New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1444115	71 (1.150)	6 (0.100)	6/250	NT	8.3%	coding (71/948 nt)	PP_1262	LysR family transcriptional regulator
	?	NC_002947	= 1444148	66 (1.130)					coding (38/948 nt)	PP_1262	LysR family transcriptional regulator

CCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACCAAAGGCGGATTATCGCTGTTTTGGTAACAAAGATT  >  NC_002947/1444001‑1444293                                                                                                                                                     |                                                                                                                                                  ccGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTAc                                                                                                                                                  <  5:87459‑M2/149‑2 (MQ=255) ccGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTAc                                                                                                                                                  >  1:350926‑M2/1‑148 (MQ=255)    gCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTAcgc                                                                                                                                                <  5:254640‑M2/148‑4 (MQ=255)           tCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGa                                                                                                                                          >  7:90513/1‑147 (MQ=255)             aGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAg                                                                                                                                       <  2:30161/148‑1 (MQ=255)                 cAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACg                                                                                                                                   >  5:155433/1‑148 (MQ=255)                  aaTGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCa                                                                                                                                 >  3:301786/1‑149 (MQ=255)                      cggcggGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGt                                                                                                                              <  5:51013/148‑1 (MQ=255)                          gggTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGc                                                                                                                         <  6:87459/149‑1 (MQ=255)                           tgtggtACGGTTGAGCAGCCTTGTTTGCAGATGTGCTTCCAGTTTTGAGACAGCCCTCGAAACGTTCGCGGTGGTCTTATCCAGTTGCGCAGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACTCAACTGAAAGCACGCATGTTTTGCa                                                                                                                        <  6:351569/148‑1 (MQ=255)                             tggtACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAgg                                                                                                                      <  8:90513/149‑1 (MQ=255)                             tggtACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCCCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAgg                                                                                                                      <  8:86806/149‑1 (MQ=255)                                    gTTTAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGTCTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTcc                                                                                                                <  1:74620/149‑1 (MQ=255)                                     ttGAGCAGCCTTGTGTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCAt                                                                                                              >  7:328807/1‑149 (MQ=255)                                        atgatccTTGGTTGCAGTTGGGGATTCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATgg                                                                                                            <  4:81624/143‑1 (MQ=255)                                        agcagcCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATgg                                                                                                            <  3:363976/148‑1 (MQ=255)                                         gcagcCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGt                                                                                                          >  5:204349/1‑149 (MQ=255)                                          cagcCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGt                                                                                                          >  6:45152/1‑148 (MQ=255)                                               ttGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGtt                                                                                                                             >  6:46683/1‑124 (MQ=255)                                               ttGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGtt                                                                                                                             <  5:46683/124‑1 (MQ=255)                                               ttGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCActct                                                                                                    >  8:144457/1‑149 (MQ=255)                                                     gCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAgg                                                                                               >  7:194621/1‑148 (MQ=255)                                                      cAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTa                                                                                             <  8:328807/149‑1 (MQ=255)                                                       aGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAgg                                                                                               >  8:74988/1‑146 (MQ=255)                                                         aTGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTagag                                                                                          >  5:388298/1‑149 (MQ=255)                                                         aTGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGAACGCATGTTTTGCAGTGTGTCCATGGTTCACTCTCGAGGTagag                                                                                          <  6:98002/149‑1 (MQ=255)                                                            ggCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGa                                                                                        >  3:260176/1‑148 (MQ=255)                                                              cTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACa                                                                                      >  7:272258/1‑148 (MQ=255)                                                               ttCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCAGGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACaa                                                                                     >  7:346955/1‑148 (MQ=255)                                                                    ggTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATtgt                                                                               <  7:202144/149‑1 (MQ=255)                                                                     gTTGGAGACCGCCCGCGACACTTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TTGTCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATtgtg                                                                              <  8:316593/149‑1 (MQ=255)                                                                     gTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTaga                                                                                           <  7:229/136‑1 (MQ=255)                                                                     gTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTaga                                                                                           >  8:229/1‑136 (MQ=255)                                                                        ggAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTc                                                                            <  3:235645/148‑1 (MQ=255)                                                                        ggAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTc                                                                            <  4:260176/148‑1 (MQ=255)                                                                          agaCCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACg                                                                         <  6:204349/149‑1 (MQ=255)                                                                           gaCCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACg                                                                         >  6:224271/1‑148 (MQ=255)                                                                            aCCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTTACTCTCGAGGTAGAGGACAAAATTGTGTCACGaa                                                                       <  4:301786/149‑1 (MQ=255)                                                                            aCCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGaa                                                                       <  5:45152/149‑1 (MQ=255)                                                                            aCCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGaa                                                                       <  7:144457/149‑1 (MQ=255)                                                                                  cgcgACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACt                                                                 >  2:167949/1‑149 (MQ=255)                                                                                   gcgACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACtt                                                                <  5:56495/149‑1 (MQ=255)                                                                                        acGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAgg                                                                                                                      <  2:12431/90‑1 (MQ=255)                                                                                        acGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAgg                                                                                                                      >  1:12431/1‑90 (MQ=255)                                                                                        acGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGaaa                                                           <  6:254640/149‑1 (MQ=255)                                                                                        acGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGaa                                                            >  1:267768/1‑148 (MQ=255)                                                                                         cGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGaaaa                                                          <  8:272258/149‑1 (MQ=255)                                                                                              gcgGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAgaga                                                      >  2:304818/1‑148 (MQ=255)                                                                                                    gtCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGtt                                               <  8:194621/149‑1 (MQ=255)                                                                                                      cGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGc                                             >  7:317415/1‑149 (MQ=255)                                                                                                       gTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGc                                             <  5:305306/148‑1 (MQ=255)                                                                                                        tATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTAcgcaactggatacgaccaccgcgaacgtgtcgcgggcggtctccaacctggacgcccatctgcaaacaaggctgctcaaccgtaccacccgccgcattgcgct                                            <  7:293105‑M2/148‑104 (MQ=255)                                                                                                        tATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCt                                           >  5:43059/1‑149 (MQ=255)                                                                                                         aTCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACtt                                                                >  3:47829/1‑127 (MQ=255)                                                                                                         aTCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACtt                                                                <  4:47829/127‑1 (MQ=255)                                                                                                          tCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTATTGCAGGGTGTCCATGGCTCACTCTCGAGCTAGAGGACAAAATTCTGTCACGAAGTAACATGGAAAAGAGAAAAAGTTGCCTTc                                         >  8:122368/1‑149 (MQ=255)                                                                                                           ccAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTAcgcaactggatacgaccaccgcgaacgtgtcgcgggcggtctccaacctggaagcccatctgcaaacaaggctgctcaaccgtaccacccgccgcattgcgctgacc                                        <  5:85918‑M2/149‑108 (MQ=255)                                                                                                           ccAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTc                                         <  7:74988/148‑1 (MQ=255)                                                                                                           ccAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACGTGGAAAAGAGAAAAAGTTGCCTTc                                         >  5:290096/1‑148 (MQ=255)                                                                                                            cAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTAcgcaactggatacgaccaccgcgaacgtgtcgcgggcggtctccaacctggaagcccatctgcaaacaaggctgctcaaccgtaccacccgccgcattgcgctgacc                                        <  8:306317‑M2/148‑108 (MQ=255)                                                                                                            cAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGa                                       <  1:304818/149‑1 (MQ=255)                                                                                                             aGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTAcgcaactggatacgaccaccgcgaacgtgtcgcgggcggtctccaacctggaagcccatctgcaaacaaggctgctcaaccgtaccacccgccgcattgcgctgaccg                                       <  8:64593‑M2/148‑109 (MQ=255)                                                                                                             aGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGAc                                      >  1:333476/1‑149 (MQ=255)                                                                                                             aGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGAc                                      >  8:225558/1‑149 (MQ=255)                                                                                                                    ccgcAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACCAAAGGc                               <  6:43059/149‑1 (MQ=255)                                                                                                                       cAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACCAAAGGCGGa                            >  7:327342/1‑149 (MQ=255)                                                                                                                           ggCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACCAAAGGCGGATTAt                        >  5:318459/1‑149 (MQ=255)                                                                                                                           ggCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACCAAAGGCGGATTAt                        >  7:185995/1‑149 (MQ=255)                                                                                                                            gCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACCAAAGGCGGATTATc                       <  7:225558/149‑1 (MQ=255)                                                                                                                              aGTGAAGCTGCCGAGT‑TGGGCTAcgcaactggatacgaccaccgcgaacgtgtcgcgggcggtctccaacctggaagcccatctgcaaacaaggctgctcaaccgtaccacccgccgcattgcgctgaccgaagccggcaagcgttacc                     >  7:306317‑M2/1‑23 (MQ=255)                                                                                                                               gTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACCAAAGGCGGATTATCGCt                    >  7:219525/1‑149 (MQ=255)                                                                                                                                 gAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACCAAAGGCGGATTATCGCTGt                  >  7:339027/1‑149 (MQ=255)                                                                                                                                       gCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACCAAAGGCGGATTATCGCTGTTTTgg             >  1:73782/1‑148 (MQ=255)                                                                                                                                        ccGAGT‑TGGGCTAcgcaactggatacgaccaccgcgaacgtgtcgcgggcggtctccaacctggaagcccatctgcaaacaaggctgctcaaccgtaccacccgccgcattgcgctgaccgaagccggcaagcgttacctgatgcgtt            >  6:85918‑M2/1‑13 (MQ=255)                                                                                                                                        ccGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACCAAAGGCGGATTATCGCTGTTTTgg             <  6:260455/147‑1 (MQ=255)                                                                                                                                        ccGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACCAAAGGCGGATTATCGCTGTTTTgg             >  5:260455/1‑147 (MQ=255)                                                                                                                                          gAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACCAAAGGCGGATTATCGCTGTTTTGGTaa          >  5:306477/1‑148 (MQ=255)                                                                                                                                                 ggCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACCAAAGGCGGATTATCGCTGTTTTGGTAACAAAGAt   <  6:388298/149‑1 (MQ=255)                                                                                                                                                  gCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACCAAAGGCGGATTATCGCTGTTTTGGTAACAAAGAtt  >  8:144892/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                  CCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCAGTGAAGCTGCCGAGT‑TGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACCAAAGGCGGATTATCGCTGTTTTGGTAACAAAGATT  >  NC_002947/1444001‑1444293

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.