BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2069173	78 (1.260)	4 (0.070)	3/244	NT	5.0%	intergenic (+20/‑454)	PP_t19/PP_1846	tRNA‑Ser/group II intron‑encoding maturase
*	?	NC_002947	= 2069185	80 (1.410)	4 (0.070)	3/244	NT	5.0%	intergenic (+32/‑442)	PP_t19/PP_1846	tRNA‑Ser/group II intron‑encoding maturase

Only 100 of 112 total aligned reads displayed.

CGCACCTCGACAGGCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAG  >  NC_002947/2069029‑2069321

cgcACCTCGACAGGCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCt                                                                                                                                                  >  7:251609/1‑149 (MQ=255)

cgcACCTCGACAGGCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCt                                                                                                                                                  <  6:194909/149‑1 (MQ=255)

        gACAGGCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTa                                                                                                                                          >  1:290268/1‑149 (MQ=255)

           aGGCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTAcgg                                                                                                                                       <  8:182384‑M2/149‑4 (MQ=255)

             gCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCATATCCCTTCTTCACCGCCACAGTCTACGAAAAGCCCCCGCGCTGAAAAGTAagggg                                                                                                                                     <  8:260034‑M2/149‑6 (MQ=255)

             gCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTAcgggg                                                                                                                                     <  8:260028‑M2/149‑6 (MQ=255)

             gCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTAcgggg                                                                                                                                     <  8:163413‑M2/149‑6 (MQ=255)

             gCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTAcgggg                                                                                                                                     >  5:13062‑M2/1‑144 (MQ=255)

              ccGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACAAAAAGCCCCCGtacttttcagcgcggggg                                                                                                                                    <  2:335826‑M1/149‑19 (MQ=255)

                gCAAGGCTTGAAGAGAAACGGTGAAGTCTCCCAGTGTTCGAAGGAGCACGCCTGGAAACTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCACTTCTTCACCGCCACATTCTACGAAAAGACCCCGCGCTGAAAAGTAcgtgggct                                                                                                                                  <  2:243805‑M2/149‑9 (MQ=255)

                gCAAGGCTTGAAGAGAAACGGTCAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTAcgggggct                                                                                                                                  <  7:59462‑M2/149‑9 (MQ=255)

                   aGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTAcgggggctttt                                                                                                                               >  7:189615‑M2/1‑138 (MQ=255)

                    ggCTTGAAGAGACACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCttttt                                                                                                                              <  8:236849/149‑1 (MQ=255)

                    ggCTTGAAGAGAAACGGTGAAGTGTCAGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCTCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTTCGGGGGCttttt                                                                                                                              <  6:186976/149‑1 (MQ=255)

                               aaaCGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAg                                                                                                                   >  2:100/1‑149 (MQ=255)

                                 aCGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAGTCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGTACTTTTCAGCGcgggggcttttcgtagaatgtggcg                                                                                                                 >  8:203894‑M2/1‑124 (MQ=255)

                                  cGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCa                                                                                                                >  5:355646/1‑149 (MQ=255)

                                    gTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATg                                                                                                              <  2:340672/149‑1 (MQ=255)

                                               gAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTgcgc                                                                                                   <  3:17316/149‑1 (MQ=255)

                                                   ggTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTgcgc                                                                                                   <  3:30409/145‑1 (MQ=255)

                                                   ggTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTgcgc                                                                                                   >  4:30409/1‑145 (MQ=255)

                                                    gTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAg                                                                                              >  2:177413/1‑149 (MQ=255)

                                                    gTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAg                                                                                              >  8:20555/1‑149 (MQ=255)

                                                       gAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAgcg                                                                                            >  7:311643/1‑148 (MQ=255)

                                                       gAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAgcg                                                                                            >  2:220157/1‑148 (MQ=255)

                                                          ggAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCTTACGCGCAAc                                                                                        <  8:205153/149‑1 (MQ=255)

                                                              cACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGATGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGc                                                                                    <  7:251717/149‑1 (MQ=255)

                                                               aCGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCt                                                                                   >  8:348623/1‑149 (MQ=255)

                                                                cGCCTGGAAAGTGTGTATACGAGAAAGCGTATCAAGGCTTCAAATCCCTTCTTCCCCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCtt                                                                                  <  2:92322/149‑1 (MQ=255)

                                                                 gCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTg                                                                                 >  5:128691/1‑149 (MQ=255)

                                                                   cTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGt                                                                               >  7:37746/1‑149 (MQ=255)

                                                                    tGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGtt                                                                              >  4:244501/1‑149 (MQ=255)

                                                                      gAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCACCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCCACCCGCTTGGTtgt                                                                            >  6:394366/1‑149 (MQ=255)

                                                                       aaaGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTtgtg                                                                           <  1:153191/149‑1 (MQ=255)

                                                                             tgtATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGc                                                                      <  3:39069/148‑1 (MQ=255)

                                                                             tgtATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGc                                                                      <  7:113110/148‑1 (MQ=255)

                                                                                 taCGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGt                                                                 <  7:163413/149‑1 (MQ=255)

                                                                                 taCGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGt                                                                 <  1:327130/149‑1 (MQ=255)

                                                                                 taCGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGt                                                                 >  1:2902/1‑149 (MQ=255)

                                                                                  aCGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTAcgggg                                                                                                                                     <  3:341606‑M2/80‑6 (MQ=255)

                                                                                  aCGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTAcgggg                                                                                                                                     >  4:341606‑M2/1‑75 (MQ=255)

                                                                                   cGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTgg                                                               <  1:100/149‑1 (MQ=255)

                                                                                    gagaAATCGTATCATGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGTGGCTTTTTGTGTGCTCCAGGCATGGCGCGTTGCGCGTAAGCGCAAACCGCTTGGTTGTGGGGGCCAAGTgtg                                                              <  7:260034/149‑3 (MQ=37)

                                                                                    gagaAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTggg                                                              <  7:260028/149‑1 (MQ=255)

                                                                                     agaAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGt                                                             <  2:290268/149‑1 (MQ=255)

                                                                                     agaAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGt                                                             <  6:137429/149‑1 (MQ=255)

                                                                                      gaAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTgc                                                                                                     >  1:86410/1‑108 (MQ=255)

                                                                                      gaAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGt                                                             <  8:257023/148‑1 (MQ=255)

                                                                                             tATCAAGGGTTCAAATCCCTTCTTCACCGCCAGATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGTTGGCCAAGTGTGTGACTTGGa                                                     <  2:42635/149‑1 (MQ=255)

                                                                                             tATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGa                                                     <  5:361395/149‑1 (MQ=255)

                                                                                                 aaGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTaa                                                                                               <  2:378988/103‑1 (MQ=255)

                                                                                                 aaGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGt                                                  >  2:362785/1‑148 (MQ=255)

                                                                                                 aaGGGTTCAAATCCATTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGt                                                  <  6:4543/148‑1 (MQ=255)

                                                                                                    ggTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGaaa                                              <  2:68279/149‑1 (MQ=255)

                                                                                                    ggTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGaaa                                              <  7:20555/149‑1 (MQ=255)

                                                                                                      ttCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGt                                            >  7:217105/1‑149 (MQ=255)

                                                                                                          aaTCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGTGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAATTGGGTGACTTGGAGGTGAAAGTCctc                                        <  2:69657/149‑1 (MQ=255)

                                                                                                          aaTCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCctc                                        <  7:348623/149‑1 (MQ=255)

                                                                                                          aaTCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCct                                         >  6:88657/1‑148 (MQ=255)

                                                                                                           aTCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTaa                                                                                               >  3:138852/1‑93 (MQ=255)

                                                                                                           aTCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTaa                                                                                               <  4:138852/93‑1 (MQ=255)

                                                                                                            tCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTa                                      <  6:79854/149‑1 (MQ=255)

                                                                                                              ccTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTaca                                    <  1:177413/149‑1 (MQ=255)

                                                                                                                  cttcACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTacacac                                 <  1:362785/148‑1 (MQ=255)

                                                                                                                   ttcACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACAccc                               >  4:38530/1‑149 (MQ=255)

                                                                                                                   ttcACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGCGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACAccc                               >  1:368561/1‑149 (MQ=255)

                                                                                                                     cACCGGCACATTCTACGAATAGCCCCCGCGCTGAAAAGTACGGGTGCTTTTTGTGTGCGCCAGGGATGGCGCGTTGCTCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTTGAGGTGAAAGTCCTCTACACACCCg                              <  1:243805/148‑1 (MQ=18)

                                                                                                                        cGCCACATTCTACGAAAAGCCCCCGcgctgaaaagtacgggggcttttcgtagaatgtggcggtgaagaagggatttgaacccttgatacgacttctcgtatacacactttccaggcgtgctccttcgaccactcggacacttcaccgt                          >  8:203894‑M1/1‑25 (MQ=255)

                                                                                                                        cGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCaa                          <  6:122754/149‑1 (MQ=255)

                                                                                                                         gCCACATTCTACGAAAAGCCCCCGtacttttcagcgcggggg                                                                                                                                    >  5:17746‑M1/1‑24 (MQ=255)

                                                                                                                         gCCACATTCTACGAAAAGCCCCCGtacttttcagcgcggggg                                                                                                                                    <  6:17746‑M1/42‑19 (MQ=255)

                                                                                                                                 cTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAgtg                 >  7:251913/1‑149 (MQ=255)

                                                                                                                                  tACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGt                                                             >  6:4130/1‑104 (MQ=255)

                                                                                                                                  tACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGt                                                             <  5:4130/104‑1 (MQ=255)

                                                                                                                                    cGAAAAGCCCCCGCGCTGAAAAGTACGGGGGGTTTTTGTGTGGGCCGGGATTGCCGCGTTGGGCGTATGGGCAACCGGGTTGGTTGTGGTGGCCAGGTGGGTGAGTTGGGGGTGAAGGTCGTCTACACACCCGGCAAGGGGAGgtgt                >  8:213846/1‑147 (MQ=255)

                                                                                                                                    cGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAgtgt                >  4:368852/1‑147 (MQ=255)

                                                                                                                                    cGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGtt               <  5:88657/148‑1 (MQ=255)

                                                                                                                                     gAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAg             >  5:58482/1‑149 (MQ=255)

                                                                                                                                      aaaaGCCCCCGtacttttcagcgcgggggcttttcgtagaatgtggcggtgaagaagggatttgaacccttgatacgatttctcgtatacacactttccaggcgtgctccttcgaccactcggacacttcaccgtttctcttcaagcct            >  7:189615‑M1/1‑11 (MQ=255)

                                                                                                                                      aaaaGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTg                                                       <  6:112570/106‑1 (MQ=255)

                                                                                                                                      aaaaGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTg                                                       >  5:112570/1‑106 (MQ=255)

                                                                                                                                         aGCCCCCGtacttttcagcgcgggggcttttcgtagaatgtggcggtgaagaagggatttgaacccttgatacgatttctcgtatacacactttccaggcgtgctccttcgaccactcggacacttgaccgtttctcttcaagccttgc         <  7:59462‑M1/149‑142 (MQ=255)

                                                                                                                                         aGCCCACGtacttttcagcgcggggtcttttcgtagaatgtggcggtgaagaagtgatttgaacccttgatacgatttctcgtatacacagtttccaggcgtgctccttcgaacactgggagacttcaccgtttctcttcaagccttgc         <  2:243805‑M1/149‑142 (MQ=255)

                                                                                                                                          gCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCATGGGGAAGTGTTAGCCGGa        <  3:278905/149‑1 (MQ=255)

                                                                                                                                          gCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGa        <  7:13279/149‑1 (MQ=255)

                                                                                                                                          gCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGa        <  2:2902/149‑1 (MQ=255)

                                                                                                                                           cccccGCGCTGAAAAGTAcgggggctttttgtagaatgtggcggtgaagaagggatttgaacccttgatacgatttctcgtatacacactttccaggcgtgctccttcgaccactcggacacttcaccgtttctcttcaagccttgcgg       <  2:335826‑M2/149‑132 (MQ=255)

                                                                                                                                           cccccGCGCTGAAAAGTAcgggggcttttcgtagaatgtggc                                                                                                                  <  6:17746‑M2/42‑25 (MQ=255)

                                                                                                                                           cccccGCGCTGAAAAGTAcgggggcttttcgtagaatgtggc                                                                                                                  >  5:17746‑M2/1‑18 (MQ=255)

                                                                                                                                           cccccGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAg       <  8:37746/149‑1 (MQ=255)

                                                                                                                                            ccccTtacttttcagcgcgggggcttttcgtagactgtggcggtgaagaagggatatgaacccttgatacgatttctcgtatacacactttccaggcgtgctccttcgaccactcggacacttcaccgtttctcttcaagccttgcggc      <  8:260034‑M1/149‑145 (MQ=255)

                                                                                                                                            ccccGtacttttcagcgcgggggcttttcgtagaatgtggcggtgaagaagggatttgaacccttgatacgatttctcgtatacacactttccaggcgtgctccttcgaccactcggacacttcaccgtttctcttcaagccttgcggc      <  8:260028‑M1/149‑145 (MQ=255)

                                                                                                                                            ccccGtacttttcagcgcgggggcttttcgtagaatgtggcggtgaagaagggatttgaacccttgatacgatttctcgtatacacactttccaggcgtgctccttcgaccactcggacacttcaccgtttctcttcaagccttgcggc      >  5:13062‑M1/1‑5 (MQ=255)

                                                                                                                                            ccccGtacttttcagcgcgggggcttttcgtagaatgtggcggtgaagaagggatttgaacccttgatacgatttctcgtatacacactttccaggcgtgctccttcgaccactcggacacttcaccgtttctcttcaagccttgcggc      <  8:163413‑M1/149‑145 (MQ=255)

                                                                                                                                            ccccGtacttttcagcgcgggggcttttcgtagaatgtggcggtgaagaagggatttgaacccttgatacgatttctcgt                                                                           <  3:341606‑M1/80‑76 (MQ=255)

                                                                                                                                            ccccGtacttttcagcgcgggggcttttcgtagaatgtggcggtgaagaagggatttgaacccttgatacgatttctcgt                                                                           >  4:341606‑M1/1‑5 (MQ=255)

                                                                                                                                             cccGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACtt                                                        >  8:22906/1‑98 (MQ=255)

                                                                                                                                             cccGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACtt                                                        <  7:22906/98‑1 (MQ=255)

                                                                                                                                             cccGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAgg      >  4:76366/1‑148 (MQ=255)

                                                                                                                                                gcgcTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAg  <  8:311643/149‑1 (MQ=255)

CGCACCTCGACAGGCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAG  >  NC_002947/2069029‑2069321

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.