New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1444115	71 (1.150)	6 (0.100)	6/250	NT	8.3%	coding (71/948 nt)	PP_1262	LysR family transcriptional regulator
	?	NC_002947	= 1444148	66 (1.130)					coding (38/948 nt)	PP_1262	LysR family transcriptional regulator

GAATCTGTTCGCAACGCATCAGGTAACGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACCAAAG  >  NC_002947/1443969‑1444262                                                                                                                                                   |                                                                                                                                                     gAATCTGTTCGCAACGCATCAGGTAACGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGcgcc                                                                                                                                                    >  4:363976/1‑149 (MQ=255)      tGTTCGCAACGCATCAGGTAACGCTTGCCGGCTTCGGTCAGCTCAATGCGGCGGGTGGTAAGGTTGAGCAGACTTGTTTGCAGATGGGCTTCCAGGTTGGAGACAGCCCTCGACACGTTCTCGGTGGTAGTATACAGTTGagcagcagc                                                                                                                                               >  5:351569/1‑149 (MQ=37)       gTTCGCAACGCATCAGGTAACGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCg                                                                                                                                              >  8:202144/1‑149 (MQ=255)           gCAACGCATCAGGTAACGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAg                                                                                                                                          >  2:350926/1‑149 (MQ=255)             aaCGCATCAGGTAACGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGtagcccaactcgg                                                                                                                                         >  6:85918‑M1/1‑135 (MQ=255)              aCGCATCAGGTAACGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGa                                                                                                                                       <  2:135179/149‑1 (MQ=255)               cGCATCAGGTAACGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGaa                                                                                                                                      <  3:320461/149‑1 (MQ=255)                 cATCAGGTAACGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGc                                                                                                                                    >  6:56495/1‑149 (MQ=255)                  aTCAGGTAACGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCt                                                                                                                                   >  7:316593/1‑149 (MQ=255)                  aTCAGGTAACGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCAGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCt                                                                                                                                   >  5:98002/1‑149 (MQ=255)                     aGGTAACGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGc                                                                                                                                 <  2:72939/148‑1 (MQ=255)                      ggTAACGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGtagcccaactcggcagcttcact                                                                                                                               >  7:306317‑M1/1‑126 (MQ=255)                       gTAACGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACCCGTTCGCGGTGGTCGTATCCAGTTGCGCCGCCGCGGCAGTGAAGCTGcc                                                                                                                                >  8:302771/1‑147 (MQ=255)                             cTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑Tggg                                                                                                                       <  2:299094/149‑1 (MQ=255)                                gCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGc                                                                                                                      <  5:265680/147‑1 (MQ=255)                                 ccGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTAc                                                                                                                   <  5:87459‑M2/149‑2 (MQ=255)                                 ccGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTAc                                                                                                                   >  1:350926‑M2/1‑148 (MQ=255)                                    gCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTAcgc                                                                                                                 <  5:254640‑M2/148‑4 (MQ=255)                                        cGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGtagcccaactcggcagcttcactgccgctgcggcgcaact                                                                                                              <  8:64593‑M1/148‑41 (MQ=255)                                         ggTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGtagcccaactcggcagcttcactgccgctgcggcgcaactgg                                                                                                            <  5:85918‑M1/149‑43 (MQ=255)                                         ggTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGtagcccaactcggcagcttcactgccgctgcggcgcaactg                                                                                                             <  8:306317‑M1/148‑42 (MQ=255)                                           tCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGa                                                                                                           >  7:90513/1‑147 (MQ=255)                                             aGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAg                                                                                                        <  2:30161/148‑1 (MQ=255)                                             aGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCGTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGtagcccaactcggcagcttcactgccgctgcggcgcaactggata                                                                                                         <  7:293105‑M1/148‑46 (MQ=255)                                                 cAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACg                                                                                                    >  5:155433/1‑148 (MQ=255)                                                  aaTGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCa                                                                                                  >  3:301786/1‑149 (MQ=255)                                                      cggcggGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGt                                                                                               <  5:51013/148‑1 (MQ=255)                                                          gggTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGc                                                                                          <  6:87459/149‑1 (MQ=255)                                                           tgtggtACGGTTGAGCAGCCTTGTTTGCAGATGTGCTTCCAGTTTTGAGACAGCCCTCGAAACGTTCGCGGTGGTCTTATCCAGTTGCGCAGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACTCAACTGAAAGCACGCATGTTTTGCa                                                                                         <  6:351569/148‑1 (MQ=255)                                                             tggtACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAgg                                                                                       <  8:90513/149‑1 (MQ=255)                                                             tggtACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCCCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAgg                                                                                       <  8:86806/149‑1 (MQ=255)                                                                    gTTTAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGTCTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTcc                                                                                 <  1:74620/149‑1 (MQ=255)                                                                     ttGAGCAGCCTTGTGTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCAt                                                                               >  7:328807/1‑149 (MQ=255)                                                                        atgatccTTGGTTGCAGTTGGGGATTCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATgg                                                                             <  4:81624/143‑1 (MQ=255)                                                                        agcagcCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATgg                                                                             <  3:363976/148‑1 (MQ=255)                                                                         gcagcCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGt                                                                           >  5:204349/1‑149 (MQ=255)                                                                          cagcCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGt                                                                           >  6:45152/1‑148 (MQ=255)                                                                               ttGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑Tg                                                                                                                         >  2:81785/1‑97 (MQ=255)                                                                               ttGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑Tg                                                                                                                         <  1:81785/97‑1 (MQ=255)                                                                               ttGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGtt                                                                                              >  6:46683/1‑124 (MQ=255)                                                                               ttGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGtt                                                                                              <  5:46683/124‑1 (MQ=255)                                                                               ttGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCActct                                                                     >  8:144457/1‑149 (MQ=255)                                                                                     gCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAgg                                                                >  7:194621/1‑148 (MQ=255)                                                                                      cAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTa                                                              <  8:328807/149‑1 (MQ=255)                                                                                       aGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAgg                                                                >  8:74988/1‑146 (MQ=255)                                                                                         aTGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTagag                                                           >  5:388298/1‑149 (MQ=255)                                                                                         aTGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGAACGCATGTTTTGCAGTGTGTCCATGGTTCACTCTCGAGGTagag                                                           <  6:98002/149‑1 (MQ=255)                                                                                            ggCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGa                                                         >  3:260176/1‑148 (MQ=255)                                                                                              cTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACa                                                       >  7:272258/1‑148 (MQ=255)                                                                                               ttCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCAGGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACaa                                                      >  7:346955/1‑148 (MQ=255)                                                                                                    ggTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATtgt                                                <  7:202144/149‑1 (MQ=255)                                                                                                     gTTGGAGACCGCCCGCGACACTTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TTGTCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATtgtg                                               <  8:316593/149‑1 (MQ=255)                                                                                                     gTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTaga                                                            <  7:229/136‑1 (MQ=255)                                                                                                     gTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTaga                                                            >  8:229/1‑136 (MQ=255)                                                                                                        ggAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTc                                             <  3:235645/148‑1 (MQ=255)                                                                                                        ggAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTc                                             <  4:260176/148‑1 (MQ=255)                                                                                                          agaCCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACg                                          <  6:204349/149‑1 (MQ=255)                                                                                                           gaCCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACg                                          >  6:224271/1‑148 (MQ=255)                                                                                                            aCCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTTACTCTCGAGGTAGAGGACAAAATTGTGTCACGaa                                        <  4:301786/149‑1 (MQ=255)                                                                                                            aCCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGaa                                        <  7:144457/149‑1 (MQ=255)                                                                                                            aCCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGaa                                        <  5:45152/149‑1 (MQ=255)                                                                                                                  cgcgACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACt                                  >  2:167949/1‑149 (MQ=255)                                                                                                                   gcgACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACtt                                 <  5:56495/149‑1 (MQ=255)                                                                                                                        acGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAgg                                                                                       <  2:12431/90‑1 (MQ=255)                                                                                                                        acGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAgg                                                                                       >  1:12431/1‑90 (MQ=255)                                                                                                                        acGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGaaa                            <  6:254640/149‑1 (MQ=255)                                                                                                                        acGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGaa                             >  1:267768/1‑148 (MQ=255)                                                                                                                         cGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGaaaa                           <  8:272258/149‑1 (MQ=255)                                                                                                                              gcgGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAgaga                       >  2:304818/1‑148 (MQ=255)                                                                                                                                    gtCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGtt                <  8:194621/149‑1 (MQ=255)                                                                                                                                      cGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGc              >  7:317415/1‑149 (MQ=255)                                                                                                                                       gTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGc              <  5:305306/148‑1 (MQ=255)                                                                                                                                        tATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTAcgcaactggatacgaccaccgcgaacgtgtcgcgggcggtctccaacctggacgcccatctgcaaacaaggctgctcaaccgtaccacccgccgcattgcgct             <  7:293105‑M2/148‑104 (MQ=255)                                                                                                                                        tATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCt            >  5:43059/1‑149 (MQ=255)                                                                                                                                         aTCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACtt                                 <  4:47829/127‑1 (MQ=255)                                                                                                                                         aTCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACtt                                 >  3:47829/1‑127 (MQ=255)                                                                                                                                          tCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTATTGCAGGGTGTCCATGGCTCACTCTCGAGCTAGAGGACAAAATTCTGTCACGAAGTAACATGGAAAAGAGAAAAAGTTGCCTTc          >  8:122368/1‑149 (MQ=255)                                                                                                                                           ccAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTAcgcaactggatacgaccaccgcgaacgtgtcgcgggcggtctccaacctggaagcccatctgcaaacaaggctgctcaaccgtaccacccgccgcattgcgctgacc         <  5:85918‑M2/149‑108 (MQ=255)                                                                                                                                           ccAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTc          <  7:74988/148‑1 (MQ=255)                                                                                                                                           ccAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACGTGGAAAAGAGAAAAAGTTGCCTTc          >  5:290096/1‑148 (MQ=255)                                                                                                                                            cAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTAcgcaactggatacgaccaccgcgaacgtgtcgcgggcggtctccaacctggaagcccatctgcaaacaaggctgctcaaccgtaccacccgccgcattgcgctgacc         <  8:306317‑M2/148‑108 (MQ=255)                                                                                                                                            cAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGa        <  1:304818/149‑1 (MQ=255)                                                                                                                                             aGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTAcgcaactggatacgaccaccgcgaacgtgtcgcgggcggtctccaacctggaagcccatctgcaaacaaggctgctcaaccgtaccacccgccgcattgcgctgaccg        <  8:64593‑M2/148‑109 (MQ=255)                                                                                                                                             aGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGAc       >  8:225558/1‑149 (MQ=255)                                                                                                                                             aGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGAc       >  1:333476/1‑149 (MQ=255)                                                                                                                                                 gCGtagcccaactcggcagcttcactgccgctgcggcgcaactggatacgaccaccgcgaacgtgtcgcgggcggtctccaacctggaagcccatctgcaaacaaggctgctcaaccgtaccacccgccgcattgcgctgaccgaagc     <  5:254640‑M1/148‑146 (MQ=255)                                                                                                                                                   gtagcccaactcggcagcttcactgccgctgcggcgcaactggatacgaccaccgcgaacgtgtcgcgggcggtctccaacctggaagcccatctgcaaacaaggctgctcaaccgtaccacccgccgcattgcgctgaccgaagccgg  <  5:87459‑M1/149‑149 (MQ=255)                                                                                                                                                   gtagcccaactcggcagcttcactgccgctgcggcgcaactggatacgaccaccgcgaacgtgtcgcgggcggtctccaacctggaagcccatctgcaaacaaggctgctcaaccgtaccacccgccgcattgcgctgaccgaagccgg  >  1:350926‑M1/1‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                     GAATCTGTTCGCAACGCATCAGGTAACGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACCAAAG  >  NC_002947/1443969‑1444262

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.