New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1023974	39 (0.630)	4 (0.070)	4/254	NT	9.5%	coding (1173/1380 nt)	opdP	glycine‑glutamate dipeptide porin
	?	NC_002947	= 1023998	39 (0.660)					coding (1149/1380 nt)	opdP	glycine‑glutamate dipeptide porin

GGCCTTGCTGGCGCGATGGGTGGTGTAGGTGGCGCGGATGCTGGTGTCTTTCAGCGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGTTGGGGCCGTTGAAGTCCGACAGCAGCGAGTTGGC  >  NC_002947/1023830‑1024120                                                                                                                                                 |                                                                                                                                                   ggCCTTGCTGGCGCGATGGGTGGTGTAGGTGGCGCGGATGCTGGTGTCTTTCAGCGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGt                                                                                                                                                <  4:99732/149‑1 (MQ=255)   ccTTGCTGGCGCGATGGGTGGTGTAGGTGGCGCGGATGCTGGTGTCTTTCAGCGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTgg                                                                                                                                              <  4:159824/149‑1 (MQ=255)       gCTGGCGCGATGGGTGGTGTAGGTGGCGCGGATGCTGGTGTCTTTCAGCGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGt                                                                                                                                            <  7:37754/147‑1 (MQ=255)             gcgATGGGTGGTGTAGGTGGCGCGGATGCTGGTGTCTTTCAGCGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGa                                                                                                                                    >  5:174250/1‑149 (MQ=255)                    gtggtgTAGGTGGCGCGGATGCTGGTGTCTTTCAGCGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCa                                                                                                                             >  4:56243/1‑149 (MQ=255)                    gtggtgTAGGTGGCGCGGATGCTGGTGTCTTTCAGCGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATAACCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGAAGTGCCGCGGTCGTGGGTGCCGTCGATAcccaa                                                                                                                             >  4:5065/1‑147 (MQ=255)                          tAGGTGGCGCGGATGCTGGTGTCTTTCAGCGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGctggggtatcgacggcacccactaccgcg                                                                                                                       <  5:90907‑M1/149‑30 (MQ=255)                            ggTTGCGCGGAGGCTGGTGTCTTTCAGCGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCGAGGCCATTCACGTCGTAGGCAGTGCCGCGTTAGTGGGTGCCGTCGATACCCCAGccgcgg                                                                                                                      >  3:5065‑M2/1‑142 (MQ=255)                            ggTGGCGCGGATGCTGGTGTCTTTCAGCGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGctggggtatcgacggcacccactaccgcggc                                                                                                                     <  1:64834‑M1/149‑32 (MQ=255)                            ggTGGCGCGGATGCTGGTGTCTTTCAGCGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGctggggtatcgacggcacccactaccgcgg                                                                                                                      <  3:356863‑M1/148‑31 (MQ=255)                            ggTGGCGCGGATGCTGGTGTCTTTCAGCGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGccgcgg                                                                                                                      >  2:97561‑M2/1‑142 (MQ=255)                            ggTGGCGCGGATGCGGGTGTCTTTCAGCGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGGGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGccgcgg                                                                                                                      >  3:56243‑M2/1‑142 (MQ=255)                             gTGGCGCGGATGCTGGTGTCTTTCAGCGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGctggggtatcgacggcacccactaccgcggca                                                                                                                    <  4:305229‑M1/149‑33 (MQ=255)                             gTGGCGCGGATGCTGGTGTCTTTCAGCGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGc                                                                                                                    >  6:315199/1‑149 (MQ=255)                              tGGCGCGGATGCTGGTGTCTTTCAGCGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTgg                                                                                                                                              >  7:349569/1‑122 (MQ=255)                              tGGCGCGGATGCTGGTGTCTTTCAGCGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTgg                                                                                                                                              <  8:349569/122‑1 (MQ=255)                                gcgcGGATGCTGGTGTCTTTCAGCGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGtt                                                                                                                 <  1:128947/149‑1 (MQ=255)                                          tGGTGTCTTTCAGCGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGtt                                                                                                        >  7:266095/1‑148 (MQ=255)                                                    cAGCGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATAGCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTTGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTcagg                                                                                              <  6:174250/148‑1 (MQ=255)                                                      gCGGCCCGGTCTGCAACGCGTTGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCTGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTcaggcca                                                                                           <  3:338909/149‑1 (MQ=255)                                                       cGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTcaggccag                                                                                          <  5:315199/149‑1 (MQ=255)                                                          cccGCTCTGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCa                                                                                       >  4:190311/1‑149 (MQ=255)                                                              ctctGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGcc                                                                                   <  4:166392/149‑1 (MQ=255)                                                                     aCGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCGGCGGTAGTGGGTGCCGTCGATACCGCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGgc                                                                            <  8:266095/149‑1 (MQ=255)                                                                      cgcgTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGgcg                                                                           >  3:68320/1‑149 (MQ=255)                                                                             cTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGtt                                                                    <  6:33367/149‑1 (MQ=255)                                                                                   ccGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTcag                                                                                               >  4:309550/1‑116 (MQ=255)                                                                                   ccGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTcag                                                                                               <  3:309550/116‑1 (MQ=255)                                                                                     gATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCAt                                                                       >  7:83487/1‑138 (MQ=255)                                                                                     gATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCAt                                                                       <  8:83487/138‑1 (MQ=255)                                                                                          cccACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGa                                                        >  8:246076/1‑148 (MQ=255)                                                                                          cccACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGa                                                        >  5:132382/1‑148 (MQ=255)                                                                                           ccACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGa                                                        >  7:261311/1‑147 (MQ=255)                                                                                            cACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAg                                                     <  7:246076/149‑1 (MQ=255)                                                                                                  tAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAg                                               >  3:87736/1‑149 (MQ=255)                                                                                                  tAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAg                                               >  1:288467/1‑149 (MQ=255)                                                                                                    gTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGc                                              >  3:74009/1‑148 (MQ=255)                                                                                                        gTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGAtt                                          >  1:131831/1‑148 (MQ=255)                                                                                                         tttCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTtc                                        >  3:326217/1‑149 (MQ=255)                                                                                                             gCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGt                                    >  7:18925/1‑149 (MQ=255)                                                                                                             gCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGt                                    >  7:24717/1‑149 (MQ=255)                                                                                                                       ccATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGTTGGGGCCGtt                          <  4:74009/149‑1 (MQ=255)                                                                                                                                tcgtAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGTTGGGGCCGTTGAAGTCCGa                 >  2:175480/1‑149 (MQ=255)                                                                                                                                 cgtAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAg                                               <  1:240231/118‑1 (MQ=255)                                                                                                                                 cgtAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAg                                               >  2:240231/1‑118 (MQ=255)                                                                                                                                       cAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGTTGGGGCCGTTGAAGTCCGACagcagc          <  4:68320/149‑1 (MQ=255)                                                                                                                                          tGCCGCGGTAGTGGGTGCCGTCGATACCCCAGccgcggcactgcctacgacgtgaatggcctggatggcgaaacccactatgagtggggtatcggcaccagctacgcgttgcagagcgggccgctgaaagacaccagcatccgcgccac       <  4:305229‑M2/149‑118 (MQ=255)                                                                                                                                           gCCGCGGTAGTGGGTGCCGTCGATACCCCAGccgcggcactgcctacgacgtgaatggcctggatggcgaaacccactatgagtggggtatcggcaccagctacgcgttgcagagcgggccgctgaaagacaccagcatccgcgccacc      <  1:64834‑M2/149‑119 (MQ=255)                                                                                                                                            ccGCGGctggggtatcgacggcacccactaccgcggcactgcctacgacgtgaatggcctggatggcgaaaccccctatgagtggggtatcggcaccagctacgcgttgcagagcgggccgctgaaagacacccgcatccgcgccacc      >  3:56243‑M1/1‑6 (MQ=255)                                                                                                                                            ccGCGGctggggtatcgacggcacccactaccgcggcactgcctacgacgtgaatggcctggatggcgaaacccactatgagtggggtatcggcaccagctacgcgttgcagagcgggccgctgaaagacaccagcatccgcgccacc      >  2:97561‑M1/1‑6 (MQ=255)                                                                                                                                            ccGCGGctggggtatcgacggcacccactaacgcggcactgcctacgacgtgaatggcctcgatggcgaaacccactatgagtggggtatcggcaccagctacgcgttgcagagcgggccgctgaaagacaccagcctccgcgcaacc      >  3:5065‑M1/1‑6 (MQ=255)                                                                                                                                            ccGCGGTAGTGGGTGCCGTCGATACCCCAGccgcggcactgcctacgacgtgaatggcctggatggcgaaacccactatgagtggggtatcggcaccagctacgcgttgcagagcgggccgctgaaagacaccagcatccgcgccacc      <  3:356863‑M2/148‑119 (MQ=255)                                                                                                                                            ccGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGTTGGGGCCGTTGAAGTCCGACAGCAGCGAGtt     >  1:89788/1‑149 (MQ=255)                                                                                                                                             cgcgGTAGTGGGTGCCGTCGATACCCCAGccgcggcactgcctacgacgtgaatggcctggatggcgaaacccactatgagtggggtatcggcaccagctacgcgttgcagagcgggccgctgaaagacaccagcatccgcgccaccta    <  5:90907‑M2/149‑121 (MQ=255)                                                                                                                                              gcgGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGTTGGGGCCGTTGAAGTCCGACAGCAGCGAGTTgg   >  1:366147/1‑149 (MQ=255)                                                                                                                                               cgGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGTTGGGGCCGTTGAAGTCCGACAGCAGCGAGTTGGc  <  8:261311/149‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                   GGCCTTGCTGGCGCGATGGGTGGTGTAGGTGGCGCGGATGCTGGTGTCTTTCAGCGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGTTGGGGCCGTTGAAGTCCGACAGCAGCGAGTTGGC  >  NC_002947/1023830‑1024120

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.