New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1947103 =	45 (0.730)	4 (0.070)	4/248	NT	9.2%	coding (637/1185 nt)	PP_1748	hypothetical protein
	?	NC_002947	1947144 =	37 (0.640)					coding (596/1185 nt)	PP_1748	hypothetical protein

GACCGCATGCTCGCTGGAAGCCTGCCCGGGCGCCACCGGGGCGATGTCGATGCCGACGAACTCGCTGACGTCCCAGGGCAGGGCGCCGGCTGCACCCGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGCCGCTACGCCAGCCTTGTCGTCCAGGTGACGGGCGCTGATGTGGCCGCTTTCGGTGAACTCGGGCAATGGGTCGAAGGCCACGAAATCACCAATGCTCACGCC  >  NC_002947/1946957‑1947250                                                                                                                                                   |                                                                                                                                                    gatgcctactgcgccacgcgcgctgactgtgaggcactgggcgtgagcattggtgatttcgtggccttcgacccattgcccgagttcaccgaaagcggccacatcagcgcccgtcacctggacgacaaggctggcgtagcggcattg                                                                                                                                                     >  5:247645‑M1/147‑147 (MQ=255) gatgcctactgcgccacgcgcgctgactgtgaggcactgggcgtgagcattggtgatttcgtggccttcgacccattgcccgagttcaccgaaagcggccacatcagcgcccgtcacctggacgacaaggctggcgtagcggcattg                                                                                                                                                     >  3:126422‑M1/147‑147 (MQ=255)  aCCGCATGCTCGCTGGAAGCCTGCCCGGGCGCCACCGGGGCGATGTCGATGGCGATGAACTCGCTGACGTCCCAGGGCAGGGCGCCGGCTGCACCCGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTg                                                                                                                                                  <  1:283998/149‑1 (MQ=255)   ccGCATGCTCGCTGGAAGCCTGCCCGGGCGCCACCGGGGCGATGTCGATGCCGACGAACTCGCTGACGTCCCAGGGCAGGGCGCCGGCTGCACCCGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTg                                                                                                                                                  <  6:63399/148‑1 (MQ=255)     cctactgcgccacgcgcgctgactgtgaggcactgggcgtgagcattggtgatttcgtggccttcgacccattgcccgagttcaccgaaagctgccacatcagcgcccgtcacctggacgacaaggctggcgtagcggcattGCTggc                                                                                                                                                >  4:195605‑M1/143‑148 (MQ=255)      ctactgcgccacgcgcgctgactgtgaggcactgggcgtgagcattggtgatttcgtggccttcgacccattgcccgagttcaccgaaagcggccacatcagcgcccgtcacctggacgacaaggctggcgtagcggcattGCTggcgg                                                                                                                                              <  4:330627‑M1/8‑1 (MQ=255)       tactgcgccacgcgcgctgactgtgaggcactgggcgtgagcattggtgatttcgtggccttcgacccattgcccgagttcaccgaacgcggccacatcagcgcccgtcacctggacgacaaggctggcgtagcggcattGCTggcggc                                                                                                                                             <  3:218283‑M1/9‑1 (MQ=255)       tactgcgccacgcgcgctgactgtgaggcactgggcgtgagcattggtgatttcgtggccttcgacccattgcccgagttcaccgaaagcggccacatcagcgcccgtcacctggacgacaaggctggcgtagcggcattGCTggcgg                                                                                                                                              <  7:92933‑M1/8‑1 (MQ=255)          cTCGCTGGAAGCCTGCCCGGGCGCCACCGGGGCGATGTCGATGCCGACGAACTCGCTGACGTCCCAGGGCAGGGCGCCGGCTGCACCCGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGc                                                                                                                                          >  6:217889/1‑149 (MQ=255)              cTGGACGCCTGCCCGGGCGCCACCGGGGCGATGTCGATGCCGACGAACTCGCTGACGTCCCAGGGCAGGGCGCCGGCTGCACCCGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTc                                                                                                                                      <  5:340330/149‑1 (MQ=255)                ggAAGCCGGCCCGGGCGCCACCGGGGCGATGTCGATGCCGACGAACTCGCTGCCGGCCCAGGGCAGGGCGCCGGCTGCACCCGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTcca                                                                                                                                    <  8:273450/149‑1 (MQ=255)                   aGCCTGCCCGGGCGCCACCGGGGCGATGTCGATGCCGACGAACTCGCTGACGTCCCAGGGCAGGGCGCCGGCTGCACCCGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTccacca                                                                                                                                 <  5:217889/149‑1 (MQ=255)                   aGCCTGCCCGGGCGCCACCGGGGCGATGTCGATGCCGACGAACTCGCTGACGTCCCAGGGCAGGGCGCCGGCTGCACCCGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTccacca                                                                                                                                 <  5:14522/149‑1 (MQ=255)                     ccTGCCCGGGCGCCACCGGGGCGATGTCGATGCCGACGAACTCGCTGACGTCCCAGGGCAGGGCGCCGGCTGCACCCGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACcaca                                                                                                                               <  5:170889/149‑1 (MQ=255)                      cTGCCCGGGCGCCACCGGGGCGATGTCGATGCCGACGAACTCGCTGACGTCCCAGGGCAGGGCGCCGGCTGCACCCGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAg                                                                                                                              >  7:121290/1‑149 (MQ=255)                         cccGGGCGCCACCGGGGCGATGTCGATGCCGACGAACTCGCTGACGTCCCAGGGCAGGGCGCCGGCTGCACCCGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGcc                                                                                                                            >  2:312422/1‑148 (MQ=255)                                   aCCGGGGCGATGTCGATGCCGACGAACTCGCTGACGTCCCAGGGCAGGGCGCCGGCTGCACCCGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTgccgc                                                                                                                 <  4:349102/149‑1 (MQ=255)                                     ctgggcgtgagcattggtgatttcgtggccttcgacccattgcccgagttcaccgaaagcggccacatcagcgcccgtcacctggacgacaaggctggcgtagcggcattGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCa                                                                                                               >  3:314250‑M1/111‑149 (MQ=255)                                         gcgtgagcattggtgatttcgtggccttcgacccattgcccgagttcaccgaacgcggccacatcagcgcccgtcacctggacgacaaggctggcgtagcggcattGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCaa                                                                                                           >  4:218283‑M1/107‑149 (MQ=255)                                          cGATGTCGATGCCGACGAACTCGCTGACGTCCCAGGGCAGGGCGCCGGCTGCACCCGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAAt                                                                                                          <  6:382259/149‑1 (MQ=255)                                           gATGTCGATGCCGACGAACTCGCTGACGTCCCAGGGCAGGGCGCCGGCTGCACCCGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATg                                                                                                         >  6:181632/1‑149 (MQ=255)                                            aTGTCGATGCCGACGAACTCGCTGACGTCCCAGGGCAGGGCGCCGGCTGCACCCGAGCCGGACTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGc                                                                                                        >  6:47002/1‑149 (MQ=255)                                                  aTGCCGACGAACTCGCTGACGTCCCAGGGCAGGGCGCCGGCTGCACCCGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTggcg                                                                                                                                               >  3:92494/1‑104 (MQ=255)                                                  aTGCCGACGAACTCGCTGACGTCCCAGGGCAGGGCGCCGGCTGCACCCGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTggcg                                                                                                                                               <  4:92494/104‑1 (MQ=255)                                                     gtgatttcgtggccttcgacccattgcccgagttcaccgaaagcggccacatcagcgcccgtcacctggacgacaaggctggcgtagcggcattGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCa                                                                                                            >  2:56223‑M1/95‑136 (MQ=255)                                                     gtgatttcgtggccttcgacccattgcccgagttcaccgaaagcggccacatcagcgcccgtcacctggacgacaaggctggcgtagcggcattGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCa                                                                                                            <  1:56223‑M1/42‑1 (MQ=255)                                                     ccGACGAACTCGCTGACGTCCCAGGGCAGGGCGCCGGCTGCACCCGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGCCGCTACGc                                                                                                <  6:67315/148‑1 (MQ=255)                                                           aaCTCGCTGACGTCCCAGGGCAGGGCGCCGGCTGCACCCGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGCCGCTACGCCAGCCtt                                                                                         <  1:312422/149‑1 (MQ=255)                                                                      gTCCCAGGGCAGGGCGCCGGCTGCACCCGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTggc                                                                                                                                                >  7:351322/1‑83 (MQ=255)                                                                      gTCCCAGGGCAGGGCGCCGGCTGCACCCGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTggc                                                                                                                                                <  8:351322/83‑1 (MQ=255)                                                                        cccAGGGCAGGGCGCCGGCTGCACCCGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGCCGCTACGCCAGCCTTGTCGTCCAGGTGa                                                                            >  6:169261/1‑149 (MQ=255)                                                                         ccAGGGCAGGGCGCCGGCTGCACCCGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGCCGCTACGCCAGCCTTGTCGTCCAGGTGAc                                                                           >  8:17766/1‑149 (MQ=255)                                                                            gggcagggcGCCGGCTGCACCCGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGCCGCTACGCCAGCCTTGTCGTCCAGGTGACggg                                                                        >  8:92933/1‑149 (MQ=255)                                                                              gcagggcGCCGGCTGCACCCGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGCCGCTACGCCAGCCTTGTCGTCCAGGTg                                                                             <  5:241457/142‑1 (MQ=255)                                                                              gcagggcGCCGGCTGCACCCGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGCCGCTACGCCAGCCTTGTCGTCCAGGTg                                                                             >  6:241457/1‑142 (MQ=255)                                                                               cagggcGCCGGCTGCACCCGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGCCGCTACGCCAGCCTTGTCGTCCAGGTGACGGgcgc                                                                     >  2:339342/1‑149 (MQ=255)                                                                                agggcGCCGGCTGCACCCGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGCCGCTACGCCAGCCTTGTCGTCCAGGTGACGGGCGCt                                                                    <  3:49405/149‑1 (MQ=255)                                                                                agggcGCCGGCTGCACCCGAGCAGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGCCGCTACGCCAGCCTTGTCGTCCAGGTGACGGGCGCt                                                                    <  2:317603/149‑1 (MQ=255)                                                                                       cGGCTGCACCCGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGCCGCTACGCCAGCCTTGTCGTCCAGGTGACGGgcgc                                                                     >  5:372475/1‑141 (MQ=255)                                                                                       cGGCTGCACCCGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGCCGCTACGCCAGCCTTGTCGTCCAGGTGACGGgcgc                                                                     <  6:372475/141‑1 (MQ=255)                                                                                           tGCACCCGAGCCGGGCTCCGCGGTGATGGGGAACAGCGGGGGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGCCGCTACGCCAGCCTTGTCGTCCAGGTGACGGGCGCGGATGTGGCCGc                                                         <  2:372739/149‑1 (MQ=255)                                                                                              aCCCGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGCCGCTACGCCAGCCTTGTCGTCCAGGTGACGGGCGCTGATGTGGCCGCttt                                                      <  5:181632/149‑1 (MQ=255)                                                                                               cccGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGCCGCTACGCCAGCCTTGTCGTCCAGGTGACGGGCGCTGATGTGGCCGCTTTc                                                     >  1:47339/1‑149 (MQ=255)                                                                                                  gAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGCCGCTACGCCAGCCTTGTCGTCCAGGTGACGGGCGCTGATGTGGCCGCTTTCGGt                                                  <  1:339342/149‑1 (MQ=255)                                                                                                       ggTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGCCGCTACGCCAGCCTTGTCGTCCAGGTGACGGGCGCTGATGTGGCCGCTTTCGGTGAACt                                             >  3:91088/1‑149 (MQ=255)                                                                                                        gTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGCCGCTACGCCAGCCTTGTCGTCCAGGTGACGGGCGCTGATGTGGCCGCTTTCGGTGAACTc                                            >  5:16073/1‑149 (MQ=255)                                                                                                                       gTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGCCGCTACGCCAGCCTTGTCGTCCa                                                                                 <  5:240035/97‑1 (MQ=255)                                                                                                                       gTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGCCGCTACGCCAGCCTTGTCGTCCa                                                                                 >  6:240035/1‑97 (MQ=255)                                                                                                                       gTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGCCGCTACGCCAGCCTTGTCGTCCAGGTGACGGGCGCTGATGTGGCCGCTTTCGGTGAACTCGGGCAATGGGTCGat                             >  1:139606/1‑148 (MQ=255)                                                                                                                         gAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGCCGCTACGCCAGCCTTGTCGTCCAGGTGACGGGCGCTGATGTGGCCGc                                                         >  7:305489/1‑119 (MQ=255)                                                                                                                         gAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGCCGCTACGCCAGCCTTGTCGTCCAGGTGACGGGCGCTGATGTGGCCGc                                                         <  8:305489/119‑1 (MQ=255)                                                                                                                               cGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGCGCCGCCAGCAATGCCGCTACGCCAGCCTTGTCGTCCAGGTGACGGGCGCTGATGTGGCCGCTTTCg                                                    <  2:719/118‑1 (MQ=255)                                                                                                                               cGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGAGCCGCCAGCAATGCCGCTACGCCAGCCTTGTCGTCCAGGTGACGGGCGCTGATGTGGCCGCTTTCg                                                    >  1:719/1‑118 (MQ=255)                                                                                                                                      cAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGCCGCTACGCCAGCCTTGTCGTCCAGGTGACGGGCGCTGATGTGGCCGCTTTCGGTGAACTCGGGCAATGGGTCGAAGGCCACGAAATCAc               >  4:251034/1‑148 (MQ=255)                                                                                                                                       aGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGCCGCTACGCCAGCCTTGTCGTCCAGGTGACGGGCGCTGATGTGGCCGCTTTCGGTGAACTCGGGCAATGGGTCGAAGGCCACGAAATCAcc              >  2:3970/1‑148 (MQ=255)                                                                                                                                        gTCGATCAGCGGCTTGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGCCGGTACGCCAGCCTTGTCGTCCAGGTGACGGGCGCTGATGTGGCCGCTTTCGGTGAACTCGGGCAATGGGTCGAAGGCCACGAAATCACCaa            <  5:47002/149‑1 (MQ=255)                                                                                                                                             tCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGCCGCTACGCCAGCCTTGTCGTCCAGGTGACGGGCGCTGATGTGGCCGCTTTCGGTGAACTCGGGCAATGGGTCGAAGGCCACGAAATCACCAATGCt        >  2:138054/1‑148 (MQ=255)                                                                                                                                              cAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGCCGCTACGCCAGCCTTGTCGTCCAGGTGACGGGCGCTGATGTGGCCGCTTTCGGTGAACTCGGGCAATGGGTCGAAGGCCACGAAATCACCACTGCTCa      >  5:260132/1‑149 (MQ=255)                                                                                                                                                  ggCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGCCGCTACGCCAGCCTTGTCGTCCAGGTGACGGGCGCTGATGTGGCCGCTTTCGGTGAACTCGGGCAATGGGTCGAAGGCCACGAAATCACCAATGCTCACGcc  >  2:377778/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                    GACCGCATGCTCGCTGGAAGCCTGCCCGGGCGCCACCGGGGCGATGTCGATGCCGACGAACTCGCTGACGTCCCAGGGCAGGGCGCCGGCTGCACCCGAGCCGGTCTCCTCGGTGATGGTGAACAGCGGGTGGCAGTCGATCAGCGGCTGGCGGCCGCTTTCCACCACAGCCTTCAGTGCCGCCAGCAATGCCGCTACGCCAGCCTTGTCGTCCAGGTGACGGGCGCTGATGTGGCCGCTTTCGGTGAACTCGGGCAATGGGTCGAAGGCCACGAAATCACCAATGCTCACGCC  >  NC_002947/1946957‑1947250

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.