New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 906270	56 (0.900)	7 (0.120)	7/254	NT	10.4%	coding (281/573 nt)	ampD	N‑acetyl‑anhydromuramyl‑L‑alanine‑amidase
	?	NC_002947	= 906325	67 (1.130)					coding (336/573 nt)	ampD	N‑acetyl‑anhydromuramyl‑L‑alanine‑amidase

GCCTGTTTCGGCACGGGCAAGGTGCAGCAATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGC  >  NC_002947/906122‑906416                                                                                                                                                     |                                                                                                                                                   gCCTGTTTCGGCACGGGCAAGGTGCAGCAATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTT                                                                                                                                                    <  2:292760‑M1/149‑1 (MQ=255)  ccTGTTTCGGCACGGGCAAGGTGCAGCAATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTg                                                                                                                                                   <  2:322379/149‑1 (MQ=255)   cTGTTTCGGCACGGGCAAGGTGCAGCAATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTg                                                                                                                                                   >  8:31924/1‑148 (MQ=255)    tGTTTCGGCACGGGCAAGGTGCAGCAATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGACGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCa                                                                                                                                                 >  5:139264/1‑149 (MQ=255)     gTTTCGGCACGGGCAAGGTGCAGCAATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCAt                                                                                                                                                >  1:135954/1‑149 (MQ=255)           gCACGGGCAAGGTGCAGCAATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGt                                                                                                                                          >  6:41015/1‑149 (MQ=255)                 gCAAGGTGCAGCAATTCTTCCAGAACCGCCAGGCCCCTTATGAACACCCGTATTTTGCCAGCATCAACCACCTGACACTGTCGGCGCACCTGTTCGACGAGCGTGACGGCGCGGGGACTCAGTTCTTGTCGTTGGATGACCGTGCCTg                                                                                                                                     >  5:77318/1‑148 (MQ=255)                       tGCAGCAATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCg                                                                                                                              >  1:236243/1‑149 (MQ=255)                        gcagcaATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCgg                                                                                                                             >  1:230278/1‑149 (MQ=255)                         cagcaATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCgg                                                                                                                             <  3:90894/148‑1 (MQ=255)                          agcaAATCTACCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGGATCAACCACCTGACCGTGTCTGCGCACCTGTTCGACGTGCGTGACTGCGCGGTGTCTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGgt                                                                                                                           <  6:77318/149‑1 (MQ=255)                           gcaATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGgtg                                                                                                                          >  5:270189/1‑149 (MQ=255)                           gcaATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGgtg                                                                                                                          >  6:122577/1‑149 (MQ=255)                            caATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGgtgt                                                                                                                         <  3:309019/149‑1 (MQ=255)                              aTTCTTCCAGAACCGCCTGGCCGCTGATGAACACCCGTATTTTGCCAGCATCAACGACCTGACCGTGTCGGGGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGgtgtgt                                                                                                                       <  3:248051/149‑1 (MQ=255)                                   tcCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGc                                                                                                                  >  2:361035/1‑149 (MQ=255)                                   tcCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCACACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTacagccttcgcgcccgtcaaagctcgacacaccc                                                                                                                  >  4:279483‑M1/1‑115 (MQ=255)                                      aGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCttt                                                                                                               >  5:102522/1‑149 (MQ=255)                                       gAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTg                                                                                                              <  5:41015/149‑1 (MQ=255)                                       gAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTg                                                                                                              <  6:270189/149‑1 (MQ=255)                                                   cccTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTacagccttcgcgcccgtcaaagctcgacacacccgcatgccaggcacggt                                                                                                  >  8:100791‑M1/1‑99 (MQ=255)                                                    ccTGATGAACACCCGTCTTTTGCCACCATCAACCACCTGCCCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGAATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAgg                                                                                                 <  8:290252/149‑1 (MQ=255)                                                    ccTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAgg                                                                                                 >  2:122318/1‑149 (MQ=255)                                                      tgatgaACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCt                                                                                               >  3:47301/1‑149 (MQ=255)                                                           aaCACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTaac                                                                                          >  4:254850‑M2/1‑146 (MQ=255)                                                           aaCACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTaac                                                                                          >  5:189795‑M2/1‑146 (MQ=255)                                                           aaCACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTaac                                                                                          >  6:139264‑M2/1‑146 (MQ=255)                                                            acacCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTaacg                                                                                         >  8:100121‑M2/1‑145 (MQ=255)                                                             cacCAGTAATGTGCCAGCATCAACCACCAGCCCCTGTCGGCGCACCTGTTCGTCGAGCGGTAAGGCGCGGTTACTCACTTAGTGTCGTTGCATGACCAAGCCTTGCATGCGGGTGTGTCGACCTTTGACGGGCTCGAAGGCTGTAACGa                                                                                        <  8:147100/149‑1 (MQ=255)                                                              acCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTaacgac                                                                                       >  2:135954‑M2/1‑143 (MQ=255)                                                               cccGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCTCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTacagccttcgcgcccgtcaaagctcgacacacccgcatgccaggcacggtcatgcaacgaca                                                                                      <  3:279483‑M1/149‑63 (MQ=255)                                                               cccGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACt                                                                                      >  4:133768/1‑149 (MQ=255)                                                                ccGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTacagccttcgcgcccgtcaaagctcgacacacccgcatgccaggcacggtcatgcaacgacac                                                                                     <  7:100791‑M1/149‑64 (MQ=255)                                                                ccGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGt                                                                                             >  2:257683/1‑141 (MQ=255)                                                                ccGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGt                                                                                             <  1:257683/141‑1 (MQ=255)                                                                ccGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACtt                                                                                     >  3:321804/1‑149 (MQ=255)                                                                   tATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTacagccttcgcgcccgtcaaagctcgacacacccgcatgccaggcacggtcatgcaacgacacgaa                                                                                  <  7:17422‑M1/149‑67 (MQ=255)                                                                     ttttGCCAGCTTCTACCACCTTACCGTGTCGGCGCACCTGTTCGTCGAGCGTGAGGGAGCGGTGAGTGAGTTCGTGTCGGTGCATGACCGTTCCTGGCATGCGGGTGTGTAGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTcc                                                                                 <  2:236243/148‑1 (MQ=255)                                                                         gCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCg                                                                             <  1:27015/148‑1 (MQ=255)                                                                          ccAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTGGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGc                                                                           <  2:368109/149‑1 (MQ=255)                                                                           cAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTacagccttcgcgcccgtcaaagctcgacacacccgcatgccaggcacggtcatgcaacgacacgaac                                                                                 <  6:351213‑M1/142‑68 (MQ=255)                                                                           cAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTacagccttcgcgcccgtcaaagctcgacacacccgcatgccaggcacggtcatgcaacgacacgaac                                                                                 >  5:351213‑M1/1‑75 (MQ=255)                                                                           cAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGATCGAGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCa                                                                          >  5:269084/1‑149 (MQ=255)                                                                               aTCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTCACTCAGTTCGTGTCGTTGCATGTCCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGa                                                                      <  1:318250/149‑1 (MQ=255)                                                                                 cAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGc                                                                    >  6:153567/1‑149 (MQ=255)                                                                                   accaccTGACCGTGTCGGCGCACCTGTTCGTCGAGCGGGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTg                                                                  <  4:151421/149‑1 (MQ=255)                                                                                      accTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTgg                                                                 >  5:106291/1‑147 (MQ=255)                                                                                       ccTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAg                                                              <  4:121245/149‑1 (MQ=255)                                                                                        cTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAgg                                                             <  1:104405/149‑1 (MQ=255)                                                                                                  cGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCgacgac                                                   >  2:191787/1‑149 (MQ=255)                                                                                                   ggCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGAcc                                                  >  5:233401/1‑149 (MQ=255)                                                                                                       cACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGcc                                              <  1:361035/149‑1 (MQ=255)                                                                                                       cACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGcc                                              <  3:133768/149‑1 (MQ=255)                                                                                                        aCCTGTTCGTCGAGCATGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGAC‑GTCGCGAAGGCTGTAACGACTTTTCCATCGCCATCGAGCTGGAAGGCACCGACGACCAGccc                                             >  6:258878/1‑148 (MQ=255)                                                                                                         ccTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCg                                                                             >  6:297110/1‑116 (MQ=255)                                                                                                           tGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGAGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCta                                           >  7:244901/1‑148 (MQ=255)                                                                                                            gTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGcc                                              <  8:339390/144‑1 (MQ=255)                                                                                                            gTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGcc                                              >  7:339390/1‑144 (MQ=255)                                                                                                             ttCGTCGAGCGTGACGGCGAGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATAc                                        <  6:269084/149‑1 (MQ=255)                                                                                                                   gAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGc                                  >  7:349381/1‑149 (MQ=255)                                                                                                                      cGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCa                               <  3:361162/149‑1 (MQ=255)                                                                                                                      cGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCa                               <  2:230278/149‑1 (MQ=255)                                                                                                                          aCGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTAt                           <  5:153567/149‑1 (MQ=255)                                                                                                                            ggCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGc                         <  4:321804/149‑1 (MQ=255)                                                                                                                             gcgcGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCg                        <  4:170578/149‑1 (MQ=255)                                                                                                                                     aCTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGa                <  5:122577/149‑1 (MQ=255)                                                                                                                                      cTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGa                <  6:233401/148‑1 (MQ=255)                                                                                                                                       tCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAg               >  1:286315/1‑148 (MQ=255)                                                                                                                                       tCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGc              >  2:203202/1‑149 (MQ=255)                                                                                                                                         aGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCaa            >  5:304389/1‑149 (MQ=255)                                                                                                                                          gTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTaacgacacgaactgagtcaccgcgccgtcacgctcgacgaacaggtgcgccgacacggtcaggtggttgatgctg                  >  5:351213‑M2/1‑67 (MQ=255)                                                                                                                                          gTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTaacgacacgaactgagtcaccgcgccgtcacgctcgacgaacaggtgcgccgacacggtcaggtggttgatgctg                  <  6:351213‑M2/142‑76 (MQ=255)                                                                                                                                          gTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAAc           <  8:244901/149‑1 (MQ=255)                                                                                                                                          gTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAAc           >  7:294721/1‑149 (MQ=255)                                                                                                                                           ttCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTaacgacacgaactgagtcaccgcgccgtcacgctcgacgaacaggtgcgccgacacggtcaggtggttgatgctggcaaaata          <  7:17422‑M2/149‑84 (MQ=255)                                                                                                                                              gtgtCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTaacgacacgaactgagtcaccgcgccgtcacgctcgacgaacaggtgcgccgacacggtcaggtggttgatgctggcaaaatacgg       <  7:100791‑M2/149‑87 (MQ=255)                                                                                                                                              gtgtCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCAc       >  3:117777/1‑149 (MQ=255)                                                                                                                                               tgtCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTaacgacacgaactgagtcaccgcgccgtcacgctcgacgaacaggtgagccgacacggtcaggtggttgatgctggcaaaatacggg      <  3:279483‑M2/149‑88 (MQ=255)                                                                                                                                                gtCGTTacagccttcgcgcccgtcaaagctcgacacacccgcatgccaggcacggtcatgcaacgacacgaactgagtcaccgcgccgtcacgctcgacgaacaggtgcgccgacacggtcaggtggttgatgctggcaaaatacgggt     >  2:135954‑M1/1‑6 (MQ=255)                                                                                                                                                 tCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCAACGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCg    >  2:287677/1‑149 (MQ=255)                                                                                                                                                  cGTTacagccttcgcgcccgtcaaagctcgacacacccgcatgccaggcacggtcatgcaacgacacgaactgagtcaccgcgccgtcacgctcgacgaacaggtgcgccgacacggtcaggtggttgatgctggcaaaatacgggtgt   >  8:100121‑M1/1‑4 (MQ=255)                                                                                                                                                   gTTacagccttcgcgcccgtcaaagctcgacacacccgcatgccaggcacggtcatgcaacgacacgaactgagtcaccgcgccgtcacgctcgacgaacaggtgcgccgacacggtcaggtggttgatgctggcaaaatacgggtgtt  >  4:254850‑M1/1‑3 (MQ=255)                                                                                                                                                   gTTacagccttcgcgcccgtcaaagctcgacacacccgcatgccaggcacggtcatgcaacgacacgaactgagtcaccgcgccgtcacgctcgacgaacaggtgcgccgacacggtcaggtggttgatgctggcaaaatacgggtgtt  >  5:189795‑M1/1‑3 (MQ=255)                                                                                                                                                   gTTacagccttcgcgcccgtcaaagctcgacacacccgcatgccaggcacggtcatgcaacgacacgaactgagtcaccgcgccgtcacgctcgacgaacaggtgcgccgacacggtcaggtggttgatgctggcaaaatacgggtgtt  >  6:139264‑M1/1‑3 (MQ=255)                                                                                                                                                   gTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCgg   >  8:214655/1‑148 (MQ=255)                                                                                                                                                   gTTGCATGACCGTGCCTGGCATGCGGGGGTGTCGAGCTTGTACGGGCGCTAAGGCTTTAACTACTTTACCATCGCCTATGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGc  <  1:122318/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   GCCTGTTTCGGCACGGGCAAGGTGCAGCAATTCTTCCAGAACCGCCTGGCCCCTGATGAACACCCGTATTTTGCCAGCATCAACCACCTGACCGTGTCGGCGCACCTGTTCGTCGAGCGTGACGGCGCGGTGACTCAGTTCGTGTCGTTGCATGACCGTGCCTGGCATGCGGGTGTGTCGAGCTTTGACGGGCGCGAAGGCTGTAACGACTTTTCCATCGGCATCGAGCTGGAAGGCACCGACGACCTGCCCTATACCGATGCCCAGTATGCGGTGCTGGAGCAACTCACCCGGC  >  NC_002947/906122‑906416

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.