New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1521351	54 (0.870)	3 (0.050)	3/246	NT	5.4%	coding (608/1353 nt)	murD	UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
	?	NC_002947	= 1521377	56 (0.980)					coding (634/1353 nt)	murD	UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase

CTGGAGCTTTCCAGCTTCCAGCTGGAAACCACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAA‑CCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTGGACGGTGAGAAATACCT  >  NC_002947/1521230‑1521513                                                                                                                                                    |                                                                                                                                          cTGGAGCTTTCCAGCTTCCAGCTGGAAACCACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGccc                                                                                                                                           <  3:120196/148‑1 (MQ=255)    gagaTTTCCAGCTTCCAGCTGGTAAGCACTGACCAGCTCATCGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTCGCCAAAAACCGGATTTTCCGCGGTGCCCTcc                                                                                                                                        <  2:35452/148‑1 (MQ=255)    gAGCTTTCCAGCTTCCAGCTGGAAACCACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCgcca                                                                                                                                       >  5:10737‑M2/1‑145 (MQ=255)        tttCCAGCTGGAAGCTGGAAACCACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCgccaggtg                                                                                                                                   <  1:284127‑M2/149‑9 (MQ=255)             agcttccagctGGAAACCACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAggtggtggt                                                                                                                              >  3:345915/1‑149 (MQ=255)              gcttccagctGGAAACCACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAggtggtggt                                                                                                                              >  3:194893/1‑148 (MQ=255)                   cagctGGAAACCACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAAcc                                                                                                                         <  2:368658/148‑1 (MQ=255)                    agctGGAAACCACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGc                                                                                                                       >  6:141229/1‑149 (MQ=255)                          aaaCCACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGAc                                                                                                                 <  5:141229/149‑1 (MQ=255)                                   aCCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAgc                                                                                                        >  2:359971/1‑149 (MQ=255)                                      aGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAgccgg                                                                                                     >  8:129439/1‑149 (MQ=255)                                      aGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAgccgg                                                                                                     <  3:101621/149‑1 (MQ=255)                                       gCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAgccggc                                                                                                    <  4:345915/149‑1 (MQ=255)                                        cTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAgccggcc                                                                                                   >  1:145675/1‑149 (MQ=255)                                          cAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGc                                                                                                 >  2:100728/1‑149 (MQ=255)                                              gCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGcc                                                                                             <  2:315239/149‑1 (MQ=255)                                              gCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGcc                                                                                             >  3:35556/1‑149 (MQ=255)                                               ccGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCg                                                                                            >  5:179892/1‑149 (MQ=255)                                                cGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCgg                                                                                           <  3:69395/149‑1 (MQ=255)                                                 gAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGt                                                                                          <  4:1102/149‑1 (MQ=255)                                                       gCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAgg                                                                                    >  6:380384/1‑149 (MQ=255)                                                       gCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAg                                                                                     <  2:284127/148‑1 (MQ=255)                                                         gACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGcc                                                                                  >  6:172941/1‑149 (MQ=255)                                                                 tGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGc                                                                          >  5:113944/1‑149 (MQ=255)                                                                   aaCATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGc                                                                          <  1:359971/147‑1 (MQ=255)                                                                   aaCATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTg                                                                        <  3:135668/149‑1 (MQ=255)                                                                    aCATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTg                                                                        <  4:35556/148‑1 (MQ=255)                                                                      aTCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGAc                                                                     >  7:69524/1‑149 (MQ=255)                                                                        cAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCt                                                                   >  2:160953/1‑149 (MQ=255)                                                                         aGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCtt                                                                  >  8:180224/1‑149 (MQ=255)                                                                          gCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTc                                                                 >  5:136059/1‑149 (MQ=255)                                                                           cGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCg                                                                <  6:113944/149‑1 (MQ=255)                                                                             aaGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGc                                                              <  8:69524/149‑1 (MQ=255)                                                                             aaGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGc                                                              <  6:136059/149‑1 (MQ=255)                                                                                   acaTGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAA‑c                                                       <  4:98564/149‑1 (MQ=255)                                                                                   acaTGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAA‑c                                                       <  5:71659/149‑1 (MQ=255)                                                                                        gACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAgg                                                                                    <  7:60308/116‑1 (MQ=255)                                                                                        gACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGGGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAgg                                                                                    >  8:60308/1‑116 (MQ=255)                                                                                         aCCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCt                                                                         <  8:220599/126‑1 (MQ=255)                                                                                         aCCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCt                                                                         >  7:220599/1‑126 (MQ=255)                                                                                          ccGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAA‑cccgccc                                                 >  5:347600/1‑148 (MQ=255)                                                                                             cTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAA‑CCCGCCCGACt                                             >  7:303738/1‑149 (MQ=255)                                                                                                taGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAA‑CCCGCCCGACtt                                            <  7:131613/147‑1 (MQ=255)                                                                                                  gCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAA‑CCCGCCCGACTTCaaa                                        <  5:227667/149‑1 (MQ=255)                                                                                                  gCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAA‑CCCGCCCGACTTCaaa                                        <  6:179892/149‑1 (MQ=255)                                                                                                     gCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAA‑CCCGCCCGACTTCAAAGCg                                     >  5:74982/1‑149 (MQ=255)                                                                                                     gCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGACAACCGCCAGGACGCCCTCACCCGGCCCATGCCGTTGAAAGGCCGTCCATGATGCACATACGCCCACAA‑CCCGCCCCACTTAAAAGCg                                     >  2:309645/1‑149 (MQ=255)                                                                                                       cTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAA‑CCCGCCCGACTTCAAAGCGtt                                   >  6:143544/1‑149 (MQ=255)                                                                                                          ccGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAA‑CCCGCCCGACTTCAAAGCGttt                                  <  5:172941/147‑1 (MQ=255)                                                                                                           cGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAA‑CCCGCCCGACTTCAAAGCGTTTgg                                <  8:318048/148‑1 (MQ=255)                                                                                                            ggCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCgccaggtggtaggccggaaggccgctatagcggtccatgtggtcttcgctgatgttcagaacggtcgccacttcggcgttgagctggtcagtggtttccagctggaag                               <  2:199272‑M2/149‑109 (MQ=255)                                                                                                             gCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAA‑CCCGCCCGACTTCAAAGCGTTTGGCCt                             <  7:129439/149‑1 (MQ=255)                                                                                                                   caccTGGCCAAACACCGGATTTTCCGCGGTGCCCgccaggtggtaggccggaaggccgctatagcggtccatgtggtcttcgctgatgttcagaacggtcgccacttcggcgttgagctggtcagtggtttccagctggaagctggaaa                        >  1:199272‑M2/1‑34 (MQ=255)                                                                                                                     ccTGGCCAAACACCGGATTTTCCGCGGTGCCCgccaggtggtaggccggaaggccgctatagcggtccatgtggtcttcgctgatgttcagaacggtcgccacttcggcgttgagctggtcagtggtttccagctggaagctggaaagc                      <  3:341494‑M2/149‑118 (MQ=255)                                                                                                                      cTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAA‑CCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGt                    >  5:200348/1‑149 (MQ=255)                                                                                                                       tGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAA‑CCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTg                   >  5:309007/1‑149 (MQ=255)                                                                                                                         gCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAA‑CCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTg                   <  1:152886/147‑1 (MQ=255)                                                                                                                               cacCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAA‑CCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTGGACGGTga           <  6:74982/149‑1 (MQ=255)                                                                                                                               cacCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAA‑CCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTGGACGGTga           >  5:122859/1‑149 (MQ=255)                                                                                                                                acCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAA‑CCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTGGACGGt             >  5:342203/1‑146 (MQ=255)                                                                                                                                  cGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAA‑CCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTGGACGGTgaga         >  3:184370/1‑148 (MQ=255)                                                                                                                                      ttttCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAA‑CCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTGGACGGTGAGAAATAc    <  7:180224/149‑1 (MQ=255)                                                                                                                                         ccgccgGTG‑CCGCCATGTTGTTGTTAAACGGCACGTCGGCCTGACCCGGGCGGTGGCGGTTGTATGCCGTTCATTGTTGTACTTTGGGCTCAATCCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTGGACGGTGAGAAATACCt  <  1:100728/144‑1 (MQ=255)                                                                                                                                               gTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAA‑CCCGCCCGACt                                             <  2:151741/99‑1 (MQ=255)                                                                                                                                               gTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAA‑CCCGCCCGACt                                             >  1:151741/1‑99 (MQ=255)                                                                                                                                                   ccGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAA‑CCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTGGACGGTGAGAAATAcc   >  6:90609/1‑137 (MQ=255)                                                                                                                                                   ccGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAA‑CCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTGGACGGTGAGAAATAcc   <  5:90609/137‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                          CTGGAGCTTTCCAGCTTCCAGCTGGAAACCACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAGCGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGGTGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAA‑CCCGCCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTGGACGGTGAGAAATACCT  >  NC_002947/1521230‑1521513

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.