New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1311719	49 (0.790)	6 (0.110)	6/240	NT	11.3%	intergenic (‑187/+91)	PP_1144/rapA	membrane protein/RNA polymerase‑associated protein RapA
	?	NC_002947	= 1311778	50 (0.890)					intergenic (‑246/+32)	PP_1144/rapA	membrane protein/RNA polymerase‑associated protein RapA

CCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCAT  >  NC_002947/1311574‑1311866                                                                                                                                                  |                                                                                                                                                    cccTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGC                                                                                                                                                     <  7:221251‑M1/146‑1 (MQ=255) cccTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGC                                                                                                                                                     >  8:221251‑M1/1‑146 (MQ=255)   cTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGcc                                                                                                                                                >  6:205288/1‑149 (MQ=255)       gCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCcgc                                                                                                                                             >  8:39658/1‑148 (MQ=255)        cAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGa                                                                                                                                           <  1:17237/149‑1 (MQ=255)         aGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCcgcg                                                                                                                                            >  2:149769/1‑147 (MQ=255)           tcTGTGCAGAGGCAGTATAGGAAGGTGTACTTATGCCTTCCTGACTAATGGCAGATTGATTTCTAGTATTTGGTTATATCTCCAATCGCAGTGAGGAATAATTTTGGGGCCCTATTGCCTTCCTGTGGGAGCGGGCGAGCGCGCGAAGc                                                                                                                                        <  6:204867/148‑1 (MQ=255)           aCTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATTGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGa                                                                                                                                                   <  8:316701/138‑1 (MQ=255)           aCTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGa                                                                                                                                                   >  7:316701/1‑138 (MQ=255)           aCTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGc                                                                                                                                        <  4:26005/149‑1 (MQ=255)               tCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATc                                                                                                                                     >  4:32067/1‑148 (MQ=255)                     ggCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCg                                                                                                                              >  7:44362/1‑149 (MQ=255)                      gCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGACCTAATTCATTCATGAGGTAGCGGGCGAGACCGCGAAGCATCCaattccg                                                                                                                             >  7:172451/1‑143 (MQ=255)                           ataGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGa                                                                                                                         <  5:123179/148‑1 (MQ=255)                               gaaggaGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCa                                                                                                                    >  7:249352/1‑149 (MQ=255)                               gaaggaGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCa                                                                                                                    <  5:205288/149‑1 (MQ=255)                               gaaggaGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCa                                                                                                                    >  1:136871/1‑149 (MQ=255)                               gaaggaGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGCGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATc                                                                                                                                     <  4:233434/132‑1 (MQ=255)                               gaaggaGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGAGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATc                                                                                                                                     >  3:233434/1‑132 (MQ=255)                                  ggaGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCg                                                                                                                 >  3:326168/1‑149 (MQ=255)                                   gaGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCgagcccgcgaacaccggcaaagccggtggcatccacc                                                                                                                >  5:313466‑M1/1‑112 (MQ=255)                                    aGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGc                                                                                                               <  1:149769/149‑1 (MQ=255)                                            aGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGATCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCg                                                                                                        <  8:249352/148‑1 (MQ=255)                                            aGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCg                                                                                                        <  1:73424/148‑1 (MQ=255)                                             gCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGgt                                                                                                      <  3:32067/149‑1 (MQ=255)                                             gCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCGAACCAAAAAAAGCGGGGGATGCCACCCGCgtttacggg                                                                                                      >  3:181259/1‑143 (MQ=255)                                                   cTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCgagcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgc                                                                                                <  6:313466‑M1/149‑54 (MQ=255)                                                   cTGACTAATGGCAAAATGATTTATACGATTTCGTTATAACTCCAATCGCAGTGACGAATAAATTTGGGGCCCTATTGCCTTCCTGCGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTcgc                                                                                                <  3:341119/149‑1 (MQ=38)                                                      tcTAATGGCACAAGGATTTCTCCGAATTGGTGATCTCTCCCTTCGCACAGCCGAATAAATTTGGCCCCCTCATCCCTTCCTGTGGGAGCTGGCGAGCCCGCGAAGCATCCACTTCGGTGTATGCCTCGGGCTTTGCCGGTGTTAGCggg                                                                                             <  2:308399/148‑1 (MQ=255)                                                      acgaaTGGCACAATGAGTTCTTCGATTTGGATAAAACTCCTATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCGTCCTGTGGGAGCGGGCGAGGCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCgg                                                                                              <  8:322389/145‑1 (MQ=37)                                                      aCTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCggg                                                                                             <  6:164787/149‑1 (MQ=255)                                                      aCTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCgg                                                                                              <  6:71626/148‑1 (MQ=255)                                                      aCTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCgg                                                                                              <  8:44362/148‑1 (MQ=255)                                                                 aaTGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATACACTGCGGTGGATGCCACCGGCTTTTCCGGTGTTAGCGGGCGTgccccctc                                                                                  <  3:92526‑M2/149‑9 (MQ=255)                                                                          tACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgg                                                                                              <  4:180794‑M1/128‑56 (MQ=255)                                                                          tACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgg                                                                                              >  3:180794‑M1/1‑73 (MQ=255)                                                                           aCGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCGAAGCATCCACTGCGGTGGATTCCACCGGCTTTGCCCGTGTTCGCGGGCGTGCCCGCACCCCCAAgggg                                                                        >  8:216430/1‑149 (MQ=255)                                                                            tgATTTGGTTATAACTCCATTCGATGTTAGTTATAAATTTGGGGCATTAATGGCTTCGTTTGGGAGCGGGCTAGCCCGAGAAGCATCCACTGCGGTTGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAgggg                                                                        <  8:172451/147‑1 (MQ=21)                                                                                 tGGTTATAACTCAAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCgg                                                                   <  8:327530/148‑1 (MQ=255)                                                                                 gggTTATAACCCCAATCGCAGTTATCAATAATTTTGGGCCCCAAAGCCCTTCGTGTGGGTGGGGGCGCGCCGGCTATGAATCCCCTGGGGTGTTTGCCACGGGCTTGGCGGGTGTTCGGGGGCGTGCCCGCTCCCACAAGGGGCGCgg                                                                   <  2:192701/147‑1 (MQ=255)                                                                                  ggTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCggg                                                                  <  8:204222/148‑1 (MQ=255)                                                                                   gTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGCAGCATCCACAGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCCTGCCCCCTCCCCCCAGGGGCGCGGGGc                                                                >  8:104134/1‑149 (MQ=38)                                                                                   gTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCCGCTTTGCCGGTGTTAGCGGGCGTGCCCGCGCCCACAAGGGGCGCGGGGc                                                                >  5:107582/1‑149 (MQ=255)                                                                                      ataACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgct                                                                                                    <  4:128515‑M1/110‑50 (MQ=255)                                                                                      ataACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgct                                                                                                    >  3:128515‑M1/1‑61 (MQ=255)                                                                                      ataACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCCAACCAAACACAGCCGGGGCTGCCCCCCCCGATGGCCGGGTTTGCGGGCGGGGCCCCCCCCACAAAAGgggccgggcccg                                                             >  1:342115/1‑147 (MQ=255)                                                                                       taACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTgc                                                            <  2:59903/149‑1 (MQ=255)                                                                                        aaCTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACCGCAGTGGATGctt                                                                                                                    <  3:283776/92‑3 (MQ=255)                                                                                        aaCTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACCGCAGTGGATGctt                                                                                                                    >  4:283776/1‑90 (MQ=255)                                                                                               aTCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTagcca                                                    <  7:39658/149‑1 (MQ=255)                                                                                               aTCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTagcca                                                    <  2:136871/149‑1 (MQ=255)                                                                                                tCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCCGCATTTCCGGTGTTCGCCGGCGTGCCCCCTCCCACCAGGGGCGCCGGGCCTGCGCTagccag                                                   >  6:119630/1‑149 (MQ=38)                                                                                                  gCAGTGAGCAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTagccagcc                                                 <  2:367740/149‑1 (MQ=255)                                                                                                            aTAAATTGGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCAcgc                                       <  7:104134/149‑1 (MQ=255)                                                                                                                aTTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAAt                                   <  8:20592/149‑1 (MQ=255)                                                                                                                     gggCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGTGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCt                               <  4:326168/148‑1 (MQ=255)                                                                                                                          cTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCCAAGCATACACAGCGGTGGATGCCACCCGCTTTTCCGGTGTTCCCGGGCGTGCCCCCACCCACAACGGGCGCCGCGCCAGCGCTAGCCAGCCACCACCACCCGCAAGGcatgcccg                         >  6:74992/1‑142 (MQ=25)                                                                                                                                  ttCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTAGCGGGCGTGCCCGCTCCCACAAGGGGGGCGGGGCCGGCGCTAGCCAGCCCCCCGCCCGCGCATGGCGTCCAGGCGCAGggc                 >  3:87535/1‑149 (MQ=25)                                                                                                                                  ttCCTGTGGGAGCGGGCGAGCCCCCCAAGCAACCACAGCGCTGGATGCCACCCGCTTTGCCCGTGTTCGCGGGCGTGCCCCCTACCAAAAAGGGCCCCGGGCCTGCGCTAGCCAGCCACCAGCACGCGAAAGGCTTCCAGGCCCAGggc                 >  2:256687/1‑149 (MQ=37)                                                                                                                                      tgtgGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCGTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGcc             <  2:320601/149‑1 (MQ=255)                                                                                                                                        tgGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGcc             <  5:231810/147‑1 (MQ=255)                                                                                                                                           gAGGGGGCacgcccgctaacaccggaaaagccggtggcatccaccgcagtgtatgcttcgcgggctcgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttataaccaaatcgtagaaatcatt        <  3:92526‑M1/149‑142 (MQ=255)                                                                                                                                                 gCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCAt  >  3:7870/1‑149 (MQ=255)                                                                                                                                                 gCGAGCCCGCGAAGCATACACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTAGCGGGCGTGCCCCCACCCACAACGGGCGCGGGGCCAGCGCAATCCAGCCACCAGCACCCGAATTGCTTACAGGCGCAGGGCGGCCTTCTACAGCAt  >  8:294358/1‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                    CCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCAT  >  NC_002947/1311574‑1311866

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.