New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1521351	54 (0.870)	3 (0.050)	3/246	NT	5.4%	coding (608/1353 nt)	murD	UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
	?	NC_002947	= 1521377	56 (0.980)					coding (634/1353 nt)	murD	UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase

CCGATGACATCGAGCTGTACGTGCTGGAGCTTTCCAGCTTCCAGCTGGAAACCACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTG  >  NC_002947/1521207‑1521496                                                                                                                                                 |                                                                                                                                                  ccGATGACATCGAGCTGTACGTGCTGGAGCTTTCCAGCTTCCAGCTGGAAACCACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCaaa                                                                                                                                               >  6:71659/1‑149 (MQ=255) ccGATGACATCGAGCTGTACGTGCTGGAGCTTTCCAGCTTCCAGCTGGAAACCACAGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCACCGAAGACCACATCGACCGCTATAGCGGCCTACCGGCCTACCACCTGGCCaaa                                                                                                                                               <  5:232749/149‑1 (MQ=255)       aCATCGAGCTGTACGTGCTGGAGCTTTCCAGCTTCCAGCTGGAAACCACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCg                                                                                                                                          >  8:131613/1‑148 (MQ=255)       aCATCGAGCTGTACGTGCTGGAGCTTTCCAGCTTCCAGCTGGAAACCACTGACCAGCTCAACGCCGAAGGGGCGACCGTTCTGAACATCACCGAAGACCACATGTACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACAcc                                                                                                                                           <  4:171131/147‑1 (MQ=255)          tCGAGCTGTACGTGCTGGAGCTTTCCAGCTTCCAGCTGGAAACCACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGAtt                                                                                                                                      >  4:101621/1‑149 (MQ=255)               cTGTACGTGCTGGAGCTTTCCAGCTTCCAGCTGGAAACCACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCcg                                                                                                                                 >  4:135668/1‑149 (MQ=255)                 gTACGTGCTGGAGCTTTCCAGCTTCCAGCTGGAAACCACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCcgcg                                                                                                                               >  6:227667/1‑149 (MQ=255)                        cTGGAGCTTTCCAGCTTCCAGCTGGAAACCACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGccc                                                                                                                         <  3:120196/148‑1 (MQ=255)                           gagaTTTCCAGCTTCCAGCTGGTAAGCACTGACCAGCTCATCGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTCGCCAAAAACCGGATTTTCCGCGGTGCCCTcc                                                                                                                      <  2:35452/148‑1 (MQ=255)                           gAGCTTTCCAGCTTCCAGCTGGAAACCACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCgcca                                                                                                                     >  5:10737‑M2/1‑145 (MQ=255)                             gCTTTCCAGCTTCCAGCTGGAAACCACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCgggcaccgcggaaaatccggtgtttggccagg                                                                                                                   <  3:341494‑M1/149‑33 (MQ=255)                               tttCCAGCTTCCAGCTGGAAACCACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCgggcaccgcggaaaatccggtgtttggccaggtg                                                                                                                 >  1:199272‑M1/1‑115 (MQ=255)                               tttCCAGCTGGAAGCTGGAAACCACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCgccaggtg                                                                                                                 <  1:284127‑M2/149‑9 (MQ=255)                                    agcttccagctGGAAACCACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAggtggtggt                                                                                                            >  3:345915/1‑149 (MQ=255)                                     gcttccagctGGAAACCACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAggtggtggt                                                                                                            >  3:194893/1‑148 (MQ=255)                                      cttccagctGGAAACCACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCgggcaccgcggaaaatccggtgtttggccaggtggtaggcc                                                                                                          <  2:199272‑M1/149‑42 (MQ=255)                                          cagctGGAAACCACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAAcc                                                                                                       <  2:368658/148‑1 (MQ=255)                                           agctGGAAACCACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGc                                                                                                     >  6:141229/1‑149 (MQ=255)                                                 aaaCCACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGAc                                                                                               <  5:141229/149‑1 (MQ=255)                                                          aCCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAgc                                                                                      >  2:359971/1‑149 (MQ=255)                                                             aGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAgccgg                                                                                   <  3:101621/149‑1 (MQ=255)                                                             aGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAgccgg                                                                                   >  8:129439/1‑149 (MQ=255)                                                              gCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAgccggc                                                                                  <  4:345915/149‑1 (MQ=255)                                                               cTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAgccggcc                                                                                 >  1:145675/1‑149 (MQ=255)                                                                 cAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGc                                                                               >  2:100728/1‑149 (MQ=255)                                                                     gCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGcc                                                                           >  3:35556/1‑149 (MQ=255)                                                                     gCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGcc                                                                           <  2:315239/149‑1 (MQ=255)                                                                      ccGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCg                                                                          >  5:179892/1‑149 (MQ=255)                                                                       cGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCgg                                                                         <  3:69395/149‑1 (MQ=255)                                                                        gAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGt                                                                        <  4:1102/149‑1 (MQ=255)                                                                              gCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAgg                                                                  >  6:380384/1‑149 (MQ=255)                                                                              gCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAg                                                                   <  2:284127/148‑1 (MQ=255)                                                                                gACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGcc                                                                >  6:172941/1‑149 (MQ=255)                                                                                        tGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGc                                                        >  5:113944/1‑149 (MQ=255)                                                                                          aaCATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGc                                                        <  1:359971/147‑1 (MQ=255)                                                                                          aaCATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTg                                                      <  3:135668/149‑1 (MQ=255)                                                                                           aCATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTg                                                      <  4:35556/148‑1 (MQ=255)                                                                                             aTCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGAc                                                   >  7:69524/1‑149 (MQ=255)                                                                                               cAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCt                                                 >  2:160953/1‑149 (MQ=255)                                                                                                aGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCtt                                                >  8:180224/1‑149 (MQ=255)                                                                                                 gCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTc                                               >  5:136059/1‑149 (MQ=255)                                                                                                  cGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCg                                              <  6:113944/149‑1 (MQ=255)                                                                                                    aaGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGc                                            <  6:136059/149‑1 (MQ=255)                                                                                                    aaGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGc                                            <  8:69524/149‑1 (MQ=255)                                                                                                          acaTGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAAc                                      <  5:71659/149‑1 (MQ=255)                                                                                                          acaTGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAAc                                      <  4:98564/149‑1 (MQ=255)                                                                                                               gACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAgg                                                                  <  7:60308/116‑1 (MQ=255)                                                                                                               gACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGGGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAgg                                                                  >  8:60308/1‑116 (MQ=255)                                                                                                                aCCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCt                                                       <  8:220599/126‑1 (MQ=255)                                                                                                                aCCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCt                                                       >  7:220599/1‑126 (MQ=255)                                                                                                                 ccGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAAcccgccc                                >  5:347600/1‑148 (MQ=255)                                                                                                                    cTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACt                            >  7:303738/1‑149 (MQ=255)                                                                                                                       taGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACtt                           <  7:131613/147‑1 (MQ=255)                                                                                                                         gCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCaaa                       <  6:179892/149‑1 (MQ=255)                                                                                                                         gCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCaaa                       <  5:227667/149‑1 (MQ=255)                                                                                                                            gCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCg                    >  5:74982/1‑149 (MQ=255)                                                                                                                            gCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGACAACCGCCAGGACGCCCTCACCCGGCCCATGCCGTTGAAAGGCCGTCCATGATGCACATACGCCCACAACCCGCCCCACTTAAAAGCg                    >  2:309645/1‑149 (MQ=255)                                                                                                                              cTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGtt                  >  6:143544/1‑149 (MQ=255)                                                                                                                                 ccGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGttt                 <  5:172941/147‑1 (MQ=255)                                                                                                                                  cGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGTTTgg               <  8:318048/148‑1 (MQ=255)                                                                                                                                   ggCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCgccaggtggtaggccggaaggccgctatagcggtccatgtggtcttcgctgatgttcagaacggtcgccacttcggcgttgagctggtcagtggtttccagctggaag             <  2:199272‑M2/149‑109 (MQ=255)                                                                                                                                    gCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGTTTGGCCt            <  7:129439/149‑1 (MQ=255)                                                                                                                                          caccTGGCgggcaccgcggaaaatccggtgtttggccaggtggtaggccggaaggccgctatagcggtccatgtggtcttcgctgatgttcagaacggtcgccacttcggcgttgagctggtcagtggtttccagcttccagctggaaa      <  1:284127‑M1/149‑142 (MQ=255)                                                                                                                                          caccTGGCCAAACACCGGATTTTCCGCGGTGCCCgccaggtggtaggccggaaggccgctatagcggtccatgtggtcttcgctgatgttcagaacggtcgccacttcggcgttgagctggtcagtggtttccagctggaagctggaaa      >  1:199272‑M2/1‑34 (MQ=255)                                                                                                                                            ccTGGCCAAACACCGGATTTTCCGCGGTGCCCgccaggtggtaggccggaaggccgctatagcggtccatgtggtcttcgctgatgttcagaacggtcgccacttcggcgttgagctggtcagtggtttccagctggaagctggaaagc    <  3:341494‑M2/149‑118 (MQ=255)                                                                                                                                             cTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGt   >  5:200348/1‑149 (MQ=255)                                                                                                                                              tGGCgggcaccgcggaaaatccggtgtttggccaggtggtaggccggaaggccgctatagcggtccatgtggtcttcgctgatgttcagaacggtcgccacttcggcgttgagctggtcagtggtttccagctggaagctggaaagctc  >  5:10737‑M1/1‑4 (MQ=255)                                                                                                                                              tGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTg  >  5:309007/1‑149 (MQ=255)                                                                                                                                                gCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTg  <  1:152886/147‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                  CCGATGACATCGAGCTGTACGTGCTGGAGCTTTCCAGCTTCCAGCTGGAAACCACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTG  >  NC_002947/1521207‑1521496

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.