New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 964518	52 (0.840)	3 (0.050)	3/256	NT	5.9%	coding (324/828 nt)	phnE	phosphonate ABC transporter permease
	?	NC_002947	= 964562	46 (0.770)					coding (368/828 nt)	phnE	phosphonate ABC transporter permease

ACATGATGCCGATTTTCTTGCACTGCTGTATGAAGCTACCTTGCAGACCCTGGCCGTGGCGACTGCCGGCATGGCGCTGGCGTTGTTGTTGGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTGGGCTACTGATTTTCCTGCGTAGCGTGCCGGAAATCGTCTGGGCGTTGCTGTTCGTGCGCGCTGTGGGGCTGGGGCCGACGGCGGGCGTACTGGCTATC  >  NC_002947/964371‑964665                                                                                                                                                    |                                                                                                                                                    acaTGATGCCGATTTTCTTGCACTGCTGTATGAAGCTACCTTGCAGACCCTGGCCGTGGCGACTGCCGGCATGGCGCTGGCGTTGTTGTTGGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCa                                                                                                                                                    >  1:352988‑M1/1‑148 (MQ=255)     gatgCCGATTTTCTTGCACTGCTGTATGAAGCTACCTTGCAGACCCTGGCCGTGGCGACTGCCGGCATGGCGCTGGCGTTGTTGTTGGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGcggcgg                                                                                                                                                >  5:98919/1‑149 (MQ=255)       tgCCGATTTTCTTGCACTGCTGTATGAAGCTACCTTGCAGACCCTGGCCGTGGCGACTGCCGGCATGGCGCTGGCGTTGTTGTTGGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCggcgggc                                                                                                                                              <  5:284941/149‑1 (MQ=255)        gCCGATTTTCTTGCACTGCTGTATGAAGCTACCTTGCAGACCCTGGCCGTGGCGACTGCCGGCATGGCGCTGGCGTTGGTGTTGGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCggcgggcg                                                                                                                                             >  8:104970/1‑149 (MQ=255)        gCCGATTTTCTTGCACTGCTGTATGAAGCTACCTTGCAGACCCTGGCCGTGGCGACTGCCGGCATGGCGCTGGCATTGTTGTTGGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCggcgggcg                                                                                                                                             >  2:9856/1‑149 (MQ=255)         ccGATTTTCTTGCACTGCTGTATGAAGCTACCTTGCAGACCCTGGCCGTGGCGACTGCCGGCATGGCGCTGGCGTTGTTGTTGGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGgcgggcgg                                                                                                                                            <  1:236691/149‑1 (MQ=255)                ccTTGCACTGCTGTATGAAGCTACCTTGCAGACCCTGGCCGTGGCGACTGCCGGCATGGCGCTGGCGTTGTTGTTGGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGcgggccggg                                                                                                                                      <  1:140290/147‑1 (MQ=255)                     cACTGCTGTCTGAAGCTACCTTGCAGACCCTGGCCGTGGCGACTGCCGGCATGGCGCTGGCGTTGTGGTTGGCGATCCCGGCGGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTg                                                                                                                                 <  8:97245/148‑1 (MQ=255)                     cACTGCTGTATGAAGCTACCTTGCAGACCCTGGCCGTGGCGACTGCCGGCATGGCGCTGGCGTTGTTGTTGGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCggcggg                                                                                                                                               >  1:293351/1‑134 (MQ=255)                     cACTGCTGTATGAAGCTACCTTGCAGACCCTGGCCGTGGCGACTGCCGGCATGGCGCTGGCGTTGTTGTTGGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCggcggg                                                                                                                                               <  2:293351/134‑1 (MQ=255)                      aCTGCTGTATGAAGCTACCTTGCAGACCCTGGCCGTGGCGACTGCCGGCATGGCGCTGGCGTTGTTGTTGGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGt                                                                                                                               >  5:175485/1‑149 (MQ=255)                          ctgTATGAAGCTACCTTGCAGACCCTGGCCGTGGCGACTGCCGGCATGGCGCTGGCGTTGTTGTTGGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTcgc                                                                                                                            <  6:125521/148‑1 (MQ=255)                          ctgTATGAAGCTACCTTGCAGACCCTGGCCGTGGCGACTGCCGGCATGGCGCTGGCGTTGTTGTTGGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTcgc                                                                                                                            <  2:282381/148‑1 (MQ=255)                             tATGAAGCTACCTTGCAGACCCTGGCCGTGGCGACTGCCGGCATGGCGCTGGCGTTGTTGTTGGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGa                                                                                                                          <  2:208368/147‑1 (MQ=255)                             tATGAAGCTACCTTGCAGACCCTGGCCGTGGCGACTGCCGGCATGGCGCTGGCGTTGTTGTTGGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACt                                                                                                                        >  1:297754/1‑149 (MQ=255)                                    cTACCTTGCAGACCCTGGCCGTGGCGACTGCCGGCATGGCGCTGGCGTTGTTGTTGGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTgcgc                                                                                                                 <  3:32681/149‑1 (MQ=255)                                        cTTGCAGACCCTGGCCGTGGCGACTGCCGGCATGGCGCTGGCGTTGTTGTTGGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGc                                                                                                             <  6:328271/149‑1 (MQ=255)                                         ttGCAGACCCTGGCCGTGGCGACTGCCGGCATGGCGCTGGCGTTGTTGTTGGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGcc                                                                                                            >  3:224454/1‑149 (MQ=255)                                         ttGCAGACCCTGGCCGTGGCGACTGCCGGCATCGCGCTGGCGTTGTTGTTGGCGATCCCGCCTGCCTTGCTCGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCGGGGCGCGACTGTTGCGCCTGcc                                                                                                            >  8:322929/1‑149 (MQ=255)                                            cAGACCCTGGCCGTGGCGACTGCCGGCATGGCGCTGGCGTTGTTGTTGGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCgg                                                                                                          <  6:175485/148‑1 (MQ=255)                                                cccTGGCCGTGGCGACTGCCGGCATGGCGCTGGCGTTGTTGTTGGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCaccggcaggcgcaacagtcgcgaccagagcccggcccgcccgccgcgt                                                                                                     <  2:352988‑M1/149‑49 (MQ=255)                                                cccTGGCCGTGGCGACTGCCGGCATGGCGCTGGCGTTGTTGTTGGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTgcgt                                                                                                     >  5:141475‑M2/1‑145 (MQ=255)                                                cccTGGCCGTGGCGACTGCCGGCATGGCGCTGGCGTTGTTGTTGGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTgcgt                                                                                                     >  3:28043‑M2/1‑145 (MQ=255)                                                 ccTGGCCGTGGCGACTGCCGGCATGGCGCTGGCGTTGTTGTTGGCGATCCCGGCTGGCTTGCTGACCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTgcgtg                                                                                                    <  5:166883‑M2/149‑6 (MQ=255)                                                  cTGGCCGTGGCGACTGCCGGCATGGCGCTGGCGTTGTTGTTGGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTgg                                                                                                   >  1:303440/1‑149 (MQ=255)                                                   tGGCCGTGGCGACTGCCGGCATGGCGCTGGCGTTGTTGTTGGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTggg                                                                                                  >  3:143610/1‑149 (MQ=255)                                                   tGGCCGTGGCGACTGCCGGCATGGCGCTGGCGTTGTTGTTGGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTggg                                                                                                  >  1:234579/1‑149 (MQ=255)                                                        gTGGCGACTGCCGGCATGGCGCTGGCGTTGTTGTTGGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTGGGCTACt                                                                                             >  1:226384/1‑149 (MQ=255)                                                             gACTGCCGGCATGGCGCTGGCGTTGTTGTTGGCGATACCCGCTGGCTTTCTGGCCAGCCGTGCCTTGTCCTTTCGTGCTGCTTCACGCGGCGGGCGGGCCCGGCTCTGGTAGCGACTGTTGCGCCTGCCGCTGCGTGGGCTACTGAttt                                                                                        >  7:50408/1‑149 (MQ=255)                                                              aCTGCCGGCATGGCGCTGGCGTTGTTGTTGGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCTCCTGCCGGTGCGTGGGCTACTGAtttt                                                                                       <  4:143610/149‑1 (MQ=255)                                                                        tGGCGCGGGCGTTGTGGTTGGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGGCGCGACTGTTGCGCCTGCCGGTGCGTGGGCTACTGATTTTCCTGCGTAGc                                                                             <  8:272456/149‑1 (MQ=255)                                                                                gCGTTGTTGTTGGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTGGGCTACTGATTTTCCTGCGTAGCGTGCCg                                                                       <  1:72179/147‑1 (MQ=255)                                                                                  gttgttgttGGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCCTGCAGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTAGCGCCAGCCGGAGCGTCGGCTACTGATTTTCCTGCGTACCGTGCCCGaaa                                                                   >  2:125624/1‑149 (MQ=255)                                                                                        gttgGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTGGGCTACTGATTTTCCTGCGTAGCGTGCCGGAAATCGTCt                                                             >  1:244800/1‑149 (MQ=255)                                                                                        gttgGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTGGGCTACTGATTTTCCTGCGTAGCGTGCCGGAAATCGTCt                                                             >  6:155692/1‑149 (MQ=255)                                                                                         ttgGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTGGGCTACTGATTTTCCTGCGTAGCGTGCCGGAAATCGTCTg                                                            >  1:175568/1‑149 (MQ=255)                                                                                         ttgGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTGGGCTACTGATTTTCCTGCGTAGCGTGCCGGAAATCGTCTg                                                            <  4:224454/149‑1 (MQ=255)                                                                                         ttgGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTGGGCTACTGATTTTCCTGCGTAGCGTGCCGGAAATCGTCTg                                                            >  3:31417/1‑149 (MQ=255)                                                                                           ggCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTGGGCTACTGATTTTCCTGCGTAGCGTGCCGGAAATCGTCTgg                                                           <  1:9856/148‑1 (MQ=255)                                                                                            gCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTGGGCTACTGATTTTCCTGCGTAGCGTGCCGGAAATCGTCTGGGc                                                         >  7:182640/1‑149 (MQ=255)                                                                                              gATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTc                                                                                                                              <  3:45788/78‑1 (MQ=255)                                                                                              gATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTc                                                                                                                              >  4:45788/1‑78 (MQ=255)                                                                                              gATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTGGGCTACTGATTTTCCTGCGTAGCGTGCCGGAAATCGTCTGGGCGt                                                       >  3:68716/1‑149 (MQ=255)                                                                                                  ccGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTGGGCTACTGATTTTCCTGCGTAGCGTGCCGGAAATCGTCTGGGCGTTGc                                                    <  2:226384/148‑1 (MQ=255)                                                                                                   cGGCTGGCTTGCTGGCCAGCCCTGCATAGTCCTTGCTTGCTGCTTCACGAGCCGGGCGGGCCGCGCTCTGGTCGCGACTGTTGCGCCTGCCg                                                                                                           >  5:101291/1‑92 (MQ=255)                                                                                                    ggctggctTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTGGGCTACTGATTTTCCTGCGTAGCGTGCCGGAAATCGTCTGGGCGTTGCTGt                                                 >  5:45680/1‑149 (MQ=255)                                                                                                      ctggctTGCTGCCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTGGGCTACTGATTTTCCTGCGTAGCGTGCCGGAAATCGTCTGGGCGTTGCTGTTc                                               <  6:166883/149‑1 (MQ=255)                                                                                                         gctTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCaccggcaggcgcaacagtcgcgaccagagcccggcccgcccgccgcgtgaag                                                                                                 <  4:323700‑M1/96‑53 (MQ=255)                                                                                                         gctTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCaccggcaggcgcaacagtcgcgaccagagcccggcccgcccgccgcgtgaag                                                                                                 >  3:323700‑M1/1‑44 (MQ=255)                                                                                                             gCTGGCCTGGCGTGCCTTGTCCTTGCGGGCGGCTTCCTGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTGGGCTACTGATTTTCCTGCGTAGCGTGCCGGAATTCGTCTGGGCGTTGCTGTTCGTgcgc                                         <  8:250439/148‑1 (MQ=255)                                                                                                                 gCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTGGGCTACTGATTTTCCTGCGTAGCGTGCCGGAAATCGTCTGGGCGTTGCTGTTCGTGCGCGCtgt                                    >  3:285271/1‑149 (MQ=255)                                                                                                                     gCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTGGGCTACTGATTTTCCTGCGTAGCGTGCCGGAAATCGTCTGGGCGTTGCTGTTCGTGCGCGCTGtgggg                                >  6:119412/1‑149 (MQ=255)                                                                                                                           ccTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGATGCGCCTGCCGGTGCGTGGGCTACTGATTTTCCTGCGTAGCGTGCCGGAAATCGTCTGGGCGTTGCTGTTCGTGCGCGCTGtggggctgggg                          >  1:107854/1‑149 (MQ=255)                                                                                                                                  ctcgCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCGCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTGGGCTACTGATTTTCCTGCGTAGCGTGCCGGAAATCGTCTGGGCGTTGCTGTTCGTGCGCGCTGTGGGGCTGGGGCCGAcgg                   <  7:83440/146‑1 (MQ=255)                                                                                                                                  cTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTGGGCTACTGATTTTCCTGCGTAGCGTGCCGGAAATCGTCTGGGCGTTGCTGTTc                                               <  8:95854/121‑1 (MQ=255)                                                                                                                                   ttGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTGGGCTACTGATTTTCCTGCGTAGCGTGCCGGAAATCGTCTGGGCGTTGCTGTTCGTGCGCGCTGTGGGGCTGGGGCCGAcggc                  >  7:237632/1‑149 (MQ=255)                                                                                                                                      cGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTGGGCTACTGATTTTCCTGCGTAGCGTGCCGGAAATCGTCTGGGCGTTGCTGTTCGTGCGCGCTGTGGGGCTGGGGCCGAcggcgg                <  2:175568/148‑1 (MQ=255)                                                                                                                                       gTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTGGGCTACTGATTTTCCTGCGTAGCGTGCCGGAAATCGTCTGGGCGTTGCTGTTCGTGCGCGCTGTGGGGCTGGGGCCGACggcgggc              <  4:68716/149‑1 (MQ=255)                                                                                                                                         gctgctTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTGGGCTACTGATTTTCCTGCGTAGCGTGCCGGAAATCGTCTGGGCGTTGCTGTTCGTGCGCGCTGTGGGGCTGGGGCCGACggcgggcg             >  6:328193/1‑148 (MQ=255)                                                                                                                                             ctTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTgcgtgaagcagcacgcaaggacaaggcacggctggccagcaagc                                                             >  3:323700‑M2/1‑52 (MQ=255)                                                                                                                                             ctTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTgcgtgaagcagcacgcaaggacaaggcacggctggccagcaagc                                                             <  4:323700‑M2/96‑45 (MQ=255)                                                                                                                                              ttCACGCGGCGGGCGGGCCTGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTGGGCTACTGATTTTCCTGCGTAGCGTGCCGGAAATCGTCTGTGCGTTGCTGTTCGTGCGCGCTGTGGTGCTGGGGCCGACGGCGGCAGTACTgg       >  8:264060/1‑149 (MQ=255)                                                                                                                                                cACGCaccggcaggcgcaacagtcgcgaccagagcccggcccgcccgccgcgtgaagcagcacgcaaggacaaggcacggctggtcagcaagccagccgggatcgccaacaacaacgccagcgccatgccggcagtcgccacggccagg     <  5:166883‑M1/149‑145 (MQ=255)                                                                                                                                                cACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTGGGCTACTGATTTTCCTGCGTAGCGTGCCGGAAATCGTCTGGGCGTTGCTGTTCGTGCGCGCTGTGGGGCTGGGGCCGACGGCGGGCGTACTgg       <  2:297754/147‑1 (MQ=255)                                                                                                                                                 aCGCaccggcaggcgcaacagtcgcgaccagagcccggcccgcccgccgcgtgaagcagcacgcaaggacaaggcacggctggccagcaagccagccgggatcgccaacaacaacgccagcgccatgccggcagtcgccacggccaggg    >  3:28043‑M1/1‑4 (MQ=255)                                                                                                                                                 aCGCaccggcaggcgcaacagtcgcgaccagagcccggcccgcccgccgcgtgaagcagcacgcaaggacaaggcacggctggccagcaagccagccgggatcgccaacaacaacgccagcgccatgccggcagtcgccacggccaggg    >  5:141475‑M1/1‑4 (MQ=255)                                                                                                                                                 aCGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTgcgtgaagcagcacgcaaggacaaggcacggctggccagcaagccagccgggatcgccaacaacaacgccagcgccatgccggcagtcgccacggccaggg    <  2:352988‑M2/149‑102 (MQ=255)                                                                                                                                                 aCGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTGGGCTACTGATTTTCCTGCGTAGCGTGCCGGAAATCGTCTGGGCGTTGCTGTTCGTGCGCGCTGTGGGGCTGGGGCCGACGGCGGGCTTACTGGCTa    <  6:45680/149‑1 (MQ=255)                                                                                                                                                 aCGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTGGGCTACTGATTTTCCTGCGTAGCGTGCCGGAAATCGTCTGGGCGTTGCTGTTCGTGCGCGCTGTGGGGCTGGGGCCGACGGCGGGCGTACTGGCTa    >  3:355718/1‑149 (MQ=255)                                                                                                                                                   gcggcgGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTGGGCTACTGATTTTCCTGCGTAGCGTGCCGGAAATCGTCTGGGCGTTGCTGTTCGTGCGCGCTGTGGGGCTGGGGCCGACGGCGGGCGTACTGGCTATc  >  2:273010/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                    ACATGATGCCGATTTTCTTGCACTGCTGTATGAAGCTACCTTGCAGACCCTGGCCGTGGCGACTGCCGGCATGGCGCTGGCGTTGTTGTTGGCGATCCCGGCTGGCTTGCTGGCCAGCCGTGCCTTGTCCTTGCGTGCTGCTTCACGCGGCGGGCGGGCCGGGCTCTGGTCGCGACTGTTGCGCCTGCCGGTGCGTGGGCTACTGATTTTCCTGCGTAGCGTGCCGGAAATCGTCTGGGCGTTGCTGTTCGTGCGCGCTGTGGGGCTGGGGCCGACGGCGGGCGTACTGGCTATC  >  NC_002947/964371‑964665

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.