New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1023974	39 (0.630)	4 (0.070)	4/254	NT	9.5%	coding (1173/1380 nt)	opdP	glycine‑glutamate dipeptide porin
	?	NC_002947	= 1023998	39 (0.660)					coding (1149/1380 nt)	opdP	glycine‑glutamate dipeptide porin

GGTGGCGCGGATGCTGGTGTCTTTCAGCGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGTTGGGGCCGTTGAAGTCCGACAGCAGCGAGTTGGCCAGGAAGATGCCGTTGGTTTCGTG  >  NC_002947/1023857‑1024144                                                                                                                                              |                                                                                                                                                   ggTTGCGCGGAGGCTGGTGTCTTTCAGCGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCGAGGCCATTCACGTCGTAGGCAGTGCCGCGTTAGTGGGTGCCGTCGATACCCCAGccgcgg                                                                                                                                              >  3:5065‑M2/1‑142 (MQ=255) ggTGGCGCGGATGCTGGTGTCTTTCAGCGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGccgcgg                                                                                                                                              >  2:97561‑M2/1‑142 (MQ=255) ggTGGCGCGGATGCGGGTGTCTTTCAGCGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGGGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGccgcgg                                                                                                                                              >  3:56243‑M2/1‑142 (MQ=255)  gTGGCGCGGATGCTGGTGTCTTTCAGCGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGc                                                                                                                                            >  6:315199/1‑149 (MQ=255)     gcgcGGATGCTGGTGTCTTTCAGCGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGtt                                                                                                                                         <  1:128947/149‑1 (MQ=255)               tGGTGTCTTTCAGCGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGtt                                                                                                                                >  7:266095/1‑148 (MQ=255)                         cAGCGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATAGCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTTGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTcagg                                                                                                                      <  6:174250/148‑1 (MQ=255)                           gCGGCCCGGTCTGCAACGCGTTGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCTGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTcaggcca                                                                                                                   <  3:338909/149‑1 (MQ=255)                            cGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTcaggccag                                                                                                                  <  5:315199/149‑1 (MQ=255)                               cccGCTCTGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCa                                                                                                               >  4:190311/1‑149 (MQ=255)                                   ctctGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGcc                                                                                                           <  4:166392/149‑1 (MQ=255)                                          aCGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCGGCGGTAGTGGGTGCCGTCGATACCGCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGgc                                                                                                    <  8:266095/149‑1 (MQ=255)                                           cgcgTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGgcg                                                                                                   >  3:68320/1‑149 (MQ=255)                                                  cTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGtt                                                                                            <  6:33367/149‑1 (MQ=255)                                                        ccGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTcag                                                                                                                       >  4:309550/1‑116 (MQ=255)                                                        ccGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTcag                                                                                                                       <  3:309550/116‑1 (MQ=255)                                                          gATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCAt                                                                                               <  8:83487/138‑1 (MQ=255)                                                          gATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCAt                                                                                               >  7:83487/1‑138 (MQ=255)                                                               cccACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGa                                                                                >  5:132382/1‑148 (MQ=255)                                                               cccACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGa                                                                                >  8:246076/1‑148 (MQ=255)                                                                ccACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGa                                                                                >  7:261311/1‑147 (MQ=255)                                                                 cACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAg                                                                             <  7:246076/149‑1 (MQ=255)                                                                       tAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAg                                                                       >  1:288467/1‑149 (MQ=255)                                                                       tAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAg                                                                       >  3:87736/1‑149 (MQ=255)                                                                         gTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGc                                                                      >  3:74009/1‑148 (MQ=255)                                                                             gTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGAtt                                                                  >  1:131831/1‑148 (MQ=255)                                                                              tttCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTtc                                                                >  3:326217/1‑149 (MQ=255)                                                                                  gCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGt                                                            >  7:24717/1‑149 (MQ=255)                                                                                  gCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGt                                                            >  7:18925/1‑149 (MQ=255)                                                                                            ccATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGTTGGGGCCGtt                                                  <  4:74009/149‑1 (MQ=255)                                                                                                     tcgtAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGTTGGGGCCGTTGAAGTCCGa                                         >  2:175480/1‑149 (MQ=255)                                                                                                      cgtAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAg                                                                       <  1:240231/118‑1 (MQ=255)                                                                                                      cgtAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAg                                                                       >  2:240231/1‑118 (MQ=255)                                                                                                            cAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGTTGGGGCCGTTGAAGTCCGACagcagc                                  <  4:68320/149‑1 (MQ=255)                                                                                                               tGCCGCGGTAGTGGGTGCCGTCGATACCCCAGccgcggcactgcctacgacgtgaatggcctggatggcgaaacccactatgagtggggtatcggcaccagctacgcgttgcagagcgggccgctgaaagacaccagcatccgcgccac                               <  4:305229‑M2/149‑118 (MQ=255)                                                                                                                gCCGCGGTAGTGGGTGCCGTCGATACCCCAGccgcggcactgcctacgacgtgaatggcctggatggcgaaacccactatgagtggggtatcggcaccagctacgcgttgcagagcgggccgctgaaagacaccagcatccgcgccacc                              <  1:64834‑M2/149‑119 (MQ=255)                                                                                                                 ccGCGGTAGTGGGTGCCGTCGATACCCCAGccgcggcactgcctacgacgtgaatggcctggatggcgaaacccactatgagtggggtatcggcaccagctacgcgttgcagagcgggccgctgaaagacaccagcatccgcgccacc                              <  3:356863‑M2/148‑119 (MQ=255)                                                                                                                 ccGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGTTGGGGCCGTTGAAGTCCGACAGCAGCGAGtt                             >  1:89788/1‑149 (MQ=255)                                                                                                                  cgcgGTAGTGGGTGCCGTCGATACCCCAGccgcggcactgcctacgacgtgaatggcctggatggcgaaacccactatgagtggggtatcggcaccagctacgcgttgcagagcgggccgctgaaagacaccagcatccgcgccaccta                            <  5:90907‑M2/149‑121 (MQ=255)                                                                                                                   gcgGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGTTGGGGCCGTTGAAGTCCGACAGCAGCGAGTTgg                           >  1:366147/1‑149 (MQ=255)                                                                                                                    cgGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGTTGGGGCCGTTGAAGTCCGACAGCAGCGAGTTGGc                          <  8:261311/149‑1 (MQ=255)                                                                                                                        aGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGTTGGGGCCGTTGAAGTCCGACAGCAGCGAg                               <  7:82730/140‑1 (MQ=255)                                                                                                                        aGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGTTGGGGCCGTTGAAGTCCGACAGCAGCGAg                               >  8:82730/1‑140 (MQ=255)                                                                                                                            ggTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGGCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGTTGGGGCCGTTGAAGTCCGACAGCAGCGAGTTGGCCAGGAAg                   <  2:288467/148‑1 (MQ=255)                                                                                                                                   tCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGTTGGGGCCGTTGAAGTCCGACAGCAGCGAGTTGGCCAGGAAGATGCCGtt           <  8:18925/149‑1 (MQ=255)                                                                                                                                   tCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGTTGGGGCCGTTGAAGTCCGACAGCAGCGAGTTGGCCAGGAAGATGCCGtt           <  8:24717/149‑1 (MQ=255)                                                                                                                                      aTACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGTTGGGGCCGTTGAAGTCCGACAGCAGCGAGTTGGCCAGGAAGATGCCGTTGGt        <  6:132382/149‑1 (MQ=255)                                                                                                                                         ccccAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGTTGGGGCCGTTGAAGTCCGACAGCAGCGAGTTGGCCAGGAAGATGCCGTTGGttt      <  4:326217/148‑1 (MQ=255)                                                                                                                                          cccAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGTTGGGGCCGTTGAAGTCCGACAGCAGCGAGTTGGCCAGGAAGATGCCGTTGGTTTCg    >  5:233717/1‑149 (MQ=255)                                                                                                                                          cccAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCAAAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGTTGGGGCCGTTGAAGTCCGACAGCAGCGAGTTGGCCAGGAAGATGCCGTTGGTTTCg    >  1:91097/1‑149 (MQ=255)                                                                                                                                           ccAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGTTGGGGCCGTTGAAGTCCGACAGCAGCGAGTTGGCCAGGAAGATGCCGTTGGTTTCGt   <  2:91097/149‑1 (MQ=255)                                                                                                                                           ccAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCAGCAGCGATTTCTCGTTGGGGCCGTTGAAGTCCGACAGCAGCGAGTTGGCCAGGAAGa                  >  5:287058/1‑134 (MQ=255)                                                                                                                                            cAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGTTGGGGCCGTTGAAGTCCGACAGCAGCGAGTTGGCCAGGAAGATGCCGTTGGTTTCGTg  <  6:233717/149‑1 (MQ=255)                                                                                                                                            cAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGTTGGGGCCGTTGAAGTCCGACAGCAGCGAGTTGGCCAGGAAGATGCCGTTGGTTTCGTg  >  1:27614/1‑149 (MQ=255)                                                                                                                                              |                                                                                                                                                   GGTGGCGCGGATGCTGGTGTCTTTCAGCGGCCCGCTCTGCAACGCGTAGCTGGTGCCGATACCCCACTCATAGTGGGTTTCGCCATCCAGGCCATTCACGTCGTAGGCAGTGCCGCGGTAGTGGGTGCCGTCGATACCCCAGCCGCGGGCGTTGTACAGGTTGAACTTCAGGCCAGGCACGCCATAGGGCGCCATGTTCAGCACATAGGAAAGCTGCAGCGATTTCTCGTTGGGGCCGTTGAAGTCCGACAGCAGCGAGTTGGCCAGGAAGATGCCGTTGGTTTCGTG  >  NC_002947/1023857‑1024144

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.