTTAAAAGGCATCTCTCTGTCGCTCCcagtcagt    <  5:881/149‑1 (MQ=255)                                                                                                                                               gtacAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGCGACACCCCTGCCGTTAAAAGGCATCTCTCTGTCGCTCCCAGTCAGTg   >  2:20603‑M2/5‑148 (MQ=255)                                                                                                                                               gtacAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGCGACACCCCTGCCGTTAAAAGGCATCTCTCTGTCGCTCCCAGTCAGTg   >  8:45314‑M2/5‑148 (MQ=255)                                                                                                                                               gtacAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGCGACACCCCTGCCGTTAAAAGGCATCTCTCTGTCGCTCCCAGTCAGTGc  <  5:139203‑M2/145‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                 CAAAGGGCGGGATATCGAATGCCTGACATTGGCGCGGGCGGTGGGGTATCACATCGAGCGACGGGTGTTCCTGAACGCCAACCGGACTGTCGTTCTGTAATAACCGGTACCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTACAGCACAGCCCTCGGGTTGGTGCGGTCCCCCGTAAGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCCGCCTCTCTGTTTGCCCATACTCCCCAGCGACACCCCTGCCGTTAAAAGGCATCTCTCTGTCGCTCCCAGTCAGTGC  >  NC_002947/394218‑394508

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.